RNA–Protein interactions for RNA: ENSMUST00000005218.14

Cd44-201, Transcript of CD44 antigen, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cd44, Length 5,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-201ENSMUST00000005218 Lce1dQ9D731 133 aa2.25□□□□□ -2.05
Cd44-201ENSMUST00000005218 Lce1bQ9D149 137 aa2.24□□□□□ -2.05
Cd44-201ENSMUST00000005218 Ubr4A2AN08 5180 aa2.24□□□□□ -2.05
Cd44-201ENSMUST00000005218 4932415D10RikA0A1W2P6U8 4986 aa2.24□□□□□ -2.05
Cd44-201ENSMUST00000005218 Mdn1A2ANY6 5589 aaKnown RBP2.23□□□□□ -2.05
Cd44-201ENSMUST00000005218 Fat4Q2PZL6 4981 aa2.22□□□□□ -2.05
Cd44-201ENSMUST00000005218 Lce1eQ9D139 143 aa2.21□□□□□ -2.06
Cd44-201ENSMUST00000005218 Mt4P47945 62 aa2.2□□□□□ -2.06
Cd44-201ENSMUST00000005218 ZanO88799 5376 aa2.2□□□□□ -2.06
Cd44-201ENSMUST00000005218 Hmcn2A2AJ76 5100 aa2.19□□□□□ -2.06
Cd44-201ENSMUST00000005218 Gm10024A0A0A0MQA4 119 aa2.18□□□□□ -2.06
Cd44-201ENSMUST00000005218 Krtap19-4Q925H7 84 aa2.18□□□□□ -2.06
Cd44-201ENSMUST00000005218 Krtap4-6Q3V4B7 195 aa2.18□□□□□ -2.06
Cd44-201ENSMUST00000005218 Ush2AQ2QI47 5193 aa2.16□□□□□ -2.06
Cd44-201ENSMUST00000005218 Sprr2eO70556 76 aa2.12□□□□□ -2.07
Cd44-201ENSMUST00000005218 Rnf213E9Q555 5152 aaKnown RBP2.11□□□□□ -2.07
Cd44-201ENSMUST00000005218 Muc5bE9Q5I3 4800 aa2.05□□□□□ -2.08
Cd44-201ENSMUST00000005218 Gm11938Q9D3H4 131 aa2.05□□□□□ -2.08
Cd44-201ENSMUST00000005218 Sprr2fO70557 76 aa2.04□□□□□ -2.08
Cd44-201ENSMUST00000005218 Sprr2dO70555 85 aa2.04□□□□□ -2.08
Cd44-201ENSMUST00000005218 Krtap31-1Q9D644 177 aa2.03□□□□□ -2.08
Cd44-201ENSMUST00000005218 Gm11564A2A4L9 201 aa2.02□□□□□ -2.09
Cd44-201ENSMUST00000005218 2300003K06RikA2A4M0 262 aa2.02□□□□□ -2.09
Cd44-201ENSMUST00000005218 Gm11595B1AQA7 289 aa2.02□□□□□ -2.09
Cd44-201ENSMUST00000005218 Krtap4-8B1AQA8 209 aa2.02□□□□□ -2.09
Cd44-201ENSMUST00000005218 Gm11596B1AQB0 205 aa2.02□□□□□ -2.09
Cd44-201ENSMUST00000005218 Fsip2A2ARZ3 6995 aa2.02□□□□□ -2.09
Cd44-201ENSMUST00000005218 Krtap4-9B1AQA9 244 aa2.01□□□□□ -2.09
Cd44-201ENSMUST00000005218 Gm11562A0PK51 136 aa2□□□□□ -2.09
Cd44-201ENSMUST00000005218 Syne1Q6ZWR6 8799 aa1.99□□□□□ -2.09
Cd44-201ENSMUST00000005218 Lce1kJ3QP15 125 aa1.98□□□□□ -2.09
Cd44-201ENSMUST00000005218 Krtap4-13Q9D7P3 165 aa1.98□□□□□ -2.09
Cd44-201ENSMUST00000005218 Sprr2hO70559 108 aa1.97□□□□□ -2.09
Cd44-201ENSMUST00000005218 Syne2Q6ZWQ0 6874 aaKnown RBP1.97□□□□□ -2.09
Cd44-201ENSMUST00000005218 Krtap4-16Q91W93 202 aa1.93□□□□□ -2.1
Cd44-201ENSMUST00000005218 SspoQ8CG65 4998 aa1.93□□□□□ -2.1
Cd44-201ENSMUST00000005218 Lce1a1Q9CQH5 143 aa1.91□□□□□ -2.1
Cd44-201ENSMUST00000005218 Krtap31-2Q8CAY5 177 aa1.9□□□□□ -2.1
Cd44-201ENSMUST00000005218 Gm45618A0A1B0GSA0 219 aa1.85□□□□□ -2.11
Cd44-201ENSMUST00000005218 Mt3P28184 68 aa1.84□□□□□ -2.11
Cd44-201ENSMUST00000005218 Mt1P02802 61 aaKnown RBP1.77□□□□□ -2.13
Cd44-201ENSMUST00000005218 Gm11554B1AQB2 190 aa1.75□□□□□ -2.13
Cd44-201ENSMUST00000005218 Krtap20-2E9Q0A8 60 aa1.73□□□□□ -2.13
Cd44-201ENSMUST00000005218 Krtap6-3A0A087WQL6 57 aa1.72□□□□□ -2.13
Cd44-201ENSMUST00000005218 Muc16A0A140LJ72 8478 aa1.71□□□□□ -2.14
Cd44-201ENSMUST00000005218 Gm39115A0A1B0GSH7 232 aa1.68□□□□□ -2.14
Cd44-201ENSMUST00000005218 Gm2431E9Q8S1 172 aa1.64□□□□□ -2.15
Cd44-201ENSMUST00000005218 Gm29735A0A1B0GT06 219 aa1.64□□□□□ -2.15
Cd44-201ENSMUST00000005218 Macf1Q9QXZ0 7354 aaKnown RBP1.59□□□□□ -2.15
Cd44-201ENSMUST00000005218 ObscnA2AAJ9 8891 aaKnown RBP1.59□□□□□ -2.16
Cd44-201ENSMUST00000005218 Sprr2bO70554 98 aa1.57□□□□□ -2.16
Cd44-201ENSMUST00000005218 Gm45337A0A1B0GS71 263 aa1.57□□□□□ -2.16
Cd44-201ENSMUST00000005218 DstQ91ZU6 7393 aaKnown RBP1.52□□□□□ -2.17
Cd44-201ENSMUST00000005218 Gm11559Q9D3H7 191 aa1.5□□□□□ -2.17
Cd44-201ENSMUST00000005218 NebE9Q1W3 7152 aa1.49□□□□□ -2.17
Cd44-201ENSMUST00000005218 Kmt2dQ6PDK2 5588 aa1.48□□□□□ -2.17
Cd44-201ENSMUST00000005218 Muc19Q6PZE0 7524 aa1.47□□□□□ -2.17
Cd44-201ENSMUST00000005218 Gm10153A0A1B0GRL1 320 aa1.47□□□□□ -2.17
Cd44-201ENSMUST00000005218 Eppk1Q8R0W0 6548 aa1.46□□□□□ -2.18
Cd44-201ENSMUST00000005218 Gm11568A2A4M2 211 aa1.44□□□□□ -2.18
Cd44-201ENSMUST00000005218 Krtap9-1Q64526 186 aa1.44□□□□□ -2.18
Cd44-201ENSMUST00000005218 1110025L11RikO09048 78 aa1.44□□□□□ -2.18
Cd44-201ENSMUST00000005218 Krtap6-5Q925H3 78 aa1.44□□□□□ -2.18
Cd44-201ENSMUST00000005218 Krtap5-4Q62220 223 aa1.43□□□□□ -2.18
Cd44-201ENSMUST00000005218 Krtap5-2Q9D5Z7 189 aa1.38□□□□□ -2.19
Cd44-201ENSMUST00000005218 Gm10229O08631 77 aa1.35□□□□□ -2.19
Cd44-201ENSMUST00000005218 Hmcn1D3YXG0 5634 aa1.32□□□□□ -2.2
Cd44-201ENSMUST00000005218 Gm4553A0A1B0GSA9 284 aa1.31□□□□□ -2.2
Cd44-201ENSMUST00000005218 Phgr1Q8K0G7 91 aa1.29□□□□□ -2.2
Cd44-201ENSMUST00000005218 Krtap5-1Q64507 230 aa1.26□□□□□ -2.21
Cd44-201ENSMUST00000005218 Gpr98Q8VHN7 6298 aaKnown RBP1.26□□□□□ -2.21
Cd44-201ENSMUST00000005218 Gm11639A0A1D5RLM8 5808 aa1.2□□□□□ -2.22
Cd44-201ENSMUST00000005218 Gm11567Q9D141 195 aa1.17□□□□□ -2.22
Cd44-201ENSMUST00000005218 Gm4559A4IF42 199 aa1.17□□□□□ -2.22
Cd44-201ENSMUST00000005218 Krtap5-5Q2TA51 241 aa1.1□□□□□ -2.23
Cd44-201ENSMUST00000005218 Krtap6-2O08884 159 aa1.09□□□□□ -2.24
Cd44-201ENSMUST00000005218 AhnakE9Q616 5656 aaKnown RBP1.08□□□□□ -2.24
Cd44-201ENSMUST00000005218 Krtap21-1Q925H4 128 aa1.04□□□□□ -2.24
Cd44-201ENSMUST00000005218 Gm7579A0A1B0GRJ4 243 aa1.04□□□□□ -2.24
Cd44-201ENSMUST00000005218 Gm40460A0A1B0GR10 244 aa1.01□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 6.5 ms