RNA–Protein interactions for RNA: ENSMUST00000028377.13

Scn2a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn2a, Length 8,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2a-201ENSMUST00000028377 Ryr3A2AGL3 4863 aa1.78□□□□□ -2.12
Scn2a-201ENSMUST00000028377 Birc6O88738 4882 aa1.78□□□□□ -2.12
Scn2a-201ENSMUST00000028377 Kmt2cQ8BRH4 4903 aa1.78□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Lce1eQ9D139 143 aa1.76□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Lce1bQ9D149 137 aa1.76□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Lrp2A2ARV4 4660 aa1.76□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Herc2Q4U2R1 4836 aa1.75□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Herc1E9PZP8 4859 aa1.74□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Abca13Q5SSE9 5034 aa1.73□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Kiaa1109A2AAE1 5005 aa1.72□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Gm10061D3Z714 54 aa1.72□□□□□ -2.13
Scn2a-201ENSMUST00000028377 Krtap17-1A2A5X6 109 aa1.71□□□□□ -2.14
Scn2a-201ENSMUST00000028377 Mt4P47945 62 aa1.7□□□□□ -2.14
Scn2a-201ENSMUST00000028377 Mdn1A2ANY6 5589 aaKnown RBP1.69□□□□□ -2.14
Scn2a-201ENSMUST00000028377 Ubr4A2AN08 5180 aa1.69□□□□□ -2.14
Scn2a-201ENSMUST00000028377 Gm11569B1AQB1 180 aa1.67□□□□□ -2.14
Scn2a-201ENSMUST00000028377 Lce1a2Q9D1K4 149 aa1.65□□□□□ -2.15
Scn2a-201ENSMUST00000028377 Hmcn2A2AJ76 5100 aa1.64□□□□□ -2.15
Scn2a-201ENSMUST00000028377 Mt1P02802 61 aaKnown RBP1.63□□□□□ -2.15
Scn2a-201ENSMUST00000028377 Krtap4-6Q3V4B7 195 aa1.63□□□□□ -2.15
Scn2a-201ENSMUST00000028377 Rnf213E9Q555 5152 aaKnown RBP1.63□□□□□ -2.15
Scn2a-201ENSMUST00000028377 Krtap4-16Q91W93 202 aa1.62□□□□□ -2.15
Scn2a-201ENSMUST00000028377 Sprr2bO70554 98 aa1.62□□□□□ -2.15
Scn2a-201ENSMUST00000028377 4932415D10RikA0A1W2P6U8 4986 aa1.61□□□□□ -2.15
Scn2a-201ENSMUST00000028377 Ush2AQ2QI47 5193 aa1.59□□□□□ -2.16
Scn2a-201ENSMUST00000028377 Muc5bE9Q5I3 4800 aa1.58□□□□□ -2.16
Scn2a-201ENSMUST00000028377 Fat4Q2PZL6 4981 aa1.57□□□□□ -2.16
Scn2a-201ENSMUST00000028377 Gm11555B1AQ89 175 aa1.56□□□□□ -2.16
Scn2a-201ENSMUST00000028377 2300003K06RikA2A4M0 262 aa1.55□□□□□ -2.16
Scn2a-201ENSMUST00000028377 Syne1Q6ZWR6 8799 aa1.54□□□□□ -2.16
Scn2a-201ENSMUST00000028377 Lce1kJ3QP15 125 aa1.52□□□□□ -2.17
Scn2a-201ENSMUST00000028377 Gm11564A2A4L9 201 aa1.5□□□□□ -2.17
Scn2a-201ENSMUST00000028377 Gm11595B1AQA7 289 aa1.5□□□□□ -2.17
Scn2a-201ENSMUST00000028377 Krtap4-8B1AQA8 209 aa1.5□□□□□ -2.17
Scn2a-201ENSMUST00000028377 Krtap4-9B1AQA9 244 aa1.49□□□□□ -2.17
Scn2a-201ENSMUST00000028377 Krtap4-13Q9D7P3 165 aa1.49□□□□□ -2.17
Scn2a-201ENSMUST00000028377 Gm11596B1AQB0 205 aa1.48□□□□□ -2.17
Scn2a-201ENSMUST00000028377 Lce1a1Q9CQH5 143 aa1.45□□□□□ -2.18
Scn2a-201ENSMUST00000028377 SspoQ8CG65 4998 aa1.43□□□□□ -2.18
Scn2a-201ENSMUST00000028377 ObscnA2AAJ9 8891 aaKnown RBP1.41□□□□□ -2.18
Scn2a-201ENSMUST00000028377 Syne2Q6ZWQ0 6874 aaKnown RBP1.38□□□□□ -2.19
Scn2a-201ENSMUST00000028377 Gm11554B1AQB2 190 aa1.38□□□□□ -2.19
Scn2a-201ENSMUST00000028377 Kmt2dQ6PDK2 5588 aa1.36□□□□□ -2.19
Scn2a-201ENSMUST00000028377 Krtap6-3A0A087WQL6 57 aa1.34□□□□□ -2.2
Scn2a-201ENSMUST00000028377 Gm11559Q9D3H7 191 aa1.33□□□□□ -2.2
Scn2a-201ENSMUST00000028377 Fsip2A2ARZ3 6995 aa1.32□□□□□ -2.2
Scn2a-201ENSMUST00000028377 Eppk1Q8R0W0 6548 aa1.28□□□□□ -2.21
Scn2a-201ENSMUST00000028377 Gm45618A0A1B0GSA0 219 aa1.27□□□□□ -2.21
Scn2a-201ENSMUST00000028377 Muc16A0A140LJ72 8478 aa1.26□□□□□ -2.21
Scn2a-201ENSMUST00000028377 Krtap20-2E9Q0A8 60 aa1.26□□□□□ -2.21
Scn2a-201ENSMUST00000028377 1110025L11RikO09048 78 aa1.25□□□□□ -2.21
Scn2a-201ENSMUST00000028377 Krtap6-5Q925H3 78 aa1.25□□□□□ -2.21
Scn2a-201ENSMUST00000028377 Gpr98Q8VHN7 6298 aaKnown RBP1.24□□□□□ -2.21
Scn2a-201ENSMUST00000028377 Gm39115A0A1B0GSH7 232 aa1.22□□□□□ -2.21
Scn2a-201ENSMUST00000028377 Gm11639A0A1D5RLM8 5808 aa1.19□□□□□ -2.22
Scn2a-201ENSMUST00000028377 Krtap9-1Q64526 186 aa1.18□□□□□ -2.22
Scn2a-201ENSMUST00000028377 Hmcn1D3YXG0 5634 aa1.18□□□□□ -2.22
Scn2a-201ENSMUST00000028377 Gm11567Q9D141 195 aa1.17□□□□□ -2.22
Scn2a-201ENSMUST00000028377 Gm11568A2A4M2 211 aa1.17□□□□□ -2.22
Scn2a-201ENSMUST00000028377 Gm10229O08631 77 aa1.16□□□□□ -2.22
Scn2a-201ENSMUST00000028377 DstQ91ZU6 7393 aaKnown RBP1.12□□□□□ -2.23
Scn2a-201ENSMUST00000028377 Macf1Q9QXZ0 7354 aaKnown RBP1.12□□□□□ -2.23
Scn2a-201ENSMUST00000028377 Krtap5-2Q9D5Z7 189 aa1.11□□□□□ -2.23
Scn2a-201ENSMUST00000028377 NebE9Q1W3 7152 aa1.05□□□□□ -2.24
Scn2a-201ENSMUST00000028377 Phgr1Q8K0G7 91 aa1.05□□□□□ -2.24
Scn2a-201ENSMUST00000028377 Gm4553A0A1B0GSA9 284 aa1.02□□□□□ -2.25
Scn2a-201ENSMUST00000028377 Gm10153A0A1B0GRL1 320 aa0.98□□□□□ -2.25
Scn2a-201ENSMUST00000028377 AhnakE9Q616 5656 aaKnown RBP0.97□□□□□ -2.25
Scn2a-201ENSMUST00000028377 Muc19Q6PZE0 7524 aa0.96□□□□□ -2.25
Scn2a-201ENSMUST00000028377 Gm45337A0A1B0GS71 263 aa0.96□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Gm40460A0A1B0GR10 244 aa0.95□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Gm7579A0A1B0GRJ4 243 aa0.95□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Krtap5-5Q2TA51 241 aa0.95□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Krtap5-4Q62220 223 aa0.95□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Krtap6-2O08884 159 aa0.93□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Gm2431E9Q8S1 172 aa0.93□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Krtap21-1Q925H4 128 aa0.9□□□□□ -2.26
Scn2a-201ENSMUST00000028377 Gm29735A0A1B0GT06 219 aa0.86□□□□□ -2.27
Scn2a-201ENSMUST00000028377 Krtap5-1Q64507 230 aa0.83□□□□□ -2.28
Scn2a-201ENSMUST00000028377 Gm4559A4IF42 199 aa0.7□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 70.1 ms