RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 Ryr3A2AGL3 4863 aa4□□□□□ -1.77
Chd1-202ENSMUST00000024627 Fsip2A2ARZ3 6995 aa3.96□□□□□ -1.77
Chd1-202ENSMUST00000024627 Krtap4-16Q91W93 202 aa3.93□□□□□ -1.78
Chd1-202ENSMUST00000024627 Gm11938Q9D3H4 131 aa3.89□□□□□ -1.79
Chd1-202ENSMUST00000024627 Mt3P28184 68 aa3.85□□□□□ -1.79
Chd1-202ENSMUST00000024627 Dnhd1D3Z2X2 4750 aa3.85□□□□□ -1.79
Chd1-202ENSMUST00000024627 Syne1Q6ZWR6 8799 aa3.83□□□□□ -1.8
Chd1-202ENSMUST00000024627 Krtap17-1A2A5X6 109 aa3.83□□□□□ -1.8
Chd1-202ENSMUST00000024627 Gm11554B1AQB2 190 aa3.79□□□□□ -1.8
Chd1-202ENSMUST00000024627 PcloQ9QYX7 5068 aa3.79□□□□□ -1.8
Chd1-202ENSMUST00000024627 Herc1E9PZP8 4859 aa3.76□□□□□ -1.81
Chd1-202ENSMUST00000024627 Herc2Q4U2R1 4836 aa3.74□□□□□ -1.81
Chd1-202ENSMUST00000024627 Birc6O88738 4882 aa3.72□□□□□ -1.81
Chd1-202ENSMUST00000024627 Krtap31-2Q8CAY5 177 aa3.71□□□□□ -1.82
Chd1-202ENSMUST00000024627 ZanO88799 5376 aa3.64□□□□□ -1.83
Chd1-202ENSMUST00000024627 Mdn1A2ANY6 5589 aaKnown RBP3.59□□□□□ -1.84
Chd1-202ENSMUST00000024627 Hmcn2A2AJ76 5100 aa3.54□□□□□ -1.84
Chd1-202ENSMUST00000024627 HydinQ80W93 5154 aa3.52□□□□□ -1.85
Chd1-202ENSMUST00000024627 Krtap6-3A0A087WQL6 57 aa3.5□□□□□ -1.85
Chd1-202ENSMUST00000024627 Ryr2E9Q401 4966 aaKnown RBP3.48□□□□□ -1.85
Chd1-202ENSMUST00000024627 Krtap20-2E9Q0A8 60 aa3.41□□□□□ -1.86
Chd1-202ENSMUST00000024627 4932415D10RikA0A1W2P6U8 4986 aa3.35□□□□□ -1.87
Chd1-202ENSMUST00000024627 Mt1P02802 61 aaKnown RBP3.34□□□□□ -1.88
Chd1-202ENSMUST00000024627 Ubr4A2AN08 5180 aa3.31□□□□□ -1.88
Chd1-202ENSMUST00000024627 Kiaa1109A2AAE1 5005 aa3.31□□□□□ -1.88
Chd1-202ENSMUST00000024627 Abca13Q5SSE9 5034 aa3.3□□□□□ -1.88
Chd1-202ENSMUST00000024627 Muc16A0A140LJ72 8478 aa3.24□□□□□ -1.89
Chd1-202ENSMUST00000024627 Muc5bE9Q5I3 4800 aa3.23□□□□□ -1.89
Chd1-202ENSMUST00000024627 ObscnA2AAJ9 8891 aaKnown RBP3.2□□□□□ -1.9
Chd1-202ENSMUST00000024627 Macf1Q9QXZ0 7354 aaKnown RBP3.1□□□□□ -1.91
Chd1-202ENSMUST00000024627 Rnf213E9Q555 5152 aaKnown RBP3.08□□□□□ -1.92
Chd1-202ENSMUST00000024627 Fat4Q2PZL6 4981 aa2.99□□□□□ -1.93
Chd1-202ENSMUST00000024627 Gm11555B1AQ89 175 aa2.98□□□□□ -1.93
Chd1-202ENSMUST00000024627 Muc19Q6PZE0 7524 aa2.95□□□□□ -1.94
Chd1-202ENSMUST00000024627 DstQ91ZU6 7393 aaKnown RBP2.91□□□□□ -1.94
Chd1-202ENSMUST00000024627 SspoQ8CG65 4998 aa2.88□□□□□ -1.95
Chd1-202ENSMUST00000024627 NebE9Q1W3 7152 aa2.8□□□□□ -1.96
Chd1-202ENSMUST00000024627 Ush2AQ2QI47 5193 aa2.79□□□□□ -1.96
Chd1-202ENSMUST00000024627 1110025L11RikO09048 78 aa2.78□□□□□ -1.96
Chd1-202ENSMUST00000024627 Krtap6-5Q925H3 78 aa2.78□□□□□ -1.96
Chd1-202ENSMUST00000024627 Gm10229O08631 77 aa2.74□□□□□ -1.97
Chd1-202ENSMUST00000024627 Phgr1Q8K0G7 91 aa2.7□□□□□ -1.98
Chd1-202ENSMUST00000024627 A0A1Y7VLE6 161 aa2.67□□□□□ -1.98
Chd1-202ENSMUST00000024627 Gm11559Q9D3H7 191 aa2.53□□□□□ -2
Chd1-202ENSMUST00000024627 Kmt2dQ6PDK2 5588 aa2.49□□□□□ -2.01
Chd1-202ENSMUST00000024627 A030003K21RikA0A1Y7VIM3 128 aa2.46□□□□□ -2.02
Chd1-202ENSMUST00000024627 Gm11568A2A4M2 211 aa2.46□□□□□ -2.02
Chd1-202ENSMUST00000024627 Krtap9-1Q64526 186 aa2.46□□□□□ -2.02
Chd1-202ENSMUST00000024627 Gm6217A0A1Y7VJK9 128 aa2.27□□□□□ -2.05
Chd1-202ENSMUST00000024627 Eppk1Q8R0W0 6548 aa2.19□□□□□ -2.06
Chd1-202ENSMUST00000024627 Krtap6-2O08884 159 aa2.14□□□□□ -2.07
Chd1-202ENSMUST00000024627 Gm11567Q9D141 195 aa2.13□□□□□ -2.07
Chd1-202ENSMUST00000024627 Krtap28-10A0A1Y7VP58 119 aa2.11□□□□□ -2.07
Chd1-202ENSMUST00000024627 A0A1Y7VJ07 166 aa2.11□□□□□ -2.07
Chd1-202ENSMUST00000024627 Krtap28-13A0A087WQP5 138 aa2.06□□□□□ -2.08
Chd1-202ENSMUST00000024627 A030005L19RikA0A1Y7VIU2 113 aa2.02□□□□□ -2.09
Chd1-202ENSMUST00000024627 Gm7544A0A1Y7VJ58 118 aa1.99□□□□□ -2.09
Chd1-202ENSMUST00000024627 A030005K14RikA0A1Y7VNY1 122 aa1.98□□□□□ -2.09
Chd1-202ENSMUST00000024627 A0A1Y7VJH8 109 aa1.96□□□□□ -2.1
Chd1-202ENSMUST00000024627 Gpr98Q8VHN7 6298 aaKnown RBP1.92□□□□□ -2.1
Chd1-202ENSMUST00000024627 A030014E15RikA0A1Y7VJV2 120 aa1.89□□□□□ -2.11
Chd1-202ENSMUST00000024627 Krtap5-2Q9D5Z7 189 aa1.89□□□□□ -2.11
Chd1-202ENSMUST00000024627 Gm11639A0A1D5RLM8 5808 aa1.89□□□□□ -2.11
Chd1-202ENSMUST00000024627 Krtap21-1Q925H4 128 aa1.87□□□□□ -2.11
Chd1-202ENSMUST00000024627 Hmcn1D3YXG0 5634 aa1.84□□□□□ -2.11
Chd1-202ENSMUST00000024627 Gm4553A0A1B0GSA9 284 aa1.77□□□□□ -2.13
Chd1-202ENSMUST00000024627 Gm2431E9Q8S1 172 aa1.71□□□□□ -2.14
Chd1-202ENSMUST00000024627 AhnakE9Q616 5656 aaKnown RBP1.59□□□□□ -2.16
Chd1-202ENSMUST00000024627 Gm10153A0A1B0GRL1 320 aa1.51□□□□□ -2.17
Chd1-202ENSMUST00000024627 A0A286YCP9 139 aa1.48□□□□□ -2.17
Chd1-202ENSMUST00000024627 Gm45337A0A1B0GS71 263 aa1.36□□□□□ -2.19
Chd1-202ENSMUST00000024627 Gm39115A0A1B0GSH7 232 aa1.31□□□□□ -2.2
Chd1-202ENSMUST00000024627 Gm7579A0A1B0GRJ4 243 aa1.3□□□□□ -2.2
Chd1-202ENSMUST00000024627 Gm40460A0A1B0GR10 244 aa1.25□□□□□ -2.21
Chd1-202ENSMUST00000024627 Krtap5-5Q2TA51 241 aa1.25□□□□□ -2.21
Chd1-202ENSMUST00000024627 Krtap5-4Q62220 223 aa1.25□□□□□ -2.21
Chd1-202ENSMUST00000024627 Krtap5-1Q64507 230 aa1.19□□□□□ -2.22
Chd1-202ENSMUST00000024627 Gm45618A0A1B0GSA0 219 aa0.94□□□□□ -2.26
Chd1-202ENSMUST00000024627 Gm29735A0A1B0GT06 219 aa0.92□□□□□ -2.26
Chd1-202ENSMUST00000024627 Gm4559A4IF42 199 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 130 ms