RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 NAPBQ9H115 298 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.59□□□□□ -0.71
NECAP1-212ENST00000638787 SWAP70Q9UH65 585 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 MINDY4BA8MYZ0 360 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 IRF6O14896 467 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
NECAP1-212ENST00000638787 JAG1P78504 1218 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 SREBF2Q12772 1141 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
NECAP1-212ENST00000638787 CERKLQ49MI3 558 aaPredicted RBP10.59□□□□□ -0.71
NECAP1-212ENST00000638787 C16orf86Q6ZW13 317 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 WBP1LQ9NX94 342 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 ROBO3Q96MS0 1386 aa10.59□□□□□ -0.71
NECAP1-212ENST00000638787 PCNTO95613 3336 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 ASNSP08243 561 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 GTF2A2P52657 109 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 ALX1Q15699 326 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-212ENST00000638787 IL25Q9H293 177 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 ZBTB21Q9ULJ3 1066 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 RAD50Q92878 1312 aa10.58□□□□□ -0.72
NECAP1-212ENST00000638787 GH2P01242 217 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 HSPA1AP0DMV8 641 aaKnown RBP10.57□□□□□ -0.72
NECAP1-212ENST00000638787 HSPA1BP0DMV9 641 aaKnown RBP10.57□□□□□ -0.72
NECAP1-212ENST00000638787 TM4SF4P48230 202 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 CDK8P49336 464 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 SNAPC2Q13487 334 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 RUFY2Q8WXA3 655 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 BEGAINQ9BUH8 593 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 ZMYM6O95789 1325 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 PTPRFP10586 1907 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 USP17L5A8MUK1 530 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 INHBEP58166 350 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 CCL15Q16663 113 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 ABCB5Q2M3G0 1257 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 STK11IPQ8N1F8 1099 aa10.57□□□□□ -0.72
NECAP1-212ENST00000638787 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-212ENST00000638787 TRIM75PA6NK02 468 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 CXCL11O14625 94 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 FGAP02671 866 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 CETPP11597 493 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 PPARAQ07869 468 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 BRI3BPQ8WY22 251 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 TBC1D2Q9BYX2 928 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 CABP5Q9NP86 173 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 IGF2BP3O00425 579 aaKnown RBP eCLIP10.56□□□□□ -0.72
NECAP1-212ENST00000638787 MPHOSPH10O00566 681 aaKnown RBP10.56□□□□□ -0.72
NECAP1-212ENST00000638787 AKR1B1P15121 316 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 ZNF280CQ8ND82 737 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 PTPN18Q99952 460 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 DSCC1Q9BVC3 393 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 AS3MTQ9HBK9 375 aa10.56□□□□□ -0.72
NECAP1-212ENST00000638787 A0A0G2JLL6 359 aaPredicted RBP10.55□□□□□ -0.72
NECAP1-212ENST00000638787 FOXN1O15353 648 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 SGSM2O43147 1006 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 CA12O43570 354 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 SLC3A2P08195 630 aaKnown RBP10.55□□□□□ -0.72
NECAP1-212ENST00000638787 CTDSPL2Q05D32 466 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 SPP2Q13103 211 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 RAB3GAP1Q15042 981 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 PRRT2Q7Z6L0 340 aaPredicted RBP10.55□□□□□ -0.72
NECAP1-212ENST00000638787 CCDC17Q96LX7 622 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 WDR18Q9BV38 432 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 MKNK2Q9HBH9 465 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 RNF186Q9NXI6 227 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 SAGE1Q9NXZ1 904 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 ANAPC4Q9UJX5 808 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 LAMA4Q16363 1823 aa10.55□□□□□ -0.72
NECAP1-212ENST00000638787 PRDM1O75626 825 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 TRPA1O75762 1119 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 RASA1P20936 1047 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 GUCY1A2P33402 732 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 PDE4BQ07343 736 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 MOGSQ13724 837 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 SEPT2Q15019 361 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 OTUD7BQ6GQQ9 843 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 TMEM179Q6ZVK1 233 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 ZNF287Q9HBT7 754 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 BTBD19C9JJ37 291 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 CDC45O75419 566 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 GADL1Q6ZQY3 521 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
NECAP1-212ENST00000638787 LOC285556D6RIA3 1793 aa10.54□□□□□ -0.72
NECAP1-212ENST00000638787 HMGCS2P54868 508 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 HAND2P61296 217 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 MTMR2Q13614 643 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 FASTKD5Q7L8L6 764 aaKnown RBP10.53□□□□□ -0.72
NECAP1-212ENST00000638787 ESYT1Q9BSJ8 1104 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms