RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 G3V3G9 751 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 PLEKHA8P1O95397 391 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 CHRNA5P30532 468 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 SF3A1Q15459 793 aaKnown RBP12.5□□□□□ -0.41
TARDBP-230ENST00000639083 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 ANO1Q5XXA6 986 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
TARDBP-230ENST00000639083 GOLPH3LQ9H4A5 285 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 STK32BQ9NY57 414 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-230ENST00000639083 TNS1Q9HBL0 1735 aaKnown RBP12.5□□□□□ -0.41
TARDBP-230ENST00000639083 GAKO14976 1311 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 hCG_1642624A0A1W2PR95 340 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 SPTLC2O15270 562 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 YEATS4O95619 227 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 CALM1P0DP23 149 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 CALM2P0DP24 149 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 CALM3P0DP25 149 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 PLCG2P16885 1265 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 FUT2Q10981 343 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 PPP1R9BQ96SB3 815 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 RNF26Q9BY78 433 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-230ENST00000639083 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 DAGLAQ9Y4D2 1042 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 DDAH1O94760 285 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 MMP1P03956 469 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 AKAP17AQ02040 695 aaKnown RBP12.49□□□□□ -0.41
TARDBP-230ENST00000639083 SNW1Q13573 536 aaKnown RBP12.49□□□□□ -0.41
TARDBP-230ENST00000639083 ADALQ6DHV7 355 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-230ENST00000639083 KCNG4Q8TDN1 519 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-230ENST00000639083 KCNQ5Q9NR82 932 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 RBM28Q9NW13 759 aaKnown RBP12.49□□□□□ -0.41
TARDBP-230ENST00000639083 V9GY48 417 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-230ENST00000639083 KIAA1551Q9HCM1 1747 aa12.49□□□□□ -0.41
TARDBP-230ENST00000639083 FLT1P17948 1338 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 CCDC192P0DO97 292 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 PKN1Q16512 942 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 STYK1Q6J9G0 422 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 DIS3L2Q8IYB7 885 aaKnown RBP12.48□□□□□ -0.41
TARDBP-230ENST00000639083 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
TARDBP-230ENST00000639083 ROBO3Q96MS0 1386 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 MYH15Q9Y2K3 1946 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 SAFBQ15424 915 aaKnown RBP eCLIP12.48□□□□□ -0.41
TARDBP-230ENST00000639083 CCDC73Q6ZRK6 1079 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 NOSTRINQ8IVI9 506 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 FSIP1Q8NA03 581 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 ENGASEQ8NFI3 743 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-230ENST00000639083 EYA3Q99504 573 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 SUGT1Q9Y2Z0 365 aa12.48□□□□□ -0.41
TARDBP-230ENST00000639083 COL11A2P13942 1736 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-230ENST00000639083 PRPF3O43395 683 aaKnown RBP12.47□□□□□ -0.41
TARDBP-230ENST00000639083 RASA1P20936 1047 aa12.47□□□□□ -0.41
TARDBP-230ENST00000639083 MARCKSP29966 332 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-230ENST00000639083 SCNN1DP51172 638 aa12.47□□□□□ -0.41
TARDBP-230ENST00000639083 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
TARDBP-230ENST00000639083 RBM43Q6ZSC3 357 aaKnown RBP12.47□□□□□ -0.41
TARDBP-230ENST00000639083 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
TARDBP-230ENST00000639083 DGKHQ86XP1 1220 aa12.47□□□□□ -0.41
TARDBP-230ENST00000639083 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
TARDBP-230ENST00000639083 SHISA4Q96DD7 197 aa12.47□□□□□ -0.41
TARDBP-230ENST00000639083 A0A1B0GVL5 298 aa12.46□□□□□ -0.41
TARDBP-230ENST00000639083 CDK8P49336 464 aa12.46□□□□□ -0.41
TARDBP-230ENST00000639083 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.41
TARDBP-230ENST00000639083 NR5A1Q13285 461 aa12.46□□□□□ -0.41
TARDBP-230ENST00000639083 MRPS27Q92552 414 aaKnown RBP12.46□□□□□ -0.41
TARDBP-230ENST00000639083 TRIM44Q96DX7 344 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-230ENST00000639083 KAT14Q9H8E8 782 aa12.46□□□□□ -0.41
TARDBP-230ENST00000639083 VPS54Q9P1Q0 977 aa12.46□□□□□ -0.41
TARDBP-230ENST00000639083 LAMB1P07942 1786 aa12.46□□□□□ -0.41
TARDBP-230ENST00000639083 A0A1W2PQ27 194 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 A0A1W2PQ64 194 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 A0A1W2PQD8 194 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 TYRO3Q06418 890 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 PICALMQ13492 652 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 PODNQ7Z5L7 613 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 DEFB132Q7Z7B7 95 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 PNMA1Q8ND90 353 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 OXER1Q8TDS5 423 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 MAP3K14Q99558 947 aa12.46□□□□□ -0.42
TARDBP-230ENST00000639083 FOXP1Q9H334 677 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms