RNA–Protein interactions for RNA: ENSMUST00000029444.12

Trim33-201, Transcript of E3 ubiquitin-protein ligase TRIM33, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim33, Length 8,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33-201ENSMUST00000029444 Krtap4-16Q91W93 202 aa5.35□□□□□ -1.55
Trim33-201ENSMUST00000029444 ZanO88799 5376 aa5.34□□□□□ -1.55
Trim33-201ENSMUST00000029444 Krtap4-1Q3UUY3 169 aa5.29□□□□□ -1.56
Trim33-201ENSMUST00000029444 Gm11596B1AQB0 205 aa5.27□□□□□ -1.57
Trim33-201ENSMUST00000029444 Syne1Q6ZWR6 8799 aa5.25□□□□□ -1.57
Trim33-201ENSMUST00000029444 Gm11564A2A4L9 201 aa5.24□□□□□ -1.57
Trim33-201ENSMUST00000029444 Gm11563B1AQ90 168 aa5.24□□□□□ -1.57
Trim33-201ENSMUST00000029444 Gm11595B1AQA7 289 aa5.24□□□□□ -1.57
Trim33-201ENSMUST00000029444 Krtap4-8B1AQA8 209 aa5.24□□□□□ -1.57
Trim33-201ENSMUST00000029444 Krtap4-9B1AQA9 244 aa5.2□□□□□ -1.58
Trim33-201ENSMUST00000029444 Krtap4-13Q9D7P3 165 aa5.05□□□□□ -1.6
Trim33-201ENSMUST00000029444 Birc6O88738 4882 aa5□□□□□ -1.61
Trim33-201ENSMUST00000029444 Krtap6-3A0A087WQL6 57 aa4.97□□□□□ -1.61
Trim33-201ENSMUST00000029444 Herc1E9PZP8 4859 aa4.93□□□□□ -1.62
Trim33-201ENSMUST00000029444 Muc5bE9Q5I3 4800 aa4.91□□□□□ -1.62
Trim33-201ENSMUST00000029444 Syne2Q6ZWQ0 6874 aaKnown RBP4.85□□□□□ -1.63
Trim33-201ENSMUST00000029444 ObscnA2AAJ9 8891 aaKnown RBP4.83□□□□□ -1.64
Trim33-201ENSMUST00000029444 Hmcn2A2AJ76 5100 aa4.76□□□□□ -1.65
Trim33-201ENSMUST00000029444 Mdn1A2ANY6 5589 aaKnown RBP4.7□□□□□ -1.66
Trim33-201ENSMUST00000029444 Gm11554B1AQB2 190 aa4.6□□□□□ -1.67
Trim33-201ENSMUST00000029444 Ubr4A2AN08 5180 aa4.59□□□□□ -1.67
Trim33-201ENSMUST00000029444 Kiaa1109A2AAE1 5005 aa4.55□□□□□ -1.68
Trim33-201ENSMUST00000029444 4932415D10RikA0A1W2P6U8 4986 aa4.5□□□□□ -1.69
Trim33-201ENSMUST00000029444 Fsip2A2ARZ3 6995 aa4.5□□□□□ -1.69
Trim33-201ENSMUST00000029444 Krtap20-2E9Q0A8 60 aa4.41□□□□□ -1.7
Trim33-201ENSMUST00000029444 1110025L11RikO09048 78 aa4.4□□□□□ -1.71
Trim33-201ENSMUST00000029444 Krtap6-5Q925H3 78 aa4.4□□□□□ -1.71
Trim33-201ENSMUST00000029444 SspoQ8CG65 4998 aa4.29□□□□□ -1.72
Trim33-201ENSMUST00000029444 Krtap17-1A2A5X6 109 aa4.27□□□□□ -1.73
Trim33-201ENSMUST00000029444 A0A1Y7VLE6 161 aa4.25□□□□□ -1.73
Trim33-201ENSMUST00000029444 Gm10229O08631 77 aa4.24□□□□□ -1.73
Trim33-201ENSMUST00000029444 HydinQ80W93 5154 aa4.19□□□□□ -1.74
Trim33-201ENSMUST00000029444 Abca13Q5SSE9 5034 aa4.07□□□□□ -1.76
Trim33-201ENSMUST00000029444 Fat4Q2PZL6 4981 aa4.05□□□□□ -1.76
Trim33-201ENSMUST00000029444 Eppk1Q8R0W0 6548 aa4.02□□□□□ -1.77
Trim33-201ENSMUST00000029444 Phgr1Q8K0G7 91 aa3.98□□□□□ -1.77
Trim33-201ENSMUST00000029444 Rnf213E9Q555 5152 aaKnown RBP3.97□□□□□ -1.77
Trim33-201ENSMUST00000029444 A030003K21RikA0A1Y7VIM3 128 aa3.93□□□□□ -1.78
Trim33-201ENSMUST00000029444 Ush2AQ2QI47 5193 aa3.77□□□□□ -1.81
Trim33-201ENSMUST00000029444 Kmt2dQ6PDK2 5588 aa3.76□□□□□ -1.81
Trim33-201ENSMUST00000029444 Muc16A0A140LJ72 8478 aa3.71□□□□□ -1.81
Trim33-201ENSMUST00000029444 Gm6217A0A1Y7VJK9 128 aa3.67□□□□□ -1.82
Trim33-201ENSMUST00000029444 Gm11555B1AQ89 175 aa3.65□□□□□ -1.83
Trim33-201ENSMUST00000029444 Gm11559Q9D3H7 191 aa3.56□□□□□ -1.84
Trim33-201ENSMUST00000029444 DstQ91ZU6 7393 aaKnown RBP3.54□□□□□ -1.84
Trim33-201ENSMUST00000029444 Macf1Q9QXZ0 7354 aaKnown RBP3.45□□□□□ -1.86
Trim33-201ENSMUST00000029444 A030005K14RikA0A1Y7VNY1 122 aa3.4□□□□□ -1.87
Trim33-201ENSMUST00000029444 Krtap28-10A0A1Y7VP58 119 aa3.4□□□□□ -1.87
Trim33-201ENSMUST00000029444 Gm11568A2A4M2 211 aa3.37□□□□□ -1.87
Trim33-201ENSMUST00000029444 Krtap9-1Q64526 186 aa3.37□□□□□ -1.87
Trim33-201ENSMUST00000029444 NebE9Q1W3 7152 aa3.34□□□□□ -1.87
Trim33-201ENSMUST00000029444 Gm11567Q9D141 195 aa3.34□□□□□ -1.87
Trim33-201ENSMUST00000029444 A0A1Y7VJH8 109 aa3.34□□□□□ -1.87
Trim33-201ENSMUST00000029444 Krtap6-2O08884 159 aa3.31□□□□□ -1.88
Trim33-201ENSMUST00000029444 Gm7544A0A1Y7VJ58 118 aa3.24□□□□□ -1.89
Trim33-201ENSMUST00000029444 Muc19Q6PZE0 7524 aa3.16□□□□□ -1.9
Trim33-201ENSMUST00000029444 Krtap5-2Q9D5Z7 189 aa3.13□□□□□ -1.91
Trim33-201ENSMUST00000029444 A0A1Y7VJ07 166 aa3.12□□□□□ -1.91
Trim33-201ENSMUST00000029444 Krtap28-13A0A087WQP5 138 aa3.12□□□□□ -1.91
Trim33-201ENSMUST00000029444 A030005L19RikA0A1Y7VIU2 113 aa3.11□□□□□ -1.91
Trim33-201ENSMUST00000029444 Hmcn1D3YXG0 5634 aa3.02□□□□□ -1.93
Trim33-201ENSMUST00000029444 Krtap21-1Q925H4 128 aa2.99□□□□□ -1.93
Trim33-201ENSMUST00000029444 Gm11639A0A1D5RLM8 5808 aa2.98□□□□□ -1.93
Trim33-201ENSMUST00000029444 Gpr98Q8VHN7 6298 aaKnown RBP2.93□□□□□ -1.94
Trim33-201ENSMUST00000029444 Gm4553A0A1B0GSA9 284 aa2.91□□□□□ -1.94
Trim33-201ENSMUST00000029444 A030014E15RikA0A1Y7VJV2 120 aa2.64□□□□□ -1.99
Trim33-201ENSMUST00000029444 Gm10153A0A1B0GRL1 320 aa2.55□□□□□ -2
Trim33-201ENSMUST00000029444 Gm2431E9Q8S1 172 aa2.48□□□□□ -2.01
Trim33-201ENSMUST00000029444 Gm45337A0A1B0GS71 263 aa2.43□□□□□ -2.02
Trim33-201ENSMUST00000029444 Gm40460A0A1B0GR10 244 aa2.39□□□□□ -2.03
Trim33-201ENSMUST00000029444 Gm7579A0A1B0GRJ4 243 aa2.39□□□□□ -2.03
Trim33-201ENSMUST00000029444 Krtap5-5Q2TA51 241 aa2.39□□□□□ -2.03
Trim33-201ENSMUST00000029444 Krtap5-4Q62220 223 aa2.39□□□□□ -2.03
Trim33-201ENSMUST00000029444 Gm39115A0A1B0GSH7 232 aa2.36□□□□□ -2.03
Trim33-201ENSMUST00000029444 AhnakE9Q616 5656 aaKnown RBP2.26□□□□□ -2.05
Trim33-201ENSMUST00000029444 A0A286YCP9 139 aa2.24□□□□□ -2.05
Trim33-201ENSMUST00000029444 Gm29735A0A1B0GT06 219 aa1.92□□□□□ -2.1
Trim33-201ENSMUST00000029444 Gm45618A0A1B0GSA0 219 aa1.87□□□□□ -2.11
Trim33-201ENSMUST00000029444 Krtap5-1Q64507 230 aa1.46□□□□□ -2.18
Trim33-201ENSMUST00000029444 Gm4559A4IF42 199 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 79.5 ms