RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 USP5P45974 858 aa13.4□□□□□ -0.26
DDX41-219ENST00000629036 CAP1Q01518 475 aa13.4□□□□□ -0.26
DDX41-219ENST00000629036 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
DDX41-219ENST00000629036 ZMYM1Q5SVZ6 1142 aa13.4□□□□□ -0.26
DDX41-219ENST00000629036 SEC62Q99442 399 aaKnown RBP13.4□□□□□ -0.26
DDX41-219ENST00000629036 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
DDX41-219ENST00000629036 ROBO3Q96MS0 1386 aa13.4□□□□□ -0.26
DDX41-219ENST00000629036 CEP290O15078 2479 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 CYP2D7A0A087X1C5 515 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 CCL15-CCL14A0A0B4J2E2 113 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 A0A0G2JLL6 359 aaPredicted RBP13.39□□□□□ -0.27
DDX41-219ENST00000629036 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
DDX41-219ENST00000629036 GTF2A2P52657 109 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 INHBEP58166 350 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 CCL15Q16663 113 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 GPAT2Q6NUI2 795 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 PRRT2Q7Z6L0 340 aaPredicted RBP13.39□□□□□ -0.27
DDX41-219ENST00000629036 FOXP4Q8IVH2 680 aaPredicted RBP13.39□□□□□ -0.27
DDX41-219ENST00000629036 ATP8A2Q9NTI2 1148 aa13.39□□□□□ -0.27
DDX41-219ENST00000629036 TRIOBPQ9H2D6 2365 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 GPR25O00155 361 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 GPAA1O43292 621 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 GUCY1A2P33402 732 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 CRHR2Q13324 411 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 SNAPC2Q13487 334 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 SERPINB13Q9UIV8 391 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 ZBTB21Q9ULJ3 1066 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 SZT2Q5T011 3432 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 PLXNB2O15031 1838 aa13.38□□□□□ -0.27
DDX41-219ENST00000629036 CXCL11O14625 94 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 GDF11O95390 407 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 CETPP11597 493 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 GSPT1P15170 499 aaKnown RBP13.37□□□□□ -0.27
DDX41-219ENST00000629036 C12orf60Q5U649 245 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 ZCCHC17Q9NP64 241 aaKnown RBP13.37□□□□□ -0.27
DDX41-219ENST00000629036 MCM9Q9NXL9 1143 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 ZHX2Q9Y6X8 837 aa13.37□□□□□ -0.27
DDX41-219ENST00000629036 A0A0D9SFI3 127 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 FKTNO75072 461 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 HLA-DOAP06340 250 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 CCDC129Q6ZRS4 1044 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 TTC6Q86TZ1 520 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 WDR18Q9BV38 432 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 PICK1Q9NRD5 415 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 SLC4A4Q9Y6R1 1079 aa13.36□□□□□ -0.27
DDX41-219ENST00000629036 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
DDX41-219ENST00000629036 USP17L12C9JPN9 530 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 USP17L21D6R901 530 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 SBK1Q52WX2 424 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 ANKRD23Q86SG2 305 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 TICAM2Q86XR7 235 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 CRACR2BQ8N4Y2 399 aaPredicted RBP13.35□□□□□ -0.27
DDX41-219ENST00000629036 FAM227BQ96M60 508 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
DDX41-219ENST00000629036 COLQQ9Y215 455 aaPredicted RBP13.35□□□□□ -0.27
DDX41-219ENST00000629036 DLL1O00548 723 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 GH2P01242 217 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 ASNSP08243 561 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 VPS53Q5VIR6 699 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 C16orf86Q6ZW13 317 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 ZNF589Q86UQ0 364 aaPredicted RBP13.34□□□□□ -0.27
DDX41-219ENST00000629036 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 IL25Q9H293 177 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
DDX41-219ENST00000629036 TRIM75PA6NK02 468 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 POLR3DP05423 398 aaPredicted RBP13.33□□□□□ -0.28
DDX41-219ENST00000629036 SPP2Q13103 211 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
DDX41-219ENST00000629036 TREML2Q5T2D2 321 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 TTC22Q5TAA0 569 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 SKAP1Q86WV1 359 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX41-219ENST00000629036 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.28
DDX41-219ENST00000629036 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
DDX41-219ENST00000629036 TRIM17Q9Y577 477 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 TACC3Q9Y6A5 838 aa13.33□□□□□ -0.28
DDX41-219ENST00000629036 PDHXO00330 501 aa13.32□□□□□ -0.28
DDX41-219ENST00000629036 EN2P19622 333 aaPredicted RBP13.32□□□□□ -0.28
DDX41-219ENST00000629036 CDK8P49336 464 aa13.32□□□□□ -0.28
DDX41-219ENST00000629036 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
DDX41-219ENST00000629036 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
DDX41-219ENST00000629036 CLEC10AQ8IUN9 316 aa13.32□□□□□ -0.28
DDX41-219ENST00000629036 IFNL3Q8IZI9 196 aa13.32□□□□□ -0.28
DDX41-219ENST00000629036 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
DDX41-219ENST00000629036 SWAP70Q9UH65 585 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms