RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Vps13bQ80TY5 3993 aa2.3□□□□□ -2.04
Clk1-201ENSMUST00000034868 Krtap6-3A0A087WQL6 57 aa2.3□□□□□ -2.04
Clk1-201ENSMUST00000034868 Gpr98Q8VHN7 6298 aaKnown RBP2.29□□□□□ -2.04
Clk1-201ENSMUST00000034868 Pkhd1l1Q80ZA4 4249 aa2.28□□□□□ -2.04
Clk1-201ENSMUST00000034868 Lrp2A2ARV4 4660 aa2.27□□□□□ -2.05
Clk1-201ENSMUST00000034868 Gm11564A2A4L9 201 aa2.27□□□□□ -2.05
Clk1-201ENSMUST00000034868 Rps29P62274 56 aa2.27□□□□□ -2.05
Clk1-201ENSMUST00000034868 4933428G20RikQ9D3X4 101 aa2.27□□□□□ -2.05
Clk1-201ENSMUST00000034868 SspoQ8CG65 4998 aa2.27□□□□□ -2.05
Clk1-201ENSMUST00000034868 Gm40460A0A1B0GR10 244 aa2.26□□□□□ -2.05
Clk1-201ENSMUST00000034868 Fat2Q5F226 4351 aa2.25□□□□□ -2.05
Clk1-201ENSMUST00000034868 Rnf213E9Q555 5152 aaKnown RBP2.25□□□□□ -2.05
Clk1-201ENSMUST00000034868 Gm10061D3Z714 54 aa2.25□□□□□ -2.05
Clk1-201ENSMUST00000034868 Krtap13-1Q8K198 168 aa2.25□□□□□ -2.05
Clk1-201ENSMUST00000034868 Dnah5Q8VHE6 4621 aa2.24□□□□□ -2.05
Clk1-201ENSMUST00000034868 Fsip2A2ARZ3 6995 aa2.24□□□□□ -2.05
Clk1-201ENSMUST00000034868 Sprr2a3Q4KL71 83 aa2.23□□□□□ -2.05
Clk1-201ENSMUST00000034868 Sprr2a1Q9CQK8 83 aa2.23□□□□□ -2.05
Clk1-201ENSMUST00000034868 Muc5bE9Q5I3 4800 aa2.23□□□□□ -2.05
Clk1-201ENSMUST00000034868 Dync1h1Q9JHU4 4644 aaKnown RBP2.23□□□□□ -2.05
Clk1-201ENSMUST00000034868 Pkhd1E9PZ36 4059 aa2.23□□□□□ -2.05
Clk1-201ENSMUST00000034868 Lrp1bQ9JI18 4599 aa2.22□□□□□ -2.05
Clk1-201ENSMUST00000034868 Gm17402F6Z0L5 76 aa2.21□□□□□ -2.06
Clk1-201ENSMUST00000034868 Gm11639A0A1D5RLM8 5808 aa2.19□□□□□ -2.06
Clk1-201ENSMUST00000034868 Lrp1Q91ZX7 4545 aaKnown RBP2.16□□□□□ -2.06
Clk1-201ENSMUST00000034868 Fat3Q8BNA6 4555 aa2.15□□□□□ -2.07
Clk1-201ENSMUST00000034868 Tnp1P10856 55 aa2.13□□□□□ -2.07
Clk1-201ENSMUST00000034868 ZanO88799 5376 aa2.12□□□□□ -2.07
Clk1-201ENSMUST00000034868 Krtap20-2E9Q0A8 60 aa2.1□□□□□ -2.07
Clk1-201ENSMUST00000034868 Crct1Q6PAI5 102 aa2.09□□□□□ -2.07
Clk1-201ENSMUST00000034868 Fat1A0A1L1SQU7 4645 aa2.09□□□□□ -2.08
Clk1-201ENSMUST00000034868 BC029722A0A0N4SW31 51 aa2.08□□□□□ -2.08
Clk1-201ENSMUST00000034868 Macf1Q9QXZ0 7354 aaKnown RBP2.08□□□□□ -2.08
Clk1-201ENSMUST00000034868 Mdn1A2ANY6 5589 aaKnown RBP2.05□□□□□ -2.08
Clk1-201ENSMUST00000034868 DstQ91ZU6 7393 aaKnown RBP2.05□□□□□ -2.08
Clk1-201ENSMUST00000034868 Mt4P47945 62 aa2.05□□□□□ -2.08
Clk1-201ENSMUST00000034868 Sprr2kO70562 68 aa2.03□□□□□ -2.08
Clk1-201ENSMUST00000034868 2310046K23RikA0A0A6YVW6 87 aa2.02□□□□□ -2.09
Clk1-201ENSMUST00000034868 Krtap19-5O08632 62 aa1.99□□□□□ -2.09
Clk1-201ENSMUST00000034868 Lce3dE9Q8V1 98 aa1.98□□□□□ -2.09
Clk1-201ENSMUST00000034868 Lce3aQ497I5 98 aa1.98□□□□□ -2.09
Clk1-201ENSMUST00000034868 Kmt2dQ6PDK2 5588 aa1.97□□□□□ -2.09
Clk1-201ENSMUST00000034868 Sprr2gO70558 76 aa1.94□□□□□ -2.1
Clk1-201ENSMUST00000034868 Sprr2iO70560 76 aa1.93□□□□□ -2.1
Clk1-201ENSMUST00000034868 Krtap6-5Q925H3 78 aa1.92□□□□□ -2.1
Clk1-201ENSMUST00000034868 Muc19Q6PZE0 7524 aa1.87□□□□□ -2.11
Clk1-201ENSMUST00000034868 Spink7Q6IE32 76 aa1.86□□□□□ -2.11
Clk1-201ENSMUST00000034868 Krtap16-3Q8C1I6 86 aa1.81□□□□□ -2.12
Clk1-201ENSMUST00000034868 Sprr2fO70557 76 aa1.8□□□□□ -2.12
Clk1-201ENSMUST00000034868 Krtap19-1Q925H2 87 aa1.8□□□□□ -2.12
Clk1-201ENSMUST00000034868 Lce3fQ6PAI4 98 aa1.79□□□□□ -2.12
Clk1-201ENSMUST00000034868 Lce3cQ91V05 98 aa1.79□□□□□ -2.12
Clk1-201ENSMUST00000034868 NebE9Q1W3 7152 aa1.77□□□□□ -2.13
Clk1-201ENSMUST00000034868 Krtap8-1O08633 61 aa1.76□□□□□ -2.13
Clk1-201ENSMUST00000034868 Gm10024A0A0A0MQA4 119 aa1.72□□□□□ -2.13
Clk1-201ENSMUST00000034868 Krtap4-16Q91W93 202 aa1.72□□□□□ -2.13
Clk1-201ENSMUST00000034868 Gm11938Q9D3H4 131 aa1.7□□□□□ -2.14
Clk1-201ENSMUST00000034868 Sprr2dO70555 85 aa1.69□□□□□ -2.14
Clk1-201ENSMUST00000034868 Gm10229O08631 77 aa1.68□□□□□ -2.14
Clk1-201ENSMUST00000034868 Krtap19-9bQ99NG9 58 aa1.68□□□□□ -2.14
Clk1-201ENSMUST00000034868 Krtap19-9aF8WH65 55 aa1.67□□□□□ -2.14
Clk1-201ENSMUST00000034868 Sprr2eO70556 76 aa1.64□□□□□ -2.15
Clk1-201ENSMUST00000034868 AhnakE9Q616 5656 aaKnown RBP1.59□□□□□ -2.15
Clk1-201ENSMUST00000034868 Krtap6-2O08884 159 aa1.57□□□□□ -2.16
Clk1-201ENSMUST00000034868 Krtap19-4Q925H7 84 aa1.57□□□□□ -2.16
Clk1-201ENSMUST00000034868 Krtap19-2Q925I0 141 aa1.53□□□□□ -2.16
Clk1-201ENSMUST00000034868 Sprr2hO70559 108 aa1.5□□□□□ -2.17
Clk1-201ENSMUST00000034868 Lce3eF8VQJ0 98 aa1.47□□□□□ -2.17
Clk1-201ENSMUST00000034868 Gm6358A0A087WPH4 74 aa1.45□□□□□ -2.18
Clk1-201ENSMUST00000034868 Krtap22-2J3QNX6 67 aa1.45□□□□□ -2.18
Clk1-201ENSMUST00000034868 Mt2P02798 61 aa1.44□□□□□ -2.18
Clk1-201ENSMUST00000034868 Lce3bQ9CQM7 98 aa1.42□□□□□ -2.18
Clk1-201ENSMUST00000034868 Syne1Q6ZWR6 8799 aa1.33□□□□□ -2.2
Clk1-201ENSMUST00000034868 ObscnA2AAJ9 8891 aaKnown RBP1.27□□□□□ -2.21
Clk1-201ENSMUST00000034868 1110025L11RikO09048 78 aa1.13□□□□□ -2.23
Clk1-201ENSMUST00000034868 Krtap21-1Q925H4 128 aa1.13□□□□□ -2.23
Clk1-201ENSMUST00000034868 Mt1P02802 61 aaKnown RBP1.11□□□□□ -2.23
Clk1-201ENSMUST00000034868 Sprr2bO70554 98 aa0.99□□□□□ -2.25
Clk1-201ENSMUST00000034868 Muc16A0A140LJ72 8478 aa0.89□□□□□ -2.27
Clk1-201ENSMUST00000034868 Phgr1Q8K0G7 91 aa0.88□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 8.6 ms