RNA–Protein interactions for RNA: ENSMUST00000025204.5

Pfdn1-201, Transcript of Prefoldin subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pfdn1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1-201ENSMUST00000025204 Lce1fB9EJP6 147 aa5.04□□□□□ -1.6
Pfdn1-201ENSMUST00000025204 Camk2n1Q6QWF9 78 aa5.02□□□□□ -1.61
Pfdn1-201ENSMUST00000025204 H2al1kJ3QP08 105 aa4.91□□□□□ -1.62
Pfdn1-201ENSMUST00000025204 Gm2431E9Q8S1 172 aa4.88□□□□□ -1.63
Pfdn1-201ENSMUST00000025204 Gm3880A0A1B0GSB3 72 aa4.86□□□□□ -1.63
Pfdn1-201ENSMUST00000025204 H2al1mQ9DAD9 105 aa4.86□□□□□ -1.63
Pfdn1-201ENSMUST00000025204 Gm11567Q9D141 195 aa4.85□□□□□ -1.63
Pfdn1-201ENSMUST00000025204 Sprr2gO70558 76 aa4.84□□□□□ -1.63
Pfdn1-201ENSMUST00000025204 Krtap20-2E9Q0A8 60 aa4.82□□□□□ -1.64
Pfdn1-201ENSMUST00000025204 Gm11554B1AQB2 190 aa4.81□□□□□ -1.64
Pfdn1-201ENSMUST00000025204 Sox16Q62247 57 aa4.76□□□□□ -1.65
Pfdn1-201ENSMUST00000025204 Gm45618A0A1B0GSA0 219 aa4.74□□□□□ -1.65
Pfdn1-201ENSMUST00000025204 Gm39115A0A1B0GSH7 232 aa4.74□□□□□ -1.65
Pfdn1-201ENSMUST00000025204 Gm10337F7DEP7 55 aa4.72□□□□□ -1.65
Pfdn1-201ENSMUST00000025204 4933415A04RikQ9D443 101 aa4.71□□□□□ -1.66
Pfdn1-201ENSMUST00000025204 Gm12216A0A1W2P827 62 aa4.69□□□□□ -1.66
Pfdn1-201ENSMUST00000025204 Ndufs5Q99LY9 106 aa4.69□□□□□ -1.66
Pfdn1-201ENSMUST00000025204 Krtap5-2Q9D5Z7 189 aa4.63□□□□□ -1.67
Pfdn1-201ENSMUST00000025204 2310046K23RikA0A0A6YVW6 87 aa4.62□□□□□ -1.67
Pfdn1-201ENSMUST00000025204 Gm29735A0A1B0GT06 219 aa4.61□□□□□ -1.67
Pfdn1-201ENSMUST00000025204 Romo1P60603 79 aa4.61□□□□□ -1.67
Pfdn1-201ENSMUST00000025204 Krtap7-1Q9D3I6 87 aa4.59□□□□□ -1.67
Pfdn1-201ENSMUST00000025204 Sprr2iO70560 76 aa4.54□□□□□ -1.68
Pfdn1-201ENSMUST00000025204 Gm3646F6S692 53 aa4.51□□□□□ -1.69
Pfdn1-201ENSMUST00000025204 Lce3bQ9CQM7 98 aa4.48□□□□□ -1.69
Pfdn1-201ENSMUST00000025204 Eppk1Q8R0W0 6548 aa4.48□□□□□ -1.69
Pfdn1-201ENSMUST00000025204 Gm10272F7CZ33 110 aa4.47□□□□□ -1.69
Pfdn1-201ENSMUST00000025204 Syne1Q6ZWR6 8799 aa4.4□□□□□ -1.7
Pfdn1-201ENSMUST00000025204 Gm4553A0A1B0GSA9 284 aa4.4□□□□□ -1.71
Pfdn1-201ENSMUST00000025204 Gm11568A2A4M2 211 aa4.4□□□□□ -1.71
Pfdn1-201ENSMUST00000025204 Krtap9-1Q64526 186 aa4.4□□□□□ -1.71
Pfdn1-201ENSMUST00000025204 Tnp1P10856 55 aa4.34□□□□□ -1.71
Pfdn1-201ENSMUST00000025204 Gm10142J3KMP7 120 aa4.31□□□□□ -1.72
Pfdn1-201ENSMUST00000025204 Kmt2dQ6PDK2 5588 aa4.31□□□□□ -1.72
Pfdn1-201ENSMUST00000025204 Gm11639A0A1D5RLM8 5808 aa4.3□□□□□ -1.72
Pfdn1-201ENSMUST00000025204 Macf1Q9QXZ0 7354 aaKnown RBP4.28□□□□□ -1.72
Pfdn1-201ENSMUST00000025204 Gm40193A0A1B0GT39 78 aa4.27□□□□□ -1.73
Pfdn1-201ENSMUST00000025204 Gm45337A0A1B0GS71 263 aa4.24□□□□□ -1.73
Pfdn1-201ENSMUST00000025204 Gpr98Q8VHN7 6298 aaKnown RBP4.23□□□□□ -1.73
Pfdn1-201ENSMUST00000025204 Gm11938Q9D3H4 131 aa4.21□□□□□ -1.74
Pfdn1-201ENSMUST00000025204 Gm10153A0A1B0GRL1 320 aa4.18□□□□□ -1.74
Pfdn1-201ENSMUST00000025204 Mt1P02802 61 aaKnown RBP4.15□□□□□ -1.75
Pfdn1-201ENSMUST00000025204 Gm40460A0A1B0GR10 244 aa4.1□□□□□ -1.75
Pfdn1-201ENSMUST00000025204 Gm7579A0A1B0GRJ4 243 aa4.1□□□□□ -1.75
Pfdn1-201ENSMUST00000025204 Krtap5-5Q2TA51 241 aa4.1□□□□□ -1.75
Pfdn1-201ENSMUST00000025204 Krtap5-4Q62220 223 aa4.1□□□□□ -1.75
Pfdn1-201ENSMUST00000025204 Krtap19-4Q925H7 84 aa4.08□□□□□ -1.76
Pfdn1-201ENSMUST00000025204 Hmcn1D3YXG0 5634 aa4.08□□□□□ -1.76
Pfdn1-201ENSMUST00000025204 Muc19Q6PZE0 7524 aa4.05□□□□□ -1.76
Pfdn1-201ENSMUST00000025204 Lce3cQ91V05 98 aa4.02□□□□□ -1.77
Pfdn1-201ENSMUST00000025204 Lce3dE9Q8V1 98 aa3.97□□□□□ -1.77
Pfdn1-201ENSMUST00000025204 Mt3P28184 68 aa3.86□□□□□ -1.79
Pfdn1-201ENSMUST00000025204 Lce3eF8VQJ0 98 aa3.85□□□□□ -1.79
Pfdn1-201ENSMUST00000025204 Lce3fQ6PAI4 98 aa3.85□□□□□ -1.79
Pfdn1-201ENSMUST00000025204 Sprr2dO70555 85 aa3.81□□□□□ -1.8
Pfdn1-201ENSMUST00000025204 DstQ91ZU6 7393 aaKnown RBP3.8□□□□□ -1.8
Pfdn1-201ENSMUST00000025204 NebE9Q1W3 7152 aa3.79□□□□□ -1.8
Pfdn1-201ENSMUST00000025204 ObscnA2AAJ9 8891 aaKnown RBP3.77□□□□□ -1.81
Pfdn1-201ENSMUST00000025204 Mp68P56379 58 aa3.73□□□□□ -1.81
Pfdn1-201ENSMUST00000025204 4933428G20RikQ9D3X4 101 aa3.73□□□□□ -1.81
Pfdn1-201ENSMUST00000025204 Lce3aQ497I5 98 aa3.69□□□□□ -1.82
Pfdn1-201ENSMUST00000025204 Krtap4-16Q91W93 202 aa3.69□□□□□ -1.82
Pfdn1-201ENSMUST00000025204 Sprr2fO70557 76 aa3.65□□□□□ -1.83
Pfdn1-201ENSMUST00000025204 AhnakE9Q616 5656 aaKnown RBP3.62□□□□□ -1.83
Pfdn1-201ENSMUST00000025204 Gm20538F6Z9R1 75 aa3.61□□□□□ -1.83
Pfdn1-201ENSMUST00000025204 Sprr2eO70556 76 aa3.34□□□□□ -1.87
Pfdn1-201ENSMUST00000025204 Gm10024A0A0A0MQA4 119 aa3.33□□□□□ -1.88
Pfdn1-201ENSMUST00000025204 Ndufaf8A2AMZ4 74 aa3.27□□□□□ -1.89
Pfdn1-201ENSMUST00000025204 Sprr2hO70559 108 aa3.26□□□□□ -1.89
Pfdn1-201ENSMUST00000025204 Krtap5-1Q64507 230 aa3.22□□□□□ -1.89
Pfdn1-201ENSMUST00000025204 Gm9112A2AI92 75 aa3.07□□□□□ -1.92
Pfdn1-201ENSMUST00000025204 Gm4559A4IF42 199 aa3.05□□□□□ -1.92
Pfdn1-201ENSMUST00000025204 1110025L11RikO09048 78 aa3.01□□□□□ -1.93
Pfdn1-201ENSMUST00000025204 Krtap6-5Q925H3 78 aa3.01□□□□□ -1.93
Pfdn1-201ENSMUST00000025204 Muc16A0A140LJ72 8478 aa2.91□□□□□ -1.94
Pfdn1-201ENSMUST00000025204 Gm10229O08631 77 aa2.69□□□□□ -1.98
Pfdn1-201ENSMUST00000025204 Krtap21-1Q925H4 128 aa2.43□□□□□ -2.02
Pfdn1-201ENSMUST00000025204 Krtap6-2O08884 159 aa2.4□□□□□ -2.03
Pfdn1-201ENSMUST00000025204 Sprr2bO70554 98 aa2.38□□□□□ -2.03
Pfdn1-201ENSMUST00000025204 Phgr1Q8K0G7 91 aa1.97□□□□□ -2.09
Retrieved 80 of 22,080 RNA–protein pairs in 188 ms