RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 FLAD1Q8NFF5 587 aa22.76■■□□□ 1.23
CHRNA4-209ENST00000627000 TSPY2A6NKD2 308 aa22.76■■□□□ 1.23
CHRNA4-209ENST00000627000 KCNG4Q8TDN1 519 aa22.76■■□□□ 1.23
CHRNA4-209ENST00000627000 SAP30BPQ9UHR5 308 aaKnown RBP22.76■■□□□ 1.23
CHRNA4-209ENST00000627000 MMP1P03956 469 aa22.75■■□□□ 1.23
CHRNA4-209ENST00000627000 GTF2IP78347 998 aa22.75■■□□□ 1.23
CHRNA4-209ENST00000627000 A0A1B0GVL5 298 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 hCG_1642624A0A1W2PR95 340 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 BTBD18B2RXH4 712 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 FUT2Q10981 343 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 USP25Q9UHP3 1055 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 GPR75-ASB3A0A0A6YYF3 556 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 PLCD1P51178 756 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 FAM160A1Q05DH4 1040 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 MRPS27Q92552 414 aaKnown RBP22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 SHISA4Q96DD7 197 aa22.74■■□□□ 1.23
CHRNA4-209ENST00000627000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 MARCKSP29966 332 aaPredicted RBP22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 PDE6BP35913 854 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 TFAP4Q01664 338 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 PPP2R5BQ15173 497 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 RCSD1Q6JBY9 416 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 DIS3L2Q8IYB7 885 aaKnown RBP22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 MPNDQ8N594 471 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 SLC44A5Q8NCS7 719 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 RNF26Q9BY78 433 aaPredicted RBP22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 FAM205AQ6ZU69 1335 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 A0A1W2PQ27 194 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 A0A1W2PQ64 194 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 A0A1W2PQD8 194 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 DDAH1O94760 285 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 SLC39A14Q15043 492 aa22.73■■□□□ 1.23
CHRNA4-209ENST00000627000 WDHD1O75717 1129 aaPredicted RBP22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 ALDH1B1P30837 517 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 PKN1Q16512 942 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 AXDND1Q5T1B0 1012 aaPredicted RBP22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 TEX11Q8IYF3 940 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 TBC1D22AQ8WUA7 517 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 FBXW7Q969H0 707 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 ROBO3Q96MS0 1386 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 MAP3K14Q99558 947 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 IL17RBQ9NRM6 502 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 ESPNB1AK53 854 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 NDUFA8P51970 172 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 RHBDL3P58872 404 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 PTPAQ15257 358 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 ANO6Q4KMQ2 910 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 FMR1NBQ8N0W7 255 aaPredicted RBP22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 MASTLQ96GX5 879 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 COA1Q9GZY4 146 aa22.72■■□□□ 1.23
CHRNA4-209ENST00000627000 KINO60870 393 aaKnown RBP22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 CALM1P0DP23 149 aa22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 CALM2P0DP24 149 aa22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 CALM3P0DP25 149 aa22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 NR5A1Q13285 461 aa22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 DOK7Q18PE1 504 aa22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 DPP8Q6V1X1 898 aaPredicted RBP22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 NOSTRINQ8IVI9 506 aa22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 ZNF622Q969S3 477 aaKnown RBP eCLIP22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 ZC3H12CQ9C0D7 883 aaKnown RBP22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 RBM28Q9NW13 759 aaKnown RBP22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 RGS17Q9UGC6 210 aaPredicted RBP22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 V9GY48 417 aaPredicted RBP22.71■■□□□ 1.23
CHRNA4-209ENST00000627000 SAFBQ15424 915 aaKnown RBP eCLIP22.7■■□□□ 1.23
CHRNA4-209ENST00000627000 SASS6Q6UVJ0 657 aa22.7■■□□□ 1.23
CHRNA4-209ENST00000627000 OXER1Q8TDS5 423 aa22.7■■□□□ 1.23
CHRNA4-209ENST00000627000 MXD3Q9BW11 206 aa22.7■■□□□ 1.23
CHRNA4-209ENST00000627000 MKNK2Q9HBH9 465 aa22.7■■□□□ 1.23
CHRNA4-209ENST00000627000 VPS54Q9P1Q0 977 aa22.7■■□□□ 1.23
CHRNA4-209ENST00000627000 GAKO14976 1311 aa22.7■■□□□ 1.22
CHRNA4-209ENST00000627000 AKAP17AQ02040 695 aaKnown RBP22.7■■□□□ 1.22
CHRNA4-209ENST00000627000 TMTC3Q6ZXV5 915 aa22.7■■□□□ 1.22
CHRNA4-209ENST00000627000 AMOTL1Q8IY63 956 aa22.7■■□□□ 1.22
CHRNA4-209ENST00000627000 CERS5Q8N5B7 392 aa22.7■■□□□ 1.22
CHRNA4-209ENST00000627000 FAM200AQ8TCP9 573 aa22.7■■□□□ 1.22
CHRNA4-209ENST00000627000 FAM163AQ96GL9 167 aaPredicted RBP22.7■■□□□ 1.22
CHRNA4-209ENST00000627000 USP17L3A6NCW0 530 aa22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 USP17L4A6NCW7 530 aa22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 F8W031 263 aaPredicted RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 AP5Z1O43299 807 aa22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 PRPF3O43395 683 aaKnown RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 USP17L1Q7RTZ2 530 aa22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 SRBD1Q8N5C6 995 aaKnown RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 DDX60LQ5H9U9 1706 aaKnown RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 FLT1P17948 1338 aa22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 BAZ2BQ9UIF8 2168 aaKnown RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 TOB1P50616 345 aaPredicted RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 POTEAQ6S8J7 498 aa22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 CTCFLQ8NI51 663 aaPredicted RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 ERCC4Q92889 916 aaPredicted RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 DAGLAQ9Y4D2 1042 aa22.69■■□□□ 1.22
CHRNA4-209ENST00000627000 CNTNAP5Q8WYK1 1306 aa22.68■■□□□ 1.22
CHRNA4-209ENST00000627000 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
CHRNA4-209ENST00000627000 LUZP1Q86V48 1076 aa22.68■■□□□ 1.22
CHRNA4-209ENST00000627000 FOXP1Q9H334 677 aaPredicted RBP22.68■■□□□ 1.22
CHRNA4-209ENST00000627000 MYH1P12882 1939 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 CTAGE5O15320 804 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 ADCY5O95622 1261 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 C2CD5Q86YS7 1000 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms