RNA–Protein interactions for RNA: ENSMUST00000036992.8

Lmo1-201, Transcript of Rhombotin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lmo1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo1-201ENSMUST00000036992 Romo1P60603 79 aa6.64□□□□□ -1.35
Lmo1-201ENSMUST00000036992 Sox16Q62247 57 aa6.61□□□□□ -1.35
Lmo1-201ENSMUST00000036992 Gm11568A2A4M2 211 aa6.6□□□□□ -1.35
Lmo1-201ENSMUST00000036992 Krtap9-1Q64526 186 aa6.6□□□□□ -1.35
Lmo1-201ENSMUST00000036992 Gm11554B1AQB2 190 aa6.55□□□□□ -1.36
Lmo1-201ENSMUST00000036992 Gm3646F6S692 53 aa6.51□□□□□ -1.37
Lmo1-201ENSMUST00000036992 A030005L19RikA0A1Y7VIU2 113 aa6.5□□□□□ -1.37
Lmo1-201ENSMUST00000036992 Gm4553A0A1B0GSA9 284 aa6.49□□□□□ -1.37
Lmo1-201ENSMUST00000036992 Macf1Q9QXZ0 7354 aaKnown RBP6.47□□□□□ -1.37
Lmo1-201ENSMUST00000036992 Kmt2dQ6PDK2 5588 aa6.46□□□□□ -1.38
Lmo1-201ENSMUST00000036992 Lce1fB9EJP6 147 aa6.39□□□□□ -1.39
Lmo1-201ENSMUST00000036992 Lce1cQ9D1C5 147 aa6.39□□□□□ -1.39
Lmo1-201ENSMUST00000036992 Gm2431E9Q8S1 172 aa6.32□□□□□ -1.4
Lmo1-201ENSMUST00000036992 A0A1Y7VLE6 161 aa6.3□□□□□ -1.4
Lmo1-201ENSMUST00000036992 Krtap28-13A0A087WQP5 138 aa6.29□□□□□ -1.4
Lmo1-201ENSMUST00000036992 Gm11639A0A1D5RLM8 5808 aa6.29□□□□□ -1.4
Lmo1-201ENSMUST00000036992 SvipQ3UZP4 77 aa6.27□□□□□ -1.41
Lmo1-201ENSMUST00000036992 A030005K14RikA0A1Y7VNY1 122 aa6.25□□□□□ -1.41
Lmo1-201ENSMUST00000036992 Tnp1P10856 55 aa6.25□□□□□ -1.41
Lmo1-201ENSMUST00000036992 Pcp4P63054 62 aa6.25□□□□□ -1.41
Lmo1-201ENSMUST00000036992 Gm45337A0A1B0GS71 263 aa6.24□□□□□ -1.41
Lmo1-201ENSMUST00000036992 Krtap28-10A0A1Y7VP58 119 aa6.2□□□□□ -1.42
Lmo1-201ENSMUST00000036992 Gm11938Q9D3H4 131 aa6.18□□□□□ -1.42
Lmo1-201ENSMUST00000036992 Mt1P02802 61 aaKnown RBP6.15□□□□□ -1.42
Lmo1-201ENSMUST00000036992 Gm10153A0A1B0GRL1 320 aa6.13□□□□□ -1.43
Lmo1-201ENSMUST00000036992 Krtap19-4Q925H7 84 aa6.08□□□□□ -1.44
Lmo1-201ENSMUST00000036992 Muc19Q6PZE0 7524 aa6.07□□□□□ -1.44
Lmo1-201ENSMUST00000036992 Hmcn1D3YXG0 5634 aa6.07□□□□□ -1.44
Lmo1-201ENSMUST00000036992 Gm10337F7DEP7 55 aa6.03□□□□□ -1.44
Lmo1-201ENSMUST00000036992 Gm40460A0A1B0GR10 244 aa6.02□□□□□ -1.45
Lmo1-201ENSMUST00000036992 Gm7579A0A1B0GRJ4 243 aa6.02□□□□□ -1.45
Lmo1-201ENSMUST00000036992 Gm40193A0A1B0GT39 78 aa6.02□□□□□ -1.45
Lmo1-201ENSMUST00000036992 Krtap5-5Q2TA51 241 aa6.02□□□□□ -1.45
Lmo1-201ENSMUST00000036992 Krtap5-4Q62220 223 aa6.02□□□□□ -1.45
Lmo1-201ENSMUST00000036992 Lce3cQ91V05 98 aa5.99□□□□□ -1.45
Lmo1-201ENSMUST00000036992 Gpr98Q8VHN7 6298 aaKnown RBP5.9□□□□□ -1.46
Lmo1-201ENSMUST00000036992 Gm39115A0A1B0GSH7 232 aa5.9□□□□□ -1.46
Lmo1-201ENSMUST00000036992 Lce3dE9Q8V1 98 aa5.89□□□□□ -1.47
Lmo1-201ENSMUST00000036992 DstQ91ZU6 7393 aaKnown RBP5.82□□□□□ -1.48
Lmo1-201ENSMUST00000036992 ObscnA2AAJ9 8891 aaKnown RBP5.75□□□□□ -1.49
Lmo1-201ENSMUST00000036992 A0A1Y7VJ07 166 aa5.75□□□□□ -1.49
Lmo1-201ENSMUST00000036992 Lce3eF8VQJ0 98 aa5.72□□□□□ -1.49
Lmo1-201ENSMUST00000036992 Lce3fQ6PAI4 98 aa5.72□□□□□ -1.49
Lmo1-201ENSMUST00000036992 A030014E15RikA0A1Y7VJV2 120 aa5.67□□□□□ -1.5
Lmo1-201ENSMUST00000036992 Mt3P28184 68 aa5.66□□□□□ -1.5
Lmo1-201ENSMUST00000036992 Gm7544A0A1Y7VJ58 118 aa5.61□□□□□ -1.51
Lmo1-201ENSMUST00000036992 NebE9Q1W3 7152 aa5.59□□□□□ -1.51
Lmo1-201ENSMUST00000036992 Krtap4-16Q91W93 202 aa5.54□□□□□ -1.52
Lmo1-201ENSMUST00000036992 4933428G20RikQ9D3X4 101 aa5.51□□□□□ -1.53
Lmo1-201ENSMUST00000036992 Sprr2fO70557 76 aa5.5□□□□□ -1.53
Lmo1-201ENSMUST00000036992 Gm45618A0A1B0GSA0 219 aa5.48□□□□□ -1.53
Lmo1-201ENSMUST00000036992 Sprr2dO70555 85 aa5.47□□□□□ -1.53
Lmo1-201ENSMUST00000036992 Lce3aQ497I5 98 aa5.47□□□□□ -1.53
Lmo1-201ENSMUST00000036992 AhnakE9Q616 5656 aaKnown RBP5.47□□□□□ -1.53
Lmo1-201ENSMUST00000036992 Gm10100J3QK64 120 aa5.38□□□□□ -1.55
Lmo1-201ENSMUST00000036992 Krtap31-2Q8CAY5 177 aa5.34□□□□□ -1.55
Lmo1-201ENSMUST00000036992 Mp68P56379 58 aa5.32□□□□□ -1.56
Lmo1-201ENSMUST00000036992 Sprr2eO70556 76 aa5.02□□□□□ -1.61
Lmo1-201ENSMUST00000036992 Gm20538F6Z9R1 75 aa5□□□□□ -1.61
Lmo1-201ENSMUST00000036992 Gm10142J3KMP7 120 aa4.87□□□□□ -1.63
Lmo1-201ENSMUST00000036992 Gm10024A0A0A0MQA4 119 aa4.85□□□□□ -1.63
Lmo1-201ENSMUST00000036992 Krtap31-1Q9D644 177 aa4.78□□□□□ -1.64
Lmo1-201ENSMUST00000036992 Sprr2hO70559 108 aa4.73□□□□□ -1.65
Lmo1-201ENSMUST00000036992 A0A286YCP9 139 aa4.63□□□□□ -1.67
Lmo1-201ENSMUST00000036992 A030003K21RikA0A1Y7VIM3 128 aa4.58□□□□□ -1.68
Lmo1-201ENSMUST00000036992 Muc16A0A140LJ72 8478 aa4.52□□□□□ -1.69
Lmo1-201ENSMUST00000036992 Gm29735A0A1B0GT06 219 aa4.43□□□□□ -1.7
Lmo1-201ENSMUST00000036992 Gm6217A0A1Y7VJK9 128 aa4.42□□□□□ -1.7
Lmo1-201ENSMUST00000036992 1110025L11RikO09048 78 aa4.41□□□□□ -1.7
Lmo1-201ENSMUST00000036992 Krtap6-5Q925H3 78 aa4.41□□□□□ -1.7
Lmo1-201ENSMUST00000036992 Gm11567Q9D141 195 aa4.22□□□□□ -1.73
Lmo1-201ENSMUST00000036992 Gm10229O08631 77 aa3.96□□□□□ -1.78
Lmo1-201ENSMUST00000036992 Ndufaf8A2AMZ4 74 aa3.81□□□□□ -1.8
Lmo1-201ENSMUST00000036992 Gm9112A2AI92 75 aa3.63□□□□□ -1.83
Lmo1-201ENSMUST00000036992 Krtap21-1Q925H4 128 aa3.56□□□□□ -1.84
Lmo1-201ENSMUST00000036992 Krtap6-2O08884 159 aa3.52□□□□□ -1.85
Lmo1-201ENSMUST00000036992 Sprr2bO70554 98 aa3.49□□□□□ -1.85
Lmo1-201ENSMUST00000036992 Krtap5-1Q64507 230 aa3.37□□□□□ -1.87
Lmo1-201ENSMUST00000036992 Phgr1Q8K0G7 91 aa2.85□□□□□ -1.95
Lmo1-201ENSMUST00000036992 Gm4559A4IF42 199 aa2.58□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 172.1 ms