RNA–Protein interactions for RNA: ENSMUST00000021921.10

Ptch1-201, Transcript of Protein patched homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ptch1, Length 7,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1-201ENSMUST00000021921 Krtap4-13Q9D7P3 165 aa4.22□□□□□ -1.73
Ptch1-201ENSMUST00000021921 Mt3P28184 68 aa4.21□□□□□ -1.74
Ptch1-201ENSMUST00000021921 Gm11938Q9D3H4 131 aa4.17□□□□□ -1.74
Ptch1-201ENSMUST00000021921 Kmt2cQ8BRH4 4903 aa4.16□□□□□ -1.74
Ptch1-201ENSMUST00000021921 HydinQ80W93 5154 aa4.14□□□□□ -1.75
Ptch1-201ENSMUST00000021921 Ryr2E9Q401 4966 aaKnown RBP4.12□□□□□ -1.75
Ptch1-201ENSMUST00000021921 Herc2Q4U2R1 4836 aa4.12□□□□□ -1.75
Ptch1-201ENSMUST00000021921 Kiaa1109A2AAE1 5005 aa4.1□□□□□ -1.75
Ptch1-201ENSMUST00000021921 Gm11554B1AQB2 190 aa4.01□□□□□ -1.77
Ptch1-201ENSMUST00000021921 Abca13Q5SSE9 5034 aa3.96□□□□□ -1.78
Ptch1-201ENSMUST00000021921 Krtap17-1A2A5X6 109 aa3.95□□□□□ -1.78
Ptch1-201ENSMUST00000021921 Syne2Q6ZWQ0 6874 aaKnown RBP3.9□□□□□ -1.78
Ptch1-201ENSMUST00000021921 PcloQ9QYX7 5068 aa3.9□□□□□ -1.79
Ptch1-201ENSMUST00000021921 Dnhd1D3Z2X2 4750 aa3.84□□□□□ -1.79
Ptch1-201ENSMUST00000021921 Fsip2A2ARZ3 6995 aa3.81□□□□□ -1.8
Ptch1-201ENSMUST00000021921 Birc6O88738 4882 aa3.73□□□□□ -1.81
Ptch1-201ENSMUST00000021921 Herc1E9PZP8 4859 aa3.71□□□□□ -1.82
Ptch1-201ENSMUST00000021921 Syne1Q6ZWR6 8799 aa3.66□□□□□ -1.82
Ptch1-201ENSMUST00000021921 Krtap6-3A0A087WQL6 57 aa3.65□□□□□ -1.82
Ptch1-201ENSMUST00000021921 Ubr4A2AN08 5180 aa3.61□□□□□ -1.83
Ptch1-201ENSMUST00000021921 Hmcn2A2AJ76 5100 aa3.6□□□□□ -1.83
Ptch1-201ENSMUST00000021921 Mdn1A2ANY6 5589 aaKnown RBP3.58□□□□□ -1.84
Ptch1-201ENSMUST00000021921 ZanO88799 5376 aa3.56□□□□□ -1.84
Ptch1-201ENSMUST00000021921 4932415D10RikA0A1W2P6U8 4986 aa3.51□□□□□ -1.85
Ptch1-201ENSMUST00000021921 Fat4Q2PZL6 4981 aa3.46□□□□□ -1.86
Ptch1-201ENSMUST00000021921 Krtap20-2E9Q0A8 60 aa3.44□□□□□ -1.86
Ptch1-201ENSMUST00000021921 Mt1P02802 61 aaKnown RBP3.4□□□□□ -1.86
Ptch1-201ENSMUST00000021921 Gm11555B1AQ89 175 aa3.39□□□□□ -1.87
Ptch1-201ENSMUST00000021921 Ush2AQ2QI47 5193 aa3.38□□□□□ -1.87
Ptch1-201ENSMUST00000021921 Rnf213E9Q555 5152 aaKnown RBP3.32□□□□□ -1.88
Ptch1-201ENSMUST00000021921 Muc16A0A140LJ72 8478 aa3.25□□□□□ -1.89
Ptch1-201ENSMUST00000021921 Muc5bE9Q5I3 4800 aa3.18□□□□□ -1.9
Ptch1-201ENSMUST00000021921 ObscnA2AAJ9 8891 aaKnown RBP3.18□□□□□ -1.9
Ptch1-201ENSMUST00000021921 SspoQ8CG65 4998 aa3.01□□□□□ -1.93
Ptch1-201ENSMUST00000021921 Phgr1Q8K0G7 91 aa2.98□□□□□ -1.93
Ptch1-201ENSMUST00000021921 Gm11568A2A4M2 211 aa2.93□□□□□ -1.94
Ptch1-201ENSMUST00000021921 Gm10229O08631 77 aa2.93□□□□□ -1.94
Ptch1-201ENSMUST00000021921 Krtap9-1Q64526 186 aa2.93□□□□□ -1.94
Ptch1-201ENSMUST00000021921 Gm11559Q9D3H7 191 aa2.93□□□□□ -1.94
Ptch1-201ENSMUST00000021921 Macf1Q9QXZ0 7354 aaKnown RBP2.92□□□□□ -1.94
Ptch1-201ENSMUST00000021921 1110025L11RikO09048 78 aa2.91□□□□□ -1.94
Ptch1-201ENSMUST00000021921 Krtap6-5Q925H3 78 aa2.91□□□□□ -1.94
Ptch1-201ENSMUST00000021921 Muc19Q6PZE0 7524 aa2.9□□□□□ -1.95
Ptch1-201ENSMUST00000021921 DstQ91ZU6 7393 aaKnown RBP2.83□□□□□ -1.96
Ptch1-201ENSMUST00000021921 NebE9Q1W3 7152 aa2.76□□□□□ -1.97
Ptch1-201ENSMUST00000021921 Gm11567Q9D141 195 aa2.69□□□□□ -1.98
Ptch1-201ENSMUST00000021921 Eppk1Q8R0W0 6548 aa2.51□□□□□ -2.01
Ptch1-201ENSMUST00000021921 A0A1Y7VLE6 161 aa2.47□□□□□ -2.01
Ptch1-201ENSMUST00000021921 A030003K21RikA0A1Y7VIM3 128 aa2.31□□□□□ -2.04
Ptch1-201ENSMUST00000021921 Kmt2dQ6PDK2 5588 aa2.26□□□□□ -2.05
Ptch1-201ENSMUST00000021921 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Ptch1-201ENSMUST00000021921 Gm6217A0A1Y7VJK9 128 aa2.13□□□□□ -2.07
Ptch1-201ENSMUST00000021921 A0A1Y7VJH8 109 aa2.04□□□□□ -2.08
Ptch1-201ENSMUST00000021921 Hmcn1D3YXG0 5634 aa1.99□□□□□ -2.09
Ptch1-201ENSMUST00000021921 Krtap5-2Q9D5Z7 189 aa1.98□□□□□ -2.09
Ptch1-201ENSMUST00000021921 Krtap28-10A0A1Y7VP58 119 aa1.97□□□□□ -2.09
Ptch1-201ENSMUST00000021921 A0A1Y7VJ07 166 aa1.9□□□□□ -2.1
Ptch1-201ENSMUST00000021921 Krtap21-1Q925H4 128 aa1.9□□□□□ -2.11
Ptch1-201ENSMUST00000021921 A030005K14RikA0A1Y7VNY1 122 aa1.9□□□□□ -2.11
Ptch1-201ENSMUST00000021921 Krtap28-13A0A087WQP5 138 aa1.89□□□□□ -2.11
Ptch1-201ENSMUST00000021921 A030005L19RikA0A1Y7VIU2 113 aa1.84□□□□□ -2.12
Ptch1-201ENSMUST00000021921 Gm2431E9Q8S1 172 aa1.84□□□□□ -2.12
Ptch1-201ENSMUST00000021921 Gm7544A0A1Y7VJ58 118 aa1.83□□□□□ -2.12
Ptch1-201ENSMUST00000021921 Gm10153A0A1B0GRL1 320 aa1.81□□□□□ -2.12
Ptch1-201ENSMUST00000021921 Gm4553A0A1B0GSA9 284 aa1.8□□□□□ -2.12
Ptch1-201ENSMUST00000021921 Gm11639A0A1D5RLM8 5808 aa1.76□□□□□ -2.13
Ptch1-201ENSMUST00000021921 A030014E15RikA0A1Y7VJV2 120 aa1.72□□□□□ -2.13
Ptch1-201ENSMUST00000021921 Gpr98Q8VHN7 6298 aaKnown RBP1.69□□□□□ -2.14
Ptch1-201ENSMUST00000021921 AhnakE9Q616 5656 aaKnown RBP1.65□□□□□ -2.14
Ptch1-201ENSMUST00000021921 Gm45337A0A1B0GS71 263 aa1.61□□□□□ -2.15
Ptch1-201ENSMUST00000021921 Gm40460A0A1B0GR10 244 aa1.56□□□□□ -2.16
Ptch1-201ENSMUST00000021921 Gm7579A0A1B0GRJ4 243 aa1.56□□□□□ -2.16
Ptch1-201ENSMUST00000021921 Krtap5-5Q2TA51 241 aa1.56□□□□□ -2.16
Ptch1-201ENSMUST00000021921 Krtap5-4Q62220 223 aa1.56□□□□□ -2.16
Ptch1-201ENSMUST00000021921 Gm39115A0A1B0GSH7 232 aa1.42□□□□□ -2.18
Ptch1-201ENSMUST00000021921 A0A286YCP9 139 aa1.4□□□□□ -2.19
Ptch1-201ENSMUST00000021921 Gm29735A0A1B0GT06 219 aa1.19□□□□□ -2.22
Ptch1-201ENSMUST00000021921 Krtap5-1Q64507 230 aa1.12□□□□□ -2.23
Ptch1-201ENSMUST00000021921 Gm45618A0A1B0GSA0 219 aa1.1□□□□□ -2.23
Ptch1-201ENSMUST00000021921 Gm4559A4IF42 199 aa0.67□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 62.1 ms