RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Krtap4-8B1AQA8 209 aa4.3□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Kiaa1109A2AAE1 5005 aa4.28□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Krtap4-7Q9D732 168 aa4.28□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Krtap4-9B1AQA9 244 aa4.25□□□□□ -1.73
Col4a1-201ENSMUST00000033898 Gm11562A0PK51 136 aa4.22□□□□□ -1.73
Col4a1-201ENSMUST00000033898 Krtap4-13Q9D7P3 165 aa4.21□□□□□ -1.74
Col4a1-201ENSMUST00000033898 Lce1kJ3QP15 125 aa4.17□□□□□ -1.74
Col4a1-201ENSMUST00000033898 Birc6O88738 4882 aa4.15□□□□□ -1.74
Col4a1-201ENSMUST00000033898 Krtap4-16Q91W93 202 aa4.09□□□□□ -1.75
Col4a1-201ENSMUST00000033898 Mdn1A2ANY6 5589 aaKnown RBP4.09□□□□□ -1.76
Col4a1-201ENSMUST00000033898 Gm11938Q9D3H4 131 aa4.08□□□□□ -1.76
Col4a1-201ENSMUST00000033898 Lce1a1Q9CQH5 143 aa4.03□□□□□ -1.76
Col4a1-201ENSMUST00000033898 Mt3P28184 68 aa4.02□□□□□ -1.77
Col4a1-201ENSMUST00000033898 Sprr2bO70554 98 aa3.99□□□□□ -1.77
Col4a1-201ENSMUST00000033898 ZanO88799 5376 aa3.97□□□□□ -1.77
Col4a1-201ENSMUST00000033898 Hmcn2A2AJ76 5100 aa3.96□□□□□ -1.78
Col4a1-201ENSMUST00000033898 Fsip2A2ARZ3 6995 aa3.95□□□□□ -1.78
Col4a1-201ENSMUST00000033898 Syne1Q6ZWR6 8799 aa3.93□□□□□ -1.78
Col4a1-201ENSMUST00000033898 Syne2Q6ZWQ0 6874 aaKnown RBP3.93□□□□□ -1.78
Col4a1-201ENSMUST00000033898 Ubr4A2AN08 5180 aa3.87□□□□□ -1.79
Col4a1-201ENSMUST00000033898 4932415D10RikA0A1W2P6U8 4986 aa3.87□□□□□ -1.79
Col4a1-201ENSMUST00000033898 Fat4Q2PZL6 4981 aa3.86□□□□□ -1.79
Col4a1-201ENSMUST00000033898 Gm11554B1AQB2 190 aa3.85□□□□□ -1.79
Col4a1-201ENSMUST00000033898 Muc5bE9Q5I3 4800 aa3.79□□□□□ -1.8
Col4a1-201ENSMUST00000033898 Ush2AQ2QI47 5193 aa3.73□□□□□ -1.81
Col4a1-201ENSMUST00000033898 Krtap6-3A0A087WQL6 57 aa3.65□□□□□ -1.82
Col4a1-201ENSMUST00000033898 Krtap31-2Q8CAY5 177 aa3.63□□□□□ -1.83
Col4a1-201ENSMUST00000033898 Rnf213E9Q555 5152 aaKnown RBP3.57□□□□□ -1.84
Col4a1-201ENSMUST00000033898 Krtap20-2E9Q0A8 60 aa3.54□□□□□ -1.84
Col4a1-201ENSMUST00000033898 Mt1P02802 61 aaKnown RBP3.53□□□□□ -1.84
Col4a1-201ENSMUST00000033898 SspoQ8CG65 4998 aa3.39□□□□□ -1.87
Col4a1-201ENSMUST00000033898 Muc16A0A140LJ72 8478 aa3.18□□□□□ -1.9
Col4a1-201ENSMUST00000033898 Gm11555B1AQ89 175 aa3.13□□□□□ -1.91
Col4a1-201ENSMUST00000033898 ObscnA2AAJ9 8891 aaKnown RBP3.08□□□□□ -1.92
Col4a1-201ENSMUST00000033898 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Col4a1-201ENSMUST00000033898 DstQ91ZU6 7393 aaKnown RBP2.98□□□□□ -1.93
Col4a1-201ENSMUST00000033898 1110025L11RikO09048 78 aa2.93□□□□□ -1.94
Col4a1-201ENSMUST00000033898 Krtap6-5Q925H3 78 aa2.93□□□□□ -1.94
Col4a1-201ENSMUST00000033898 Macf1Q9QXZ0 7354 aaKnown RBP2.93□□□□□ -1.94
Col4a1-201ENSMUST00000033898 Eppk1Q8R0W0 6548 aa2.86□□□□□ -1.95
Col4a1-201ENSMUST00000033898 Gm10229O08631 77 aa2.85□□□□□ -1.95
Col4a1-201ENSMUST00000033898 Kmt2dQ6PDK2 5588 aa2.83□□□□□ -1.96
Col4a1-201ENSMUST00000033898 Phgr1Q8K0G7 91 aa2.8□□□□□ -1.96
Col4a1-201ENSMUST00000033898 Gm11568A2A4M2 211 aa2.78□□□□□ -1.96
Col4a1-201ENSMUST00000033898 Krtap9-1Q64526 186 aa2.78□□□□□ -1.96
Col4a1-201ENSMUST00000033898 Gm11559Q9D3H7 191 aa2.77□□□□□ -1.97
Col4a1-201ENSMUST00000033898 Muc19Q6PZE0 7524 aa2.75□□□□□ -1.97
Col4a1-201ENSMUST00000033898 A0A1Y7VLE6 161 aa2.54□□□□□ -2
Col4a1-201ENSMUST00000033898 A030003K21RikA0A1Y7VIM3 128 aa2.4□□□□□ -2.03
Col4a1-201ENSMUST00000033898 Gm6217A0A1Y7VJK9 128 aa2.25□□□□□ -2.05
Col4a1-201ENSMUST00000033898 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Col4a1-201ENSMUST00000033898 Krtap5-2Q9D5Z7 189 aa2.24□□□□□ -2.05
Col4a1-201ENSMUST00000033898 Gm11639A0A1D5RLM8 5808 aa2.2□□□□□ -2.06
Col4a1-201ENSMUST00000033898 Gm11567Q9D141 195 aa2.2□□□□□ -2.06
Col4a1-201ENSMUST00000033898 A0A1Y7VJ07 166 aa2.18□□□□□ -2.06
Col4a1-201ENSMUST00000033898 Gm2431E9Q8S1 172 aa2.13□□□□□ -2.07
Col4a1-201ENSMUST00000033898 Gm4553A0A1B0GSA9 284 aa2.08□□□□□ -2.08
Col4a1-201ENSMUST00000033898 Gpr98Q8VHN7 6298 aaKnown RBP2.08□□□□□ -2.08
Col4a1-201ENSMUST00000033898 Krtap28-10A0A1Y7VP58 119 aa2.04□□□□□ -2.08
Col4a1-201ENSMUST00000033898 Krtap21-1Q925H4 128 aa1.99□□□□□ -2.09
Col4a1-201ENSMUST00000033898 Hmcn1D3YXG0 5634 aa1.98□□□□□ -2.09
Col4a1-201ENSMUST00000033898 A030005K14RikA0A1Y7VNY1 122 aa1.98□□□□□ -2.09
Col4a1-201ENSMUST00000033898 Gm7544A0A1Y7VJ58 118 aa1.96□□□□□ -2.1
Col4a1-201ENSMUST00000033898 A030014E15RikA0A1Y7VJV2 120 aa1.93□□□□□ -2.1
Col4a1-201ENSMUST00000033898 Gm10153A0A1B0GRL1 320 aa1.91□□□□□ -2.1
Col4a1-201ENSMUST00000033898 A030005L19RikA0A1Y7VIU2 113 aa1.87□□□□□ -2.11
Col4a1-201ENSMUST00000033898 Krtap28-13A0A087WQP5 138 aa1.86□□□□□ -2.11
Col4a1-201ENSMUST00000033898 A0A1Y7VJH8 109 aa1.83□□□□□ -2.12
Col4a1-201ENSMUST00000033898 Gm45337A0A1B0GS71 263 aa1.75□□□□□ -2.13
Col4a1-201ENSMUST00000033898 AhnakE9Q616 5656 aaKnown RBP1.74□□□□□ -2.13
Col4a1-201ENSMUST00000033898 Gm40460A0A1B0GR10 244 aa1.65□□□□□ -2.15
Col4a1-201ENSMUST00000033898 Gm7579A0A1B0GRJ4 243 aa1.65□□□□□ -2.15
Col4a1-201ENSMUST00000033898 Krtap5-5Q2TA51 241 aa1.65□□□□□ -2.15
Col4a1-201ENSMUST00000033898 Krtap5-4Q62220 223 aa1.65□□□□□ -2.15
Col4a1-201ENSMUST00000033898 Gm39115A0A1B0GSH7 232 aa1.61□□□□□ -2.15
Col4a1-201ENSMUST00000033898 A0A286YCP9 139 aa1.56□□□□□ -2.16
Col4a1-201ENSMUST00000033898 Gm45618A0A1B0GSA0 219 aa1.43□□□□□ -2.18
Col4a1-201ENSMUST00000033898 Krtap5-1Q64507 230 aa1.32□□□□□ -2.2
Col4a1-201ENSMUST00000033898 Gm29735A0A1B0GT06 219 aa1.24□□□□□ -2.21
Col4a1-201ENSMUST00000033898 Gm4559A4IF42 199 aa0.71□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 170 ms