RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 SLAMF8Q9P0V8 285 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 NDUFB5O43674 189 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 ICMTO60725 284 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 HPXP02790 462 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 ZNF746Q6NUN9 644 aaPredicted RBP6.25□□□□□ -1.41
VBP1-204ENST00000625964 ZNF507Q8TCN5 953 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 COX4I2Q96KJ9 171 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 TPX2Q9ULW0 747 aaKnown RBP6.25□□□□□ -1.41
VBP1-204ENST00000625964 CAPN6Q9Y6Q1 641 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 EIF1AYO14602 144 aaKnown RBP6.24□□□□□ -1.41
VBP1-204ENST00000625964 FCGRTP55899 365 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 TMPRSS7Q7RTY8 843 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 IRF2BP1Q8IU81 584 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 CXorf38Q8TB03 319 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 TRAIPQ9BWF2 469 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 RTEL1Q9NZ71 1219 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 TMEM59LQ9UK28 342 aa6.24□□□□□ -1.41
VBP1-204ENST00000625964 PRR33A8MZF0 331 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 PEX10O60683 326 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 SEMA7AO75326 666 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 TRIM37O94972 964 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 SLITRK5O94991 958 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 PDIA4P13667 645 aaKnown RBP6.23□□□□□ -1.41
VBP1-204ENST00000625964 TCERG1LQ5VWI1 586 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 UBE3DQ7Z6J8 389 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 TMEM151BQ8IW70 566 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 MARCH10Q8NA82 808 aaPredicted RBP6.23□□□□□ -1.41
VBP1-204ENST00000625964 SAMM50Q9Y512 469 aa6.23□□□□□ -1.41
VBP1-204ENST00000625964 DLG4P78352 724 aa6.22□□□□□ -1.41
VBP1-204ENST00000625964 FGD1P98174 961 aa6.22□□□□□ -1.41
VBP1-204ENST00000625964 ZNF385BQ569K4 471 aa6.22□□□□□ -1.41
VBP1-204ENST00000625964 MFSD2AQ8NA29 543 aa6.22□□□□□ -1.41
VBP1-204ENST00000625964 UBE2FQ969M7 185 aa6.22□□□□□ -1.41
VBP1-204ENST00000625964 CBX8Q9HC52 389 aa6.22□□□□□ -1.41
VBP1-204ENST00000625964 CSADQ9Y600 493 aa6.22□□□□□ -1.41
VBP1-204ENST00000625964 DCDC2CA8MYV0 355 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 CAP2P40123 477 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 KIR3DL1P43629 444 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 KCNA1Q09470 495 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 ERICH6BQ5W0A0 696 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 C12orf40Q86WS4 652 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 LILRA2Q8N149 483 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 SLC6A17Q9H1V8 727 aa6.21□□□□□ -1.42
VBP1-204ENST00000625964 GNEQ9Y223 722 aaKnown RBP6.21□□□□□ -1.42
VBP1-204ENST00000625964 DNAJC25-GNG10A0A024R161 153 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 MCOLN1Q9GZU1 580 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 ZSWIM5Q9P217 1185 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 BIN2Q9UBW5 565 aaPredicted RBP6.2□□□□□ -1.42
VBP1-204ENST00000625964 CNOT6Q9ULM6 557 aaKnown RBP6.2□□□□□ -1.42
VBP1-204ENST00000625964 IVNS1ABPQ9Y6Y0 642 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 SOWAHDA6NJG2 315 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 RFXAPO00287 272 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 PSPNO60542 156 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 CYP7A1P22680 504 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 HK2P52789 917 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 ERVFC1P60507 584 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 RALGPS1Q5JS13 557 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 NLRP2Q9NX02 1062 aa6.2□□□□□ -1.42
VBP1-204ENST00000625964 CNTNAP4Q9C0A0 1308 aa6.19□□□□□ -1.42
VBP1-204ENST00000625964 ARHGAP4P98171 946 aa6.19□□□□□ -1.42
VBP1-204ENST00000625964 PRRT2Q7Z6L0 340 aaPredicted RBP6.19□□□□□ -1.42
VBP1-204ENST00000625964 PIWIL2Q8TC59 973 aaKnown RBP6.19□□□□□ -1.42
VBP1-204ENST00000625964 EPS8L3Q8TE67 593 aaKnown RBP6.19□□□□□ -1.42
VBP1-204ENST00000625964 MIPEPQ99797 713 aa6.19□□□□□ -1.42
VBP1-204ENST00000625964 AKAP2Q9Y2D5 859 aa6.19□□□□□ -1.42
VBP1-204ENST00000625964 TEX51A0A1B0GUA7 166 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 ESR1P03372 595 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 BMP6P22004 513 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 LRRC14Q15048 493 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 AEBP1Q8IUX7 1158 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 PDZD8Q8NEN9 1154 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 ELMO3Q96BJ8 720 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 NECAB3Q96P71 396 aaPredicted RBP6.18□□□□□ -1.42
VBP1-204ENST00000625964 NIF3L1Q9GZT8 377 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 RNF32Q9H0A6 362 aa6.18□□□□□ -1.42
VBP1-204ENST00000625964 PATL2C9JE40 543 aaKnown RBP6.17□□□□□ -1.42
VBP1-204ENST00000625964 SASH1O94885 1247 aa6.17□□□□□ -1.42
VBP1-204ENST00000625964 MPRIPQ6WCQ1 1025 aa6.17□□□□□ -1.42
VBP1-204ENST00000625964 ALKBH8Q96BT7 664 aaKnown RBP6.17□□□□□ -1.42
VBP1-204ENST00000625964 CWC22Q9HCG8 908 aaKnown RBP6.17□□□□□ -1.42
VBP1-204ENST00000625964 PCDHA4Q9UN74 947 aa6.17□□□□□ -1.42
VBP1-204ENST00000625964 KCTD3Q9Y597 815 aa6.17□□□□□ -1.42
VBP1-204ENST00000625964 CBX7O95931 251 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 ADRB1P08588 477 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 SLBPQ14493 270 aaKnown RBP eCLIP6.16□□□□□ -1.42
VBP1-204ENST00000625964 SKOR2Q2VWA4 1001 aaPredicted RBP6.16□□□□□ -1.42
VBP1-204ENST00000625964 TMEM132EQ6IEE7 984 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 LETMD1Q6P1Q0 360 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 GGNQ86UU5 652 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 OXR1Q8N573 874 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 TMC1Q8TDI8 760 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 DMRTB1Q96MA1 342 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 BCO2Q9BYV7 579 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 CEP44Q9C0F1 390 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 ADAMTS10Q9H324 1103 aa6.16□□□□□ -1.42
VBP1-204ENST00000625964 ZNF552Q9H707 407 aaPredicted RBP6.16□□□□□ -1.42
VBP1-204ENST00000625964 MYOCOSA0A1B0GUC4 107 aa6.15□□□□□ -1.42
VBP1-204ENST00000625964 TRIM13O60858 407 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms