RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
PAX6-243ENST00000638903 CHD4Q14839 1912 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
PAX6-243ENST00000638903 RHOXF2BP0C7M4 288 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 MCAMP43121 646 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 PDE4CQ08493 712 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 WASF1Q92558 559 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 ZBTB9Q96C00 473 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 RHOXF2Q9BQY4 288 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 SLC12A7Q9Y666 1083 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 MFAP3LO75121 409 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 A1BGP04217 495 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 GUCY1A2P33402 732 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 PBX1P40424 430 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 TAF7LQ5H9L4 462 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 SPATA1Q5VX52 437 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
PAX6-243ENST00000638903 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
PAX6-243ENST00000638903 KCNJ14Q9UNX9 436 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 FAN1Q9Y2M0 1017 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
PAX6-243ENST00000638903 TFRCP02786 760 aaKnown RBP13.21□□□□□ -0.29
PAX6-243ENST00000638903 CSB-PGBD3P0DP91 1061 aa13.21□□□□□ -0.29
PAX6-243ENST00000638903 IFNAR1P17181 557 aa13.21□□□□□ -0.29
PAX6-243ENST00000638903 LIFRP42702 1097 aa13.21□□□□□ -0.29
PAX6-243ENST00000638903 VSNL1P62760 191 aa13.21□□□□□ -0.29
PAX6-243ENST00000638903 KLHL10Q6JEL2 608 aa13.21□□□□□ -0.29
PAX6-243ENST00000638903 USP49Q70CQ1 688 aa13.21□□□□□ -0.29
PAX6-243ENST00000638903 SLC35F6Q8N357 371 aa13.21□□□□□ -0.29
PAX6-243ENST00000638903 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
PAX6-243ENST00000638903 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
PAX6-243ENST00000638903 SYNRGQ9UMZ2 1314 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 ATRNO75882 1429 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 CASP14P31944 242 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 CASP8Q14790 479 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 CNGA4Q8IV77 575 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 INCENPQ9NQS7 918 aa13.21□□□□□ -0.3
PAX6-243ENST00000638903 TTF2Q9UNY4 1162 aaKnown RBP13.21□□□□□ -0.3
PAX6-243ENST00000638903 CTAGE15A4D2H0 777 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 IFIT3O14879 490 aaKnown RBP13.2□□□□□ -0.3
PAX6-243ENST00000638903 CTAGE8P0CG41 777 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 STX17P56962 302 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 HSP90B2PQ58FF3 399 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
PAX6-243ENST00000638903 CTAGE6Q86UF2 777 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 CTAGE4Q8IX94 777 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
PAX6-243ENST00000638903 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
PAX6-243ENST00000638903 NAPGQ99747 312 aaPredicted RBP13.2□□□□□ -0.3
PAX6-243ENST00000638903 GBP3Q9H0R5 595 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
PAX6-243ENST00000638903 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 IDH1O75874 414 aaKnown RBP13.2□□□□□ -0.3
PAX6-243ENST00000638903 GYPCP04921 128 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 ATP2B1P20020 1258 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 NR5A1Q13285 461 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 WHAMMP3Q1A5X7 153 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 FILIP1LQ4L180 1135 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 CDKAL1Q5VV42 579 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 CEP131Q9UPN4 1083 aa13.2□□□□□ -0.3
PAX6-243ENST00000638903 TUBBP07437 444 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
PAX6-243ENST00000638903 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
PAX6-243ENST00000638903 CUL4BQ13620 913 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
PAX6-243ENST00000638903 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 FAM71BQ8TC56 605 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 CCDC51Q96ER9 411 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 MYH6P13533 1939 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 ZNF532Q9HCE3 1301 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 PLEKHG2Q9H7P9 1386 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 ABL1P00519 1130 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 FECHP22830 423 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
PAX6-243ENST00000638903 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
PAX6-243ENST00000638903 WDR17Q8IZU2 1322 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 PHACTR2O75167 634 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 AFMP43652 599 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 METTL24Q5JXM2 366 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
PAX6-243ENST00000638903 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 SEMA3EO15041 775 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 FOXR1Q6PIV2 292 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 NOA1Q8NC60 698 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms