RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 Krtap3-3Q9D7P0 99 aa5.82□□□□□ -1.48
Chd1-202ENSMUST00000024627 Fras1Q80T14 4010 aa5.79□□□□□ -1.48
Chd1-202ENSMUST00000024627 TnxbO35452 4006 aa5.73□□□□□ -1.49
Chd1-202ENSMUST00000024627 Dnah10D3YYQ8 4591 aa5.72□□□□□ -1.49
Chd1-202ENSMUST00000024627 Krtap19-9bQ99NG9 58 aa5.66□□□□□ -1.5
Chd1-202ENSMUST00000024627 Krtap1-5A2A590 122 aa5.65□□□□□ -1.51
Chd1-202ENSMUST00000024627 Krtap12-1Q9Z287 130 aa5.64□□□□□ -1.51
Chd1-202ENSMUST00000024627 Sprr2a3Q4KL71 83 aa5.62□□□□□ -1.51
Chd1-202ENSMUST00000024627 Sprr2a1Q9CQK8 83 aa5.62□□□□□ -1.51
Chd1-202ENSMUST00000024627 Krtap1-4Q3V2D6 188 aa5.61□□□□□ -1.51
Chd1-202ENSMUST00000024627 Dnah2P0C6F1 4456 aa5.54□□□□□ -1.52
Chd1-202ENSMUST00000024627 Dnah1E9Q8T7 4250 aa5.52□□□□□ -1.53
Chd1-202ENSMUST00000024627 2310046K23RikA0A0A6YVW6 87 aa5.52□□□□□ -1.53
Chd1-202ENSMUST00000024627 Dnah11E9Q7N9 4488 aa5.52□□□□□ -1.53
Chd1-202ENSMUST00000024627 Lce3bQ9CQM7 98 aa5.51□□□□□ -1.53
Chd1-202ENSMUST00000024627 Lce3cQ91V05 98 aa5.46□□□□□ -1.54
Chd1-202ENSMUST00000024627 Lce1mQ9CR91 182 aa5.45□□□□□ -1.54
Chd1-202ENSMUST00000024627 Dync2h1Q45VK7 4306 aa5.41□□□□□ -1.54
Chd1-202ENSMUST00000024627 Dnah5Q8VHE6 4621 aa5.39□□□□□ -1.55
Chd1-202ENSMUST00000024627 Vps13dB1ART2 4390 aa5.37□□□□□ -1.55
Chd1-202ENSMUST00000024627 Gm10272F7CZ33 110 aa5.36□□□□□ -1.55
Chd1-202ENSMUST00000024627 Stard9Q80TF6 4561 aa5.35□□□□□ -1.55
Chd1-202ENSMUST00000024627 Pkhd1E9PZ36 4059 aa5.35□□□□□ -1.55
Chd1-202ENSMUST00000024627 Gm38119A0A0A6YX29 146 aa5.32□□□□□ -1.56
Chd1-202ENSMUST00000024627 ApobE9Q414 4505 aa5.3□□□□□ -1.56
Chd1-202ENSMUST00000024627 Pkd1O08852 4293 aa5.3□□□□□ -1.56
Chd1-202ENSMUST00000024627 Gm10100J3QK64 120 aa5.29□□□□□ -1.56
Chd1-202ENSMUST00000024627 Lce3eF8VQJ0 98 aa5.27□□□□□ -1.57
Chd1-202ENSMUST00000024627 Lce3fQ6PAI4 98 aa5.27□□□□□ -1.57
Chd1-202ENSMUST00000024627 Sprr2iO70560 76 aa5.27□□□□□ -1.57
Chd1-202ENSMUST00000024627 Fat3Q8BNA6 4555 aa5.24□□□□□ -1.57
Chd1-202ENSMUST00000024627 Krtap9-5A2A5X3 358 aa5.23□□□□□ -1.57
Chd1-202ENSMUST00000024627 Lce1jD3YUU5 139 aa5.22□□□□□ -1.57
Chd1-202ENSMUST00000024627 Lce1gQ9D195 139 aa5.22□□□□□ -1.57
Chd1-202ENSMUST00000024627 Lce1iQ9D6P5 149 aa5.22□□□□□ -1.57
Chd1-202ENSMUST00000024627 Lce1hQ9D6R3 140 aa5.22□□□□□ -1.57
Chd1-202ENSMUST00000024627 Fat2Q5F226 4351 aa5.19□□□□□ -1.58
Chd1-202ENSMUST00000024627 Dnah17Q69Z23 4481 aa5.19□□□□□ -1.58
Chd1-202ENSMUST00000024627 Lce3dE9Q8V1 98 aa5.18□□□□□ -1.58
Chd1-202ENSMUST00000024627 Dnah9B1AR51 4484 aa5.17□□□□□ -1.58
Chd1-202ENSMUST00000024627 Lrp1Q91ZX7 4545 aaKnown RBP5.16□□□□□ -1.58
Chd1-202ENSMUST00000024627 Mycbp2Q7TPH6 4711 aa5.14□□□□□ -1.59
Chd1-202ENSMUST00000024627 Sprr2fO70557 76 aa5.13□□□□□ -1.59
Chd1-202ENSMUST00000024627 Gm10142J3KMP7 120 aa5.1□□□□□ -1.59
Chd1-202ENSMUST00000024627 Lce3aQ497I5 98 aa5.07□□□□□ -1.6
Chd1-202ENSMUST00000024627 Hectd4E9Q2E4 4418 aa5.07□□□□□ -1.6
Chd1-202ENSMUST00000024627 Krtap19-3Q925H6 87 aa5.05□□□□□ -1.6
Chd1-202ENSMUST00000024627 Pkhd1l1Q80ZA4 4249 aa5.04□□□□□ -1.6
Chd1-202ENSMUST00000024627 Krtap16-3Q8C1I6 86 aa5.01□□□□□ -1.61
Chd1-202ENSMUST00000024627 PlecQ9QXS1 4691 aaKnown RBP5□□□□□ -1.61
Chd1-202ENSMUST00000024627 Lce1bQ9D149 137 aa4.97□□□□□ -1.61
Chd1-202ENSMUST00000024627 Fat1A0A1L1SQU7 4645 aa4.92□□□□□ -1.62
Chd1-202ENSMUST00000024627 Sprr2eO70556 76 aa4.9□□□□□ -1.62
Chd1-202ENSMUST00000024627 Mt2P02798 61 aa4.9□□□□□ -1.63
Chd1-202ENSMUST00000024627 Lrp1bQ9JI18 4599 aa4.9□□□□□ -1.63
Chd1-202ENSMUST00000024627 Gm10024A0A0A0MQA4 119 aa4.87□□□□□ -1.63
Chd1-202ENSMUST00000024627 Lce1fB9EJP6 147 aa4.87□□□□□ -1.63
Chd1-202ENSMUST00000024627 Lce1cQ9D1C5 147 aa4.87□□□□□ -1.63
Chd1-202ENSMUST00000024627 Lce1lQ9D1G7 135 aa4.87□□□□□ -1.63
Chd1-202ENSMUST00000024627 Lce1dQ9D731 133 aa4.87□□□□□ -1.63
Chd1-202ENSMUST00000024627 Krtap22-2J3QNX6 67 aa4.86□□□□□ -1.63
Chd1-202ENSMUST00000024627 SacsQ9JLC8 4582 aa4.84□□□□□ -1.63
Chd1-202ENSMUST00000024627 Lce1eQ9D139 143 aa4.81□□□□□ -1.64
Chd1-202ENSMUST00000024627 Dync1h1Q9JHU4 4644 aaKnown RBP4.78□□□□□ -1.64
Chd1-202ENSMUST00000024627 Prm1P02319 51 aa4.73□□□□□ -1.65
Chd1-202ENSMUST00000024627 Mt4P47945 62 aa4.69□□□□□ -1.66
Chd1-202ENSMUST00000024627 Krtap19-2Q925I0 141 aa4.67□□□□□ -1.66
Chd1-202ENSMUST00000024627 Krtap1-3A2A588 173 aa4.63□□□□□ -1.67
Chd1-202ENSMUST00000024627 Gm11569B1AQB1 180 aa4.63□□□□□ -1.67
Chd1-202ENSMUST00000024627 Krtap19-1Q925H2 87 aa4.63□□□□□ -1.67
Chd1-202ENSMUST00000024627 Gm7735D3YX18 52 aa4.58□□□□□ -1.68
Chd1-202ENSMUST00000024627 Krtap4-2B1AQ85 167 aa4.56□□□□□ -1.68
Chd1-202ENSMUST00000024627 Lrp2A2ARV4 4660 aa4.52□□□□□ -1.69
Chd1-202ENSMUST00000024627 Krtap19-4Q925H7 84 aa4.5□□□□□ -1.69
Chd1-202ENSMUST00000024627 Krtap4-6Q3V4B7 195 aa4.49□□□□□ -1.69
Chd1-202ENSMUST00000024627 Gm9789Q8BIG3 52 aa4.46□□□□□ -1.7
Chd1-202ENSMUST00000024627 Gm10061D3Z714 54 aa4.45□□□□□ -1.7
Chd1-202ENSMUST00000024627 Krtap9-3Q3V2C1 136 aa4.4□□□□□ -1.71
Chd1-202ENSMUST00000024627 Dnah8Q91XQ0 4731 aa4.35□□□□□ -1.71
Chd1-202ENSMUST00000024627 Sprr2hO70559 108 aa4.34□□□□□ -1.72
Chd1-202ENSMUST00000024627 Sprr2dO70555 85 aa4.3□□□□□ -1.72
Chd1-202ENSMUST00000024627 Kmt2cQ8BRH4 4903 aa4.27□□□□□ -1.73
Chd1-202ENSMUST00000024627 Ryr1E9PZQ0 5035 aa4.27□□□□□ -1.73
Chd1-202ENSMUST00000024627 2300003K06RikA2A4M0 262 aa4.24□□□□□ -1.73
Chd1-202ENSMUST00000024627 Krtap4-7Q9D732 168 aa4.22□□□□□ -1.73
Chd1-202ENSMUST00000024627 Krtap4-1Q3UUY3 169 aa4.2□□□□□ -1.74
Chd1-202ENSMUST00000024627 Gm11596B1AQB0 205 aa4.16□□□□□ -1.74
Chd1-202ENSMUST00000024627 Krtap4-9B1AQA9 244 aa4.14□□□□□ -1.75
Chd1-202ENSMUST00000024627 Syne2Q6ZWQ0 6874 aaKnown RBP4.14□□□□□ -1.75
Chd1-202ENSMUST00000024627 Gm11564A2A4L9 201 aa4.12□□□□□ -1.75
Chd1-202ENSMUST00000024627 Gm11563B1AQ90 168 aa4.12□□□□□ -1.75
Chd1-202ENSMUST00000024627 Gm11595B1AQA7 289 aa4.12□□□□□ -1.75
Chd1-202ENSMUST00000024627 Krtap4-8B1AQA8 209 aa4.12□□□□□ -1.75
Chd1-202ENSMUST00000024627 Krtap4-13Q9D7P3 165 aa4.1□□□□□ -1.75
Chd1-202ENSMUST00000024627 Krtap31-1Q9D644 177 aa4.07□□□□□ -1.76
Chd1-202ENSMUST00000024627 Gm11562A0PK51 136 aa4.06□□□□□ -1.76
Chd1-202ENSMUST00000024627 Lce1a1Q9CQH5 143 aa4.04□□□□□ -1.76
Chd1-202ENSMUST00000024627 Lce1a2Q9D1K4 149 aa4.04□□□□□ -1.76
Chd1-202ENSMUST00000024627 Lce1kJ3QP15 125 aa4.04□□□□□ -1.76
Chd1-202ENSMUST00000024627 Sprr2bO70554 98 aa4.03□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms