RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 POLA2Q14181 598 aa9.13□□□□□ -0.95
PHGDH-225ENST00000641720 CAVIN4Q5BKX8 364 aa9.13□□□□□ -0.95
PHGDH-225ENST00000641720 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
PHGDH-225ENST00000641720 SIL1Q9H173 461 aa9.13□□□□□ -0.95
PHGDH-225ENST00000641720 TTYH1Q9H313 450 aaPredicted RBP9.13□□□□□ -0.95
PHGDH-225ENST00000641720 HDAC5Q9UQL6 1122 aa9.13□□□□□ -0.95
PHGDH-225ENST00000641720 PDS5AQ29RF7 1337 aaKnown RBP9.12□□□□□ -0.95
PHGDH-225ENST00000641720 TRIM75PA6NK02 468 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 FAM196BA6NMK8 535 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 EYA2O00167 538 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 NPM3O75607 178 aaKnown RBP9.12□□□□□ -0.95
PHGDH-225ENST00000641720 PRKAR2AP13861 404 aaKnown RBP9.12□□□□□ -0.95
PHGDH-225ENST00000641720 CCND3P30281 292 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-225ENST00000641720 PHKA1P46020 1223 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 CACNB2Q08289 660 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-225ENST00000641720 MORN1Q5T089 497 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 SSH3Q8TE77 659 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 COA7Q96BR5 231 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 ASCC2Q9H1I8 757 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-225ENST00000641720 HMX1Q9NP08 348 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-225ENST00000641720 USP40Q9NVE5 1235 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 PCDHB15Q9Y5E8 787 aa9.12□□□□□ -0.95
PHGDH-225ENST00000641720 XRCC5P13010 732 aaKnown RBP9.11□□□□□ -0.95
PHGDH-225ENST00000641720 GCLCP48506 637 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-225ENST00000641720 ATP8B2P98198 1209 aa9.11□□□□□ -0.95
PHGDH-225ENST00000641720 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-225ENST00000641720 CCL14Q16627 93 aa9.11□□□□□ -0.95
PHGDH-225ENST00000641720 SHROOM1Q2M3G4 852 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-225ENST00000641720 VPS37DQ86XT2 251 aa9.11□□□□□ -0.95
PHGDH-225ENST00000641720 SMCR8Q8TEV9 937 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-225ENST00000641720 LPIN2Q92539 896 aa9.11□□□□□ -0.95
PHGDH-225ENST00000641720 CDX2Q99626 313 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-225ENST00000641720 DNAJC18Q9H819 358 aa9.11□□□□□ -0.95
PHGDH-225ENST00000641720 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
PHGDH-225ENST00000641720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-225ENST00000641720 PTPRSQ13332 1948 aa9.1□□□□□ -0.95
PHGDH-225ENST00000641720 IFIT1P09914 478 aaKnown RBP9.1□□□□□ -0.95
PHGDH-225ENST00000641720 HOXA7P31268 230 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-225ENST00000641720 HMGCS2P54868 508 aa9.1□□□□□ -0.95
PHGDH-225ENST00000641720 C9orf50Q5SZB4 431 aa9.1□□□□□ -0.95
PHGDH-225ENST00000641720 PORCNQ9H237 461 aa9.1□□□□□ -0.95
PHGDH-225ENST00000641720 CHMP4BQ9H444 224 aaKnown RBP9.1□□□□□ -0.95
PHGDH-225ENST00000641720 PICK1Q9NRD5 415 aa9.1□□□□□ -0.95
PHGDH-225ENST00000641720 FLRT1Q9NZU1 646 aa9.1□□□□□ -0.95
PHGDH-225ENST00000641720 RBPJLQ9UBG7 517 aa9.1□□□□□ -0.95
PHGDH-225ENST00000641720 BAZ2AQ9UIF9 1905 aaKnown RBP9.09□□□□□ -0.95
PHGDH-225ENST00000641720 MROH7-TTC4A0A0A0MT08 1334 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 GPR75-ASB3A0A0A6YYF3 556 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 FRAT2O75474 233 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-225ENST00000641720 CNMDO75829 334 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 CIAO1O76071 339 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 LDHBP07195 334 aaKnown RBP9.09□□□□□ -0.95
PHGDH-225ENST00000641720 ADORA1P30542 326 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 CAP2P40123 477 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 SPP2Q13103 211 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 RASGRF1Q13972 1273 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 Q3C1V9 767 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 METTL16Q86W50 562 aaKnown RBP9.09□□□□□ -0.95
PHGDH-225ENST00000641720 RPAP2Q8IXW5 612 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-225ENST00000641720 USP38Q8NB14 1042 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 ZNF280CQ8ND82 737 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 FAM161BQ96MY7 647 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 OSBPL5Q9H0X9 879 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-225ENST00000641720 SEMA6BQ9H3T3 888 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 EXOC6BQ9Y2D4 811 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 WDFY4Q6ZS81 3184 aa9.09□□□□□ -0.95
PHGDH-225ENST00000641720 GREB1LQ9C091 1923 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-225ENST00000641720 MUC6Q6W4X9 2439 aa9.09□□□□□ -0.96
PHGDH-225ENST00000641720 MYH7P12883 1935 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 SEMA3EO15041 775 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 SLC5A1P13866 664 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 CYP2B6P20813 491 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 BTDP43251 543 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 TFCP2Q12800 502 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 SNX17Q15036 470 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 TRPV1Q8NER1 839 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 MAFAQ8NHW3 353 aaPredicted RBP9.08□□□□□ -0.96
PHGDH-225ENST00000641720 P2RX7Q99572 595 aaKnown RBP9.08□□□□□ -0.96
PHGDH-225ENST00000641720 WDR18Q9BV38 432 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 RAPGEFL1Q9UHV5 662 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 NOP58Q9Y2X3 529 aaKnown RBP9.08□□□□□ -0.96
PHGDH-225ENST00000641720 LRRC37A2A6NM11 1700 aa9.08□□□□□ -0.96
PHGDH-225ENST00000641720 PRRC2BQ5JSZ5 2229 aaKnown RBP9.07□□□□□ -0.96
PHGDH-225ENST00000641720 HMMRO75330 724 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 SURF6O75683 361 aaKnown RBP9.07□□□□□ -0.96
PHGDH-225ENST00000641720 IL15P40933 162 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-225ENST00000641720 HERVK_113P62684 666 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 SHHQ15465 462 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 ATP2B3Q16720 1220 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 CCDC102BQ68D86 513 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 SOCS4Q8WXH5 440 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 MYLIPQ8WY64 445 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 FBXO3Q9UK99 471 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 DENND2AQ9ULE3 1009 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 TRIOO75962 3097 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 LCTP09848 1927 aa9.07□□□□□ -0.96
PHGDH-225ENST00000641720 APBB1O00213 710 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 ITGB8P26012 769 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 328.8 ms