RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 NFXL1Q6ZNB6 911 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 DPF2Q92785 391 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 TCP11L1Q9NUJ3 509 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 HPS5Q9UPZ3 1129 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 SLC12A7Q9Y666 1083 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 SIPA1L1O43166 1804 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 ZBTB43O43298 467 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 PRDM1O75626 825 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 RASA1P20936 1047 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 CDK8P49336 464 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 METAP2P50579 478 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLN6-219ENST00000637329 EVX2Q03828 476 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 NFIAQ12857 509 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 PPP2R5BQ15173 497 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 C9orf131Q5VYM1 1079 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 STK11IPQ8N1F8 1099 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 ENAHQ8N8S7 591 aaPredicted RBP17.97■□□□□ 0.47
CLN6-219ENST00000637329 ZBED3Q96IU2 234 aaPredicted RBP17.97■□□□□ 0.47
CLN6-219ENST00000637329 FAM198AQ9UFP1 575 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 SERPINB13Q9UIV8 391 aa17.97■□□□□ 0.47
CLN6-219ENST00000637329 NAP1L2Q9ULW6 460 aaPredicted RBP17.97■□□□□ 0.47
CLN6-219ENST00000637329 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
CLN6-219ENST00000637329 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
CLN6-219ENST00000637329 CDKL5O76039 1030 aa17.96■□□□□ 0.47
CLN6-219ENST00000637329 DDAH1O94760 285 aa17.96■□□□□ 0.47
CLN6-219ENST00000637329 BRD1O95696 1058 aa17.96■□□□□ 0.47
CLN6-219ENST00000637329 SPDYE2Q495Y8 402 aa17.96■□□□□ 0.47
CLN6-219ENST00000637329 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
CLN6-219ENST00000637329 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
CLN6-219ENST00000637329 ZNF444Q8N0Y2 327 aaPredicted RBP17.96■□□□□ 0.47
CLN6-219ENST00000637329 NSUN7Q8NE18 718 aaKnown RBP17.96■□□□□ 0.47
CLN6-219ENST00000637329 DYNLL2Q96FJ2 89 aa17.96■□□□□ 0.47
CLN6-219ENST00000637329 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
CLN6-219ENST00000637329 MYH8P13535 1937 aa17.96■□□□□ 0.47
CLN6-219ENST00000637329 PTPDC1A2A3K4 754 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 GOLGA8AA7E2F4 631 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 MYO1BO43795 1136 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 CALM1P0DP23 149 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 CALM2P0DP24 149 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 CALM3P0DP25 149 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 SLC4A8Q2Y0W8 1093 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 CLEC17AQ6ZS10 378 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 DGKHQ86XP1 1220 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 ANKS1AQ92625 1134 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 PRMT6Q96LA8 375 aaPredicted RBP17.95■□□□□ 0.46
CLN6-219ENST00000637329 ZKSCAN3Q9BRR0 538 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
CLN6-219ENST00000637329 PCDHAC2Q9Y5I4 1007 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 GREB1LQ9C091 1923 aaPredicted RBP17.95■□□□□ 0.46
CLN6-219ENST00000637329 SBF1O95248 1867 aa17.95■□□□□ 0.46
CLN6-219ENST00000637329 CCDC196A0A1B0GTZ2 297 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 CPLX1O14810 134 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 MICU3Q86XE3 530 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 ZNF654Q8IZM8 581 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 RGS22Q8NE09 1264 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 GBP4Q96PP9 640 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 MYOZ2Q9NPC6 264 aa17.94■□□□□ 0.46
CLN6-219ENST00000637329 STX6O43752 255 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 CCT2P78371 535 aaKnown RBP17.93■□□□□ 0.46
CLN6-219ENST00000637329 TFAP4Q01664 338 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 FAM47AQ5JRC9 791 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 FAM83AQ86UY5 434 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 METTL16Q86W50 562 aaKnown RBP17.93■□□□□ 0.46
CLN6-219ENST00000637329 SLC44A5Q8NCS7 719 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 NEDD1Q8NHV4 660 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
CLN6-219ENST00000637329 SENP2Q9HC62 589 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 NCOA5Q9HCD5 579 aaKnown RBP17.93■□□□□ 0.46
CLN6-219ENST00000637329 PI4KBQ9UBF8 816 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 ZNF70Q9UC06 446 aaPredicted RBP17.93■□□□□ 0.46
CLN6-219ENST00000637329 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 STK36Q9NRP7 1315 aa17.93■□□□□ 0.46
CLN6-219ENST00000637329 CTDNEP1O95476 244 aa17.92■□□□□ 0.46
CLN6-219ENST00000637329 SYT1P21579 422 aa17.92■□□□□ 0.46
CLN6-219ENST00000637329 GMPSP49915 693 aaPredicted RBP17.92■□□□□ 0.46
CLN6-219ENST00000637329 CACNB3P54284 484 aa17.92■□□□□ 0.46
CLN6-219ENST00000637329 GPC2Q8N158 579 aa17.92■□□□□ 0.46
CLN6-219ENST00000637329 FAM151AQ8WW52 585 aa17.92■□□□□ 0.46
CLN6-219ENST00000637329 CCDC17Q96LX7 622 aa17.92■□□□□ 0.46
CLN6-219ENST00000637329 MAP3K14Q99558 947 aa17.92■□□□□ 0.46
CLN6-219ENST00000637329 RBM28Q9NW13 759 aaKnown RBP17.92■□□□□ 0.46
CLN6-219ENST00000637329 JAK2O60674 1132 aa17.91■□□□□ 0.46
CLN6-219ENST00000637329 NOVP48745 357 aa17.91■□□□□ 0.46
CLN6-219ENST00000637329 PKP1Q13835 747 aa17.91■□□□□ 0.46
CLN6-219ENST00000637329 RTN1Q16799 776 aa17.91■□□□□ 0.46
CLN6-219ENST00000637329 RCSD1Q6JBY9 416 aa17.91■□□□□ 0.46
CLN6-219ENST00000637329 FOXP4Q8IVH2 680 aaPredicted RBP17.91■□□□□ 0.46
CLN6-219ENST00000637329 CRACR2BQ8N4Y2 399 aaPredicted RBP17.91■□□□□ 0.46
CLN6-219ENST00000637329 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
CLN6-219ENST00000637329 HERC5Q9UII4 1024 aaKnown RBP17.91■□□□□ 0.46
CLN6-219ENST00000637329 CNTNAP1P78357 1384 aa17.91■□□□□ 0.46
CLN6-219ENST00000637329 DDTLA6NHG4 134 aaPredicted RBP17.9■□□□□ 0.46
CLN6-219ENST00000637329 WNT10BO00744 389 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 ZSCAN22P10073 491 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms