RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CST3P01034 146 aaPredicted RBP4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 CEACAM5P06731 702 aa4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 ZNF574Q6ZN55 896 aaPredicted RBP4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 ARHGAP27Q6ZUM4 889 aa4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 USP48Q86UV5 1035 aa4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 RIN3Q8TB24 985 aa4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 ZNF296Q8WUU4 475 aaPredicted RBP4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 TMEM87BQ96K49 555 aa4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 KLHL3Q9UH77 587 aa4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 SUPT16HQ9Y5B9 1047 aaKnown RBP4.15□□□□□ -1.75
SCARNA4-201ENST00000629045 PRR33A8MZF0 331 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 UPK3BL1B0FP48 263 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 UPK3BL2E5RIL1 263 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 GREM1O60565 184 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 VAMP1P23763 118 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 CAP2P40123 477 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 CD96P40200 585 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 OXCT1P55809 520 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 PDE4BQ07343 736 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 MPP2Q14168 576 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 SEZ6Q53EL9 994 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 C9orf131Q5VYM1 1079 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 LETMD1Q6P1Q0 360 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 FAM214BQ7L5A3 538 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 NBPF11Q86T75 865 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 MRPL41Q8IXM3 137 aaKnown RBP4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 FAM13CQ8NE31 585 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 BRMS1Q9HCU9 246 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 PRDM5Q9NQX1 630 aaPredicted RBP4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 KCNQ5Q9NR82 932 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 REV1Q9UBZ9 1251 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 CCDC39Q9UFE4 941 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 TPX2Q9ULW0 747 aaKnown RBP4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 PLAGL2Q9UPG8 496 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 TACC3Q9Y6A5 838 aa4.14□□□□□ -1.75
SCARNA4-201ENST00000629045 SCAMP3O14828 347 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 RACK1P63244 317 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 HDLBPQ00341 1268 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 APOBRQ0VD83 1088 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 CWF19L2Q2TBE0 894 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 DIEXFQ68CQ4 756 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 VSIG10LQ86VR7 867 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 METTL16Q86W50 562 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 WFDC3Q8IUB2 231 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 KIAA0825Q8IV33 1275 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 SPACA3Q8IXA5 215 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 MFSD2AQ8NA29 543 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 FLCNQ8NFG4 579 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 NETO1Q8TDF5 533 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 RNF34Q969K3 372 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 SPON2Q9BUD6 331 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 LRRC3Q9BY71 257 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 METTL5Q9NRN9 209 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 BSDC1Q9NW68 430 aaPredicted RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 ADAM30Q9UKF2 790 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 ANGEL1Q9UNK9 670 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 PCDHB14Q9Y5E9 798 aa4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 OAS3Q9Y6K5 1087 aaKnown RBP4.13□□□□□ -1.75
SCARNA4-201ENST00000629045 CHURC1-FNTBB4DL54 471 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 PRNPP04156 253 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 GP2P55259 537 aaKnown RBP4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 BNIP3Q12983 259 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 NKPD1Q17RQ9 610 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 TMEM201Q5SNT2 666 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 SLC6A19Q695T7 634 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 GK5Q6ZS86 529 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 CDH24Q86UP0 819 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 MCATQ8IVS2 390 aaKnown RBP4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 DNAJB8Q8NHS0 232 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 BCL7CQ8WUZ0 217 aaPredicted RBP4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 EAF1Q96JC9 268 aaPredicted RBP4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 GTF2IRD1Q9UHL9 959 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 MAPK8IP1Q9UQF2 711 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 PRR36Q9H6K5 1346 aa4.12□□□□□ -1.75
SCARNA4-201ENST00000629045 GNAT3A8MTJ3 354 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 CBX7O95931 251 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 WNT11O96014 354 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 POLR2BP30876 1174 aaKnown RBP4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 CLCQ05315 142 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 IFI16Q16666 785 aaKnown RBP4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 SFRP5Q5T4F7 317 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 OVOS1Q6IE37 1185 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 SPRED2Q7Z698 418 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 NT5DC4Q86YG4 428 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 ABI1Q8IZP0 508 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 MFSD4AQ8N468 514 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 PPP1R13LQ8WUF5 828 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 CYB5D2Q8WUJ1 264 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 ANTXR1Q9H6X2 564 aa4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 PAK6Q9NQU5 681 aaPredicted RBP4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 DDX41Q9UJV9 622 aaKnown RBP4.11□□□□□ -1.75
SCARNA4-201ENST00000629045 IGF2BP3O00425 579 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 MCM4P33991 863 aa4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 RBM25P49756 843 aaKnown RBP4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 YARSP54577 528 aaKnown RBP4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 AOC3Q16853 763 aa4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 ARSHQ5FYA8 562 aa4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 CDKAL1Q5VV42 579 aa4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 TP53INP2Q8IXH6 220 aa4.1□□□□□ -1.75
SCARNA4-201ENST00000629045 SLFN12Q8IYM2 578 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms