RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 FAM196BA6NMK8 535 aa11.48□□□□□ -0.57
LINC01560-202ENST00000624822 POLR3DP05423 398 aaPredicted RBP11.48□□□□□ -0.57
LINC01560-202ENST00000624822 SLC10A3P09131 477 aa11.48□□□□□ -0.57
LINC01560-202ENST00000624822 MAP3K9P80192 1104 aa11.48□□□□□ -0.57
LINC01560-202ENST00000624822 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
LINC01560-202ENST00000624822 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
LINC01560-202ENST00000624822 ZKSCAN4Q969J2 545 aaPredicted RBP11.48□□□□□ -0.57
LINC01560-202ENST00000624822 OSBP2Q969R2 916 aa11.48□□□□□ -0.57
LINC01560-202ENST00000624822 SEC62Q99442 399 aaKnown RBP11.48□□□□□ -0.57
LINC01560-202ENST00000624822 PHIPQ8WWQ0 1821 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 M0R2C6 588 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 GPAA1O43292 621 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 PRKAB2O43741 272 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
LINC01560-202ENST00000624822 APPP05067 770 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 INPP5BP32019 993 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 NOGQ13253 232 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 VGLL4Q14135 290 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 LDLRAD1Q5T700 205 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 TTC22Q5TAA0 569 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.47□□□□□ -0.57
LINC01560-202ENST00000624822 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 DCP1AQ9NPI6 582 aaPredicted RBP11.47□□□□□ -0.57
LINC01560-202ENST00000624822 MCM9Q9NXL9 1143 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 PPP4R2Q9NY27 417 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 PI4KBQ9UBF8 816 aa11.47□□□□□ -0.57
LINC01560-202ENST00000624822 UNCXA6NJT0 531 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 FAM155AB1AL88 458 aaPredicted RBP11.46□□□□□ -0.57
LINC01560-202ENST00000624822 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
LINC01560-202ENST00000624822 ZMYM1Q5SVZ6 1142 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 OPTNQ96CV9 577 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 MFRPQ9BY79 579 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 DIAPH3Q9NSV4 1193 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 ATP8A2Q9NTI2 1148 aa11.46□□□□□ -0.57
LINC01560-202ENST00000624822 HERC5Q9UII4 1024 aaKnown RBP11.46□□□□□ -0.57
LINC01560-202ENST00000624822 PTPRFP10586 1907 aa11.46□□□□□ -0.58
LINC01560-202ENST00000624822 STK25O00506 426 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 GNAT2P19087 354 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 MAP2K2P36507 400 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 TDO2P48775 406 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 KIF23Q02241 960 aaPredicted RBP11.45□□□□□ -0.58
LINC01560-202ENST00000624822 NMIQ13287 307 aaPredicted RBP11.45□□□□□ -0.58
LINC01560-202ENST00000624822 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 CCDC129Q6ZRS4 1044 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
LINC01560-202ENST00000624822 WNK4Q96J92 1243 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 STRBPQ96SI9 672 aaKnown RBP11.45□□□□□ -0.58
LINC01560-202ENST00000624822 SNCAIPQ9Y6H5 919 aa11.45□□□□□ -0.58
LINC01560-202ENST00000624822 A0A0D9SFI3 127 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 HIP1O00291 1037 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 TBC1D12O60347 775 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 ZBTB48P10074 688 aaPredicted RBP11.44□□□□□ -0.58
LINC01560-202ENST00000624822 GSPT1P15170 499 aaKnown RBP11.44□□□□□ -0.58
LINC01560-202ENST00000624822 SDSP20132 328 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 PLCD1P51178 756 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 MAP2K1Q02750 393 aaPredicted RBP11.44□□□□□ -0.58
LINC01560-202ENST00000624822 SPRYD7Q5W111 196 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 CWC27Q6UX04 472 aaKnown RBP11.44□□□□□ -0.58
LINC01560-202ENST00000624822 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 ERO1BQ86YB8 467 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 FAM227BQ96M60 508 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 ZIC5Q96T25 663 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 PICK1Q9NRD5 415 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 HELLSQ9NRZ9 838 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 ZNF112Q9UJU3 913 aa11.44□□□□□ -0.58
LINC01560-202ENST00000624822 SPDYE5A6NIY4 337 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 PHF20L1A8MW92 1017 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 USP17L21D6R901 530 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 CTNND1O60716 968 aaKnown RBP11.43□□□□□ -0.58
LINC01560-202ENST00000624822 GDF11O95390 407 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 CYP2D6P10635 497 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 MAP3K10Q02779 954 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 SREBF2Q12772 1141 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 MCMDC2Q4G0Z9 681 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 NOL9Q5SY16 702 aaKnown RBP11.43□□□□□ -0.58
LINC01560-202ENST00000624822 SCYL3Q8IZE3 742 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 STK11IPQ8N1F8 1099 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 NACAP1Q9BZK3 213 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 NAPBQ9H115 298 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 EHD4Q9H223 541 aa11.43□□□□□ -0.58
LINC01560-202ENST00000624822 ARPP21Q9UBL0 812 aaPredicted RBP11.43□□□□□ -0.58
LINC01560-202ENST00000624822 CEP350Q5VT06 3117 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 LAMA4Q16363 1823 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 CYP2D7A0A087X1C5 515 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 MANSC4A6NHS7 340 aaPredicted RBP11.42□□□□□ -0.58
LINC01560-202ENST00000624822 GSG1L2A8MUP6 293 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 MINDY4BA8MYZ0 360 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 PATL2C9JE40 543 aaKnown RBP11.42□□□□□ -0.58
LINC01560-202ENST00000624822 HSPA1AP0DMV8 641 aaKnown RBP11.42□□□□□ -0.58
LINC01560-202ENST00000624822 HSPA1BP0DMV9 641 aaKnown RBP11.42□□□□□ -0.58
LINC01560-202ENST00000624822 GJA5P36382 358 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 CAP2P40123 477 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
LINC01560-202ENST00000624822 CTR9Q6PD62 1173 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms