RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Sprr2a3Q4KL71 83 aa4.71□□□□□ -1.66
Chd3-202ENSMUST00000108661 Sprr2a1Q9CQK8 83 aa4.71□□□□□ -1.66
Chd3-202ENSMUST00000108661 Dnah5Q8VHE6 4621 aa4.69□□□□□ -1.66
Chd3-202ENSMUST00000108661 2310046K23RikA0A0A6YVW6 87 aa4.69□□□□□ -1.66
Chd3-202ENSMUST00000108661 Prm1P02319 51 aa4.66□□□□□ -1.66
Chd3-202ENSMUST00000108661 PrkdcP97313 4128 aa4.65□□□□□ -1.66
Chd3-202ENSMUST00000108661 Hspg2Q05793 3707 aaKnown RBP4.63□□□□□ -1.67
Chd3-202ENSMUST00000108661 Dnah3Q8BW94 4083 aa4.62□□□□□ -1.67
Chd3-202ENSMUST00000108661 Dync2h1Q45VK7 4306 aa4.62□□□□□ -1.67
Chd3-202ENSMUST00000108661 Stard9Q80TF6 4561 aa4.6□□□□□ -1.67
Chd3-202ENSMUST00000108661 PlecQ9QXS1 4691 aaKnown RBP4.59□□□□□ -1.67
Chd3-202ENSMUST00000108661 Dnah17Q69Z23 4481 aa4.59□□□□□ -1.67
Chd3-202ENSMUST00000108661 Dnah1E9Q8T7 4250 aa4.58□□□□□ -1.68
Chd3-202ENSMUST00000108661 Lce3bQ9CQM7 98 aa4.56□□□□□ -1.68
Chd3-202ENSMUST00000108661 Krtap9-5A2A5X3 358 aa4.55□□□□□ -1.68
Chd3-202ENSMUST00000108661 Dnah7bL7N1Y0 4068 aa4.54□□□□□ -1.68
Chd3-202ENSMUST00000108661 Pkd1O08852 4293 aa4.5□□□□□ -1.69
Chd3-202ENSMUST00000108661 ApobE9Q414 4505 aa4.49□□□□□ -1.69
Chd3-202ENSMUST00000108661 Gm38119A0A0A6YX29 146 aa4.48□□□□□ -1.69
Chd3-202ENSMUST00000108661 Sprr2iO70560 76 aa4.46□□□□□ -1.7
Chd3-202ENSMUST00000108661 Gm7735D3YX18 52 aa4.45□□□□□ -1.7
Chd3-202ENSMUST00000108661 Dnah11E9Q7N9 4488 aa4.45□□□□□ -1.7
Chd3-202ENSMUST00000108661 Fras1Q80T14 4010 aa4.44□□□□□ -1.7
Chd3-202ENSMUST00000108661 Dnah2P0C6F1 4456 aa4.43□□□□□ -1.7
Chd3-202ENSMUST00000108661 Kmt2aP55200 3966 aa4.42□□□□□ -1.7
Chd3-202ENSMUST00000108661 Fat1A0A1L1SQU7 4645 aa4.42□□□□□ -1.7
Chd3-202ENSMUST00000108661 Lce3cQ91V05 98 aa4.4□□□□□ -1.7
Chd3-202ENSMUST00000108661 Dnah6E9Q0B6 4144 aa4.4□□□□□ -1.71
Chd3-202ENSMUST00000108661 Krtap19-3Q925H6 87 aa4.39□□□□□ -1.71
Chd3-202ENSMUST00000108661 Dync1h1Q9JHU4 4644 aaKnown RBP4.38□□□□□ -1.71
Chd3-202ENSMUST00000108661 Dnah9B1AR51 4484 aa4.38□□□□□ -1.71
Chd3-202ENSMUST00000108661 Krtap16-3Q8C1I6 86 aa4.36□□□□□ -1.71
Chd3-202ENSMUST00000108661 Sprr2fO70557 76 aa4.31□□□□□ -1.72
Chd3-202ENSMUST00000108661 Gm9789Q8BIG3 52 aa4.31□□□□□ -1.72
Chd3-202ENSMUST00000108661 Gm10272F7CZ33 110 aa4.31□□□□□ -1.72
Chd3-202ENSMUST00000108661 Dnah7cA0A087WR13 4024 aa4.31□□□□□ -1.72
Chd3-202ENSMUST00000108661 SacsQ9JLC8 4582 aa4.31□□□□□ -1.72
Chd3-202ENSMUST00000108661 Mycbp2Q7TPH6 4711 aa4.28□□□□□ -1.72
Chd3-202ENSMUST00000108661 Krtap22-2J3QNX6 67 aa4.26□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lce1jD3YUU5 139 aa4.26□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lce3dE9Q8V1 98 aa4.26□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lce1gQ9D195 139 aa4.26□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lce1iQ9D6P5 149 aa4.26□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lce1hQ9D6R3 140 aa4.26□□□□□ -1.73
Chd3-202ENSMUST00000108661 Gm11569B1AQB1 180 aa4.25□□□□□ -1.73
Chd3-202ENSMUST00000108661 Krtap4-2B1AQ85 167 aa4.24□□□□□ -1.73
Chd3-202ENSMUST00000108661 Dnah7aE9Q0T8 4024 aa4.24□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lrp1bQ9JI18 4599 aa4.24□□□□□ -1.73
Chd3-202ENSMUST00000108661 Krtap1-3A2A588 173 aa4.23□□□□□ -1.73
Chd3-202ENSMUST00000108661 Mt2P02798 61 aa4.23□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lce3eF8VQJ0 98 aa4.22□□□□□ -1.73
Chd3-202ENSMUST00000108661 Lce3fQ6PAI4 98 aa4.22□□□□□ -1.73
Chd3-202ENSMUST00000108661 Gm10100J3QK64 120 aa4.22□□□□□ -1.73
Chd3-202ENSMUST00000108661 Krtap19-1Q925H2 87 aa4.22□□□□□ -1.73
Chd3-202ENSMUST00000108661 Gm10061D3Z714 54 aa4.17□□□□□ -1.74
Chd3-202ENSMUST00000108661 Vps13bQ80TY5 3993 aa4.16□□□□□ -1.74
Chd3-202ENSMUST00000108661 Krtap19-2Q925I0 141 aa4.13□□□□□ -1.75
Chd3-202ENSMUST00000108661 Lce1bQ9D149 137 aa4.13□□□□□ -1.75
Chd3-202ENSMUST00000108661 Fat3Q8BNA6 4555 aa4.11□□□□□ -1.75
Chd3-202ENSMUST00000108661 Lce3aQ497I5 98 aa4.1□□□□□ -1.75
Chd3-202ENSMUST00000108661 Lce1fB9EJP6 147 aa4.1□□□□□ -1.75
Chd3-202ENSMUST00000108661 Lce1cQ9D1C5 147 aa4.1□□□□□ -1.75
Chd3-202ENSMUST00000108661 Lce1lQ9D1G7 135 aa4.1□□□□□ -1.75
Chd3-202ENSMUST00000108661 Lce1dQ9D731 133 aa4.1□□□□□ -1.75
Chd3-202ENSMUST00000108661 Dnhd1D3Z2X2 4750 aa4.1□□□□□ -1.75
Chd3-202ENSMUST00000108661 Hectd4E9Q2E4 4418 aa4.09□□□□□ -1.75
Chd3-202ENSMUST00000108661 Gm10142J3KMP7 120 aa4.09□□□□□ -1.75
Chd3-202ENSMUST00000108661 Mt4P47945 62 aa4.09□□□□□ -1.76
Chd3-202ENSMUST00000108661 Ryr1E9PZQ0 5035 aa4.07□□□□□ -1.76
Chd3-202ENSMUST00000108661 Dnah8Q91XQ0 4731 aa4.04□□□□□ -1.76
Chd3-202ENSMUST00000108661 Krtap4-6Q3V4B7 195 aa4.02□□□□□ -1.77
Chd3-202ENSMUST00000108661 Sprr2eO70556 76 aa4.02□□□□□ -1.77
Chd3-202ENSMUST00000108661 Krtap9-3Q3V2C1 136 aa3.98□□□□□ -1.77
Chd3-202ENSMUST00000108661 Lce1eQ9D139 143 aa3.96□□□□□ -1.78
Chd3-202ENSMUST00000108661 Lrp1Q91ZX7 4545 aaKnown RBP3.93□□□□□ -1.78
Chd3-202ENSMUST00000108661 Fat2Q5F226 4351 aa3.91□□□□□ -1.78
Chd3-202ENSMUST00000108661 Pkhd1E9PZ36 4059 aa3.91□□□□□ -1.78
Chd3-202ENSMUST00000108661 Gm10024A0A0A0MQA4 119 aa3.89□□□□□ -1.79
Chd3-202ENSMUST00000108661 Gm11596B1AQB0 205 aa3.89□□□□□ -1.79
Chd3-202ENSMUST00000108661 Krtap19-4Q925H7 84 aa3.89□□□□□ -1.79
Chd3-202ENSMUST00000108661 Ryr2E9Q401 4966 aaKnown RBP3.86□□□□□ -1.79
Chd3-202ENSMUST00000108661 Krtap4-1Q3UUY3 169 aa3.85□□□□□ -1.79
Chd3-202ENSMUST00000108661 Lrp2A2ARV4 4660 aa3.85□□□□□ -1.79
Chd3-202ENSMUST00000108661 Pkhd1l1Q80ZA4 4249 aa3.84□□□□□ -1.79
Chd3-202ENSMUST00000108661 Ryr3A2AGL3 4863 aa3.82□□□□□ -1.8
Chd3-202ENSMUST00000108661 Herc2Q4U2R1 4836 aa3.8□□□□□ -1.8
Chd3-202ENSMUST00000108661 Gm11564A2A4L9 201 aa3.79□□□□□ -1.8
Chd3-202ENSMUST00000108661 Gm11563B1AQ90 168 aa3.79□□□□□ -1.8
Chd3-202ENSMUST00000108661 Gm11595B1AQA7 289 aa3.79□□□□□ -1.8
Chd3-202ENSMUST00000108661 Krtap4-8B1AQA8 209 aa3.79□□□□□ -1.8
Chd3-202ENSMUST00000108661 Herc1E9PZP8 4859 aa3.77□□□□□ -1.81
Chd3-202ENSMUST00000108661 2300003K06RikA2A4M0 262 aa3.75□□□□□ -1.81
Chd3-202ENSMUST00000108661 Krtap4-9B1AQA9 244 aa3.74□□□□□ -1.81
Chd3-202ENSMUST00000108661 Krtap4-7Q9D732 168 aa3.73□□□□□ -1.81
Chd3-202ENSMUST00000108661 HydinQ80W93 5154 aa3.7□□□□□ -1.82
Chd3-202ENSMUST00000108661 Krtap17-1A2A5X6 109 aa3.67□□□□□ -1.82
Chd3-202ENSMUST00000108661 Krtap4-13Q9D7P3 165 aa3.65□□□□□ -1.83
Chd3-202ENSMUST00000108661 PcloQ9QYX7 5068 aa3.61□□□□□ -1.83
Chd3-202ENSMUST00000108661 Sprr2hO70559 108 aa3.6□□□□□ -1.83
Chd3-202ENSMUST00000108661 Kmt2cQ8BRH4 4903 aa3.6□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 76 ms