RNA–Protein interactions for RNA: ENSMUST00000022115.13

Xrcc4-201, Transcript of DNA repair protein XRCC4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc4, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc4-201ENSMUST00000022115 Syne2Q6ZWQ0 6874 aaKnown RBP3.21□□□□□ -1.9
Xrcc4-201ENSMUST00000022115 Gm17402F6Z0L5 76 aa3.2□□□□□ -1.9
Xrcc4-201ENSMUST00000022115 CriptO70333 101 aa3.19□□□□□ -1.9
Xrcc4-201ENSMUST00000022115 Ndufs5Q99LY9 106 aa3.19□□□□□ -1.9
Xrcc4-201ENSMUST00000022115 Fat4Q2PZL6 4981 aa3.19□□□□□ -1.9
Xrcc4-201ENSMUST00000022115 Rnf213E9Q555 5152 aaKnown RBP3.17□□□□□ -1.9
Xrcc4-201ENSMUST00000022115 Prm2P07978 107 aa3.14□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 Pla2g10Q9QXX3 151 aa3.14□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 Spink7Q6IE32 76 aa3.14□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 B930094E09RikQ8C4T2 136 aa3.14□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 Gm3880A0A1B0GSB3 72 aa3.13□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 Sprr2a3Q4KL71 83 aa3.13□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 Sprr2a1Q9CQK8 83 aa3.13□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 Gm10061D3Z714 54 aa3.1□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 Krtap19-9aF8WH65 55 aa3.09□□□□□ -1.91
Xrcc4-201ENSMUST00000022115 SspoQ8CG65 4998 aa3.07□□□□□ -1.92
Xrcc4-201ENSMUST00000022115 Gm11564A2A4L9 201 aa3.05□□□□□ -1.92
Xrcc4-201ENSMUST00000022115 Krtap19-2Q925I0 141 aa3.03□□□□□ -1.92
Xrcc4-201ENSMUST00000022115 Gm12216A0A1W2P827 62 aa3.03□□□□□ -1.92
Xrcc4-201ENSMUST00000022115 Romo1P60603 79 aa3□□□□□ -1.93
Xrcc4-201ENSMUST00000022115 Camk2n1Q6QWF9 78 aa2.89□□□□□ -1.95
Xrcc4-201ENSMUST00000022115 Gm6358A0A087WPH4 74 aa2.88□□□□□ -1.95
Xrcc4-201ENSMUST00000022115 Gm40460A0A1B0GR10 244 aa2.87□□□□□ -1.95
Xrcc4-201ENSMUST00000022115 Muc5bE9Q5I3 4800 aa2.86□□□□□ -1.95
Xrcc4-201ENSMUST00000022115 Krtap8-1O08633 61 aa2.82□□□□□ -1.96
Xrcc4-201ENSMUST00000022115 Mt2P02798 61 aa2.8□□□□□ -1.96
Xrcc4-201ENSMUST00000022115 Krtap19-9bQ99NG9 58 aa2.79□□□□□ -1.96
Xrcc4-201ENSMUST00000022115 Gm40193A0A1B0GT39 78 aa2.74□□□□□ -1.97
Xrcc4-201ENSMUST00000022115 Krtap7-1Q9D3I6 87 aa2.74□□□□□ -1.97
Xrcc4-201ENSMUST00000022115 Kmt2dQ6PDK2 5588 aa2.72□□□□□ -1.97
Xrcc4-201ENSMUST00000022115 Krtap22-2J3QNX6 67 aa2.66□□□□□ -1.98
Xrcc4-201ENSMUST00000022115 Tnp1P10856 55 aa2.64□□□□□ -1.99
Xrcc4-201ENSMUST00000022115 Mdn1A2ANY6 5589 aaKnown RBP2.64□□□□□ -1.99
Xrcc4-201ENSMUST00000022115 Eppk1Q8R0W0 6548 aa2.63□□□□□ -1.99
Xrcc4-201ENSMUST00000022115 Fsip2A2ARZ3 6995 aa2.61□□□□□ -1.99
Xrcc4-201ENSMUST00000022115 Krtap6-3A0A087WQL6 57 aa2.61□□□□□ -1.99
Xrcc4-201ENSMUST00000022115 Mp68P56379 58 aa2.61□□□□□ -1.99
Xrcc4-201ENSMUST00000022115 Gpr98Q8VHN7 6298 aaKnown RBP2.61□□□□□ -1.99
Xrcc4-201ENSMUST00000022115 Gm11639A0A1D5RLM8 5808 aa2.54□□□□□ -2
Xrcc4-201ENSMUST00000022115 Hmcn1D3YXG0 5634 aa2.53□□□□□ -2
Xrcc4-201ENSMUST00000022115 2310046K23RikA0A0A6YVW6 87 aa2.52□□□□□ -2.01
Xrcc4-201ENSMUST00000022115 Mt4P47945 62 aa2.48□□□□□ -2.01
Xrcc4-201ENSMUST00000022115 Macf1Q9QXZ0 7354 aaKnown RBP2.48□□□□□ -2.01
Xrcc4-201ENSMUST00000022115 Krtap20-2E9Q0A8 60 aa2.4□□□□□ -2.03
Xrcc4-201ENSMUST00000022115 DstQ91ZU6 7393 aaKnown RBP2.37□□□□□ -2.03
Xrcc4-201ENSMUST00000022115 Lce3dE9Q8V1 98 aa2.36□□□□□ -2.03
Xrcc4-201ENSMUST00000022115 Lce3aQ497I5 98 aa2.36□□□□□ -2.03
Xrcc4-201ENSMUST00000022115 Sprr2kO70562 68 aa2.35□□□□□ -2.03
Xrcc4-201ENSMUST00000022115 Gm11938Q9D3H4 131 aa2.34□□□□□ -2.03
Xrcc4-201ENSMUST00000022115 Krtap6-5Q925H3 78 aa2.31□□□□□ -2.04
Xrcc4-201ENSMUST00000022115 Gm20538F6Z9R1 75 aa2.29□□□□□ -2.04
Xrcc4-201ENSMUST00000022115 Lce3bQ9CQM7 98 aa2.29□□□□□ -2.04
Xrcc4-201ENSMUST00000022115 Sprr2dO70555 85 aa2.27□□□□□ -2.05
Xrcc4-201ENSMUST00000022115 Sprr2gO70558 76 aa2.27□□□□□ -2.05
Xrcc4-201ENSMUST00000022115 Ndufaf8A2AMZ4 74 aa2.26□□□□□ -2.05
Xrcc4-201ENSMUST00000022115 Muc19Q6PZE0 7524 aa2.24□□□□□ -2.05
Xrcc4-201ENSMUST00000022115 Sprr2iO70560 76 aa2.2□□□□□ -2.06
Xrcc4-201ENSMUST00000022115 Krtap19-4Q925H7 84 aa2.2□□□□□ -2.06
Xrcc4-201ENSMUST00000022115 Syne1Q6ZWR6 8799 aa2.19□□□□□ -2.06
Xrcc4-201ENSMUST00000022115 Lce3cQ91V05 98 aa2.14□□□□□ -2.07
Xrcc4-201ENSMUST00000022115 4933428G20RikQ9D3X4 101 aa2.14□□□□□ -2.07
Xrcc4-201ENSMUST00000022115 Mt1P02802 61 aaKnown RBP2.12□□□□□ -2.07
Xrcc4-201ENSMUST00000022115 Lce3fQ6PAI4 98 aa2.12□□□□□ -2.07
Xrcc4-201ENSMUST00000022115 Lce3eF8VQJ0 98 aa2.09□□□□□ -2.07
Xrcc4-201ENSMUST00000022115 NebE9Q1W3 7152 aa2.09□□□□□ -2.08
Xrcc4-201ENSMUST00000022115 Gm10229O08631 77 aa2.02□□□□□ -2.09
Xrcc4-201ENSMUST00000022115 ObscnA2AAJ9 8891 aaKnown RBP1.96□□□□□ -2.1
Xrcc4-201ENSMUST00000022115 Sprr2hO70559 108 aa1.96□□□□□ -2.1
Xrcc4-201ENSMUST00000022115 Krtap4-16Q91W93 202 aa1.95□□□□□ -2.1
Xrcc4-201ENSMUST00000022115 AhnakE9Q616 5656 aaKnown RBP1.9□□□□□ -2.11
Xrcc4-201ENSMUST00000022115 Gm9112A2AI92 75 aa1.89□□□□□ -2.11
Xrcc4-201ENSMUST00000022115 Krtap6-2O08884 159 aa1.86□□□□□ -2.11
Xrcc4-201ENSMUST00000022115 Sprr2eO70556 76 aa1.83□□□□□ -2.12
Xrcc4-201ENSMUST00000022115 Gm10024A0A0A0MQA4 119 aa1.7□□□□□ -2.14
Xrcc4-201ENSMUST00000022115 Sprr2fO70557 76 aa1.66□□□□□ -2.14
Xrcc4-201ENSMUST00000022115 1110025L11RikO09048 78 aa1.59□□□□□ -2.16
Xrcc4-201ENSMUST00000022115 Muc16A0A140LJ72 8478 aa1.46□□□□□ -2.18
Xrcc4-201ENSMUST00000022115 Sprr2bO70554 98 aa1.38□□□□□ -2.19
Xrcc4-201ENSMUST00000022115 Krtap21-1Q925H4 128 aa1.37□□□□□ -2.19
Xrcc4-201ENSMUST00000022115 Phgr1Q8K0G7 91 aa1.16□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 370.4 ms