RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Gm11596B1AQB0 205 aa3.73□□□□□ -1.81
Col7a1-201ENSMUST00000026740 Krtap4-1Q3UUY3 169 aa3.72□□□□□ -1.81
Col7a1-201ENSMUST00000026740 Ryr3A2AGL3 4863 aa3.71□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-16Q91W93 202 aa3.7□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Gm11564A2A4L9 201 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Gm11563B1AQ90 168 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Gm11595B1AQA7 289 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-8B1AQA8 209 aa3.69□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-9B1AQA9 244 aa3.66□□□□□ -1.82
Col7a1-201ENSMUST00000026740 Krtap4-13Q9D7P3 165 aa3.58□□□□□ -1.84
Col7a1-201ENSMUST00000026740 Syne2Q6ZWQ0 6874 aaKnown RBP3.57□□□□□ -1.84
Col7a1-201ENSMUST00000026740 Syne1Q6ZWR6 8799 aa3.54□□□□□ -1.84
Col7a1-201ENSMUST00000026740 Herc1E9PZP8 4859 aa3.51□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Krtap6-3A0A087WQL6 57 aa3.5□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Birc6O88738 4882 aa3.49□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Muc5bE9Q5I3 4800 aa3.47□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Kiaa1109A2AAE1 5005 aa3.47□□□□□ -1.85
Col7a1-201ENSMUST00000026740 Mdn1A2ANY6 5589 aaKnown RBP3.35□□□□□ -1.87
Col7a1-201ENSMUST00000026740 ObscnA2AAJ9 8891 aaKnown RBP3.33□□□□□ -1.88
Col7a1-201ENSMUST00000026740 Ubr4A2AN08 5180 aa3.29□□□□□ -1.88
Col7a1-201ENSMUST00000026740 Gm11554B1AQB2 190 aa3.27□□□□□ -1.89
Col7a1-201ENSMUST00000026740 Hmcn2A2AJ76 5100 aa3.26□□□□□ -1.89
Col7a1-201ENSMUST00000026740 Abca13Q5SSE9 5034 aa3.22□□□□□ -1.89
Col7a1-201ENSMUST00000026740 Fsip2A2ARZ3 6995 aa3.2□□□□□ -1.9
Col7a1-201ENSMUST00000026740 4932415D10RikA0A1W2P6U8 4986 aa3.17□□□□□ -1.9
Col7a1-201ENSMUST00000026740 Krtap20-2E9Q0A8 60 aa3.11□□□□□ -1.91
Col7a1-201ENSMUST00000026740 HydinQ80W93 5154 aa3.1□□□□□ -1.91
Col7a1-201ENSMUST00000026740 Krtap17-1A2A5X6 109 aa3.08□□□□□ -1.92
Col7a1-201ENSMUST00000026740 1110025L11RikO09048 78 aa3.04□□□□□ -1.92
Col7a1-201ENSMUST00000026740 Krtap6-5Q925H3 78 aa3.04□□□□□ -1.92
Col7a1-201ENSMUST00000026740 Fat4Q2PZL6 4981 aa3.03□□□□□ -1.92
Col7a1-201ENSMUST00000026740 SspoQ8CG65 4998 aa3.02□□□□□ -1.93
Col7a1-201ENSMUST00000026740 Gm10229O08631 77 aa2.95□□□□□ -1.94
Col7a1-201ENSMUST00000026740 Rnf213E9Q555 5152 aaKnown RBP2.91□□□□□ -1.94
Col7a1-201ENSMUST00000026740 Ush2AQ2QI47 5193 aa2.83□□□□□ -1.96
Col7a1-201ENSMUST00000026740 Eppk1Q8R0W0 6548 aa2.82□□□□□ -1.96
Col7a1-201ENSMUST00000026740 Phgr1Q8K0G7 91 aa2.75□□□□□ -1.97
Col7a1-201ENSMUST00000026740 Kmt2dQ6PDK2 5588 aa2.74□□□□□ -1.97
Col7a1-201ENSMUST00000026740 Muc16A0A140LJ72 8478 aa2.64□□□□□ -1.99
Col7a1-201ENSMUST00000026740 Gm11555B1AQ89 175 aa2.59□□□□□ -1.99
Col7a1-201ENSMUST00000026740 Macf1Q9QXZ0 7354 aaKnown RBP2.52□□□□□ -2.01
Col7a1-201ENSMUST00000026740 DstQ91ZU6 7393 aaKnown RBP2.52□□□□□ -2.01
Col7a1-201ENSMUST00000026740 Gm11559Q9D3H7 191 aa2.47□□□□□ -2.01
Col7a1-201ENSMUST00000026740 Gm11567Q9D141 195 aa2.41□□□□□ -2.02
Col7a1-201ENSMUST00000026740 NebE9Q1W3 7152 aa2.39□□□□□ -2.03
Col7a1-201ENSMUST00000026740 Gm11568A2A4M2 211 aa2.35□□□□□ -2.03
Col7a1-201ENSMUST00000026740 Krtap9-1Q64526 186 aa2.35□□□□□ -2.03
Col7a1-201ENSMUST00000026740 Krtap6-2O08884 159 aa2.3□□□□□ -2.04
Col7a1-201ENSMUST00000026740 Gm11639A0A1D5RLM8 5808 aa2.26□□□□□ -2.05
Col7a1-201ENSMUST00000026740 Gpr98Q8VHN7 6298 aaKnown RBP2.25□□□□□ -2.05
Col7a1-201ENSMUST00000026740 Muc19Q6PZE0 7524 aa2.24□□□□□ -2.05
Col7a1-201ENSMUST00000026740 Krtap5-2Q9D5Z7 189 aa2.19□□□□□ -2.06
Col7a1-201ENSMUST00000026740 Hmcn1D3YXG0 5634 aa2.17□□□□□ -2.06
Col7a1-201ENSMUST00000026740 Krtap21-1Q925H4 128 aa2.04□□□□□ -2.08
Col7a1-201ENSMUST00000026740 Gm4553A0A1B0GSA9 284 aa1.99□□□□□ -2.09
Col7a1-201ENSMUST00000026740 Gm10153A0A1B0GRL1 320 aa1.89□□□□□ -2.11
Col7a1-201ENSMUST00000026740 A030005L19RikA0A1Y7VIU2 113 aa1.84□□□□□ -2.12
Col7a1-201ENSMUST00000026740 Gm2431E9Q8S1 172 aa1.77□□□□□ -2.13
Col7a1-201ENSMUST00000026740 Gm45337A0A1B0GS71 263 aa1.75□□□□□ -2.13
Col7a1-201ENSMUST00000026740 Gm40460A0A1B0GR10 244 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Gm7579A0A1B0GRJ4 243 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Krtap5-5Q2TA51 241 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Krtap5-4Q62220 223 aa1.69□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Gm39115A0A1B0GSH7 232 aa1.68□□□□□ -2.14
Col7a1-201ENSMUST00000026740 AhnakE9Q616 5656 aaKnown RBP1.66□□□□□ -2.14
Col7a1-201ENSMUST00000026740 Gm29735A0A1B0GT06 219 aa1.36□□□□□ -2.19
Col7a1-201ENSMUST00000026740 A0A1Y7VJH8 109 aa1.35□□□□□ -2.19
Col7a1-201ENSMUST00000026740 Gm45618A0A1B0GSA0 219 aa1.33□□□□□ -2.2
Col7a1-201ENSMUST00000026740 A0A1Y7VLE6 161 aa1.12□□□□□ -2.23
Col7a1-201ENSMUST00000026740 Krtap5-1Q64507 230 aa1.04□□□□□ -2.24
Col7a1-201ENSMUST00000026740 Gm4559A4IF42 199 aa0.6□□□□□ -2.31
Col7a1-201ENSMUST00000026740 A030014E15RikA0A1Y7VJV2 120 aa0.42□□□□□ -2.34
Col7a1-201ENSMUST00000026740 A0A1Y7VJ07 166 aa0.39□□□□□ -2.35
Col7a1-201ENSMUST00000026740 A0A286YCP9 139 aa0.32□□□□□ -2.36
Col7a1-201ENSMUST00000026740 Krtap28-13A0A087WQP5 138 aa0.1□□□□□ -2.39
Col7a1-201ENSMUST00000026740 A030003K21RikA0A1Y7VIM3 128 aa0.1□□□□□ -2.39
Col7a1-201ENSMUST00000026740 Gm6217A0A1Y7VJK9 128 aa0.1□□□□□ -2.39
Col7a1-201ENSMUST00000026740 Krtap28-10A0A1Y7VP58 119 aa-0.02□□□□□ -2.41
Col7a1-201ENSMUST00000026740 A030005K14RikA0A1Y7VNY1 122 aa-0.03□□□□□ -2.41
Col7a1-201ENSMUST00000026740 Gm7544A0A1Y7VJ58 118 aa-0.18□□□□□ -2.44
Retrieved 80 of 22,080 RNA–protein pairs in 11.9 ms