RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	SYN1	P17600	705 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	HOXA7	P31268	230 aa	Predicted RBP	18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	BMP8B	P34820	402 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	GPRC5A	Q8NFJ5	357 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	TGFBRAP1	Q8WUH2	860 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	TRIM34	Q9BYJ4	488 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	TXNRD2	Q9NNW7	524 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	TNN	Q9UQP3	1299 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	GDF11	O95390	407 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	PRKAR2A	P13861	404 aa	Known RBP	18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	TRIM27	P14373	513 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	HERVK_113	P62684	666 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	TTC39A	Q5SRH9	613 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	MAP3K21	Q5TCX8	1036 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	ADGRA1	Q86SQ6	560 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	SOCS4	Q8WXH5	440 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	NUDT12	Q9BQG2	462 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	OGDHL	Q9ULD0	1010 aa		18.81	■□□□□ 0.6
ATRX-215	ENST00000624193	C19orf81	C9J6K1	198 aa		18.8	■□□□□ 0.6
ATRX-215	ENST00000624193	PALD1	Q9ULE6	856 aa		18.8	■□□□□ 0.6
ATRX-215	ENST00000624193	ZBTB21	Q9ULJ3	1066 aa		18.8	■□□□□ 0.6
ATRX-215	ENST00000624193	USP17L10	C9JJH3	530 aa		18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	DLL1	O00548	723 aa		18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	IPO8	O15397	1037 aa	Known RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	XRCC5	P13010	732 aa	Known RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	ZKSCAN1	P17029	563 aa	Predicted RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	MAGEA10	P43363	369 aa	Predicted RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	PPP4C	P60510	307 aa		18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	PDE3A	Q14432	1141 aa		18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	METTL16	Q86W50	562 aa	Known RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	FRAT1	Q92837	279 aa	Predicted RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	RBPJL	Q9UBG7	517 aa		18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	SAP30BP	Q9UHR5	308 aa	Known RBP	18.79	■□□□□ 0.6
ATRX-215	ENST00000624193	PFAS	O15067	1338 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	CYP2E1	P05181	493 aa	Predicted RBP	18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	MAPK4	P31152	587 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	TNNI3K	Q59H18	835 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	CCDC158	Q5M9N0	1113 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	ATF7IP	Q6VMQ6	1270 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	CCAR1	Q8IX12	1150 aa	Known RBP	18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	CLUAP1	Q96AJ1	413 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	DBNDD2	Q9BQY9	259 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	PAGR1	Q9BTK6	254 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	PORCN	Q9H237	461 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	FPGT-TNNI3K	V9GXZ4	949 aa		18.78	■□□□□ 0.6
ATRX-215	ENST00000624193	FRMPD3	Q5JV73	1810 aa		18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	MYH1	P12882	1939 aa		18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	ERVK-9	P63128	1117 aa		18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	ERVK-24	P63145	666 aa		18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	CACNB2	Q08289	660 aa	Predicted RBP	18.77	■□□□□ 0.6
ATRX-215	ENST00000624193		Q3C1V9	767 aa		18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	TRMT44	Q8IYL2	757 aa	Known RBP	18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	GPR108	Q9NPR9	543 aa		18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	GINM1	Q9NU53	330 aa		18.77	■□□□□ 0.6
ATRX-215	ENST00000624193	HLA-DOA	P06340	250 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	RGS2	P41220	211 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	OS9	Q13438	667 aa	Predicted RBP	18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	CCL14	Q16627	93 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	GPR153	Q6NV75	609 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	GPR142	Q7Z601	462 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	TDH	Q8IZJ6	230 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	USP6NL	Q92738	828 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	EMILIN3	Q9NT22	766 aa		18.76	■□□□□ 0.59
ATRX-215	ENST00000624193	BCAR3	O75815	825 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	CCND3	P30281	292 aa	Predicted RBP	18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	ZAP70	P43403	619 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	DYNLL1	P63167	89 aa	Known RBP	18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	POLA2	Q14181	598 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	LRIT3	Q3SXY7	679 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	MORN1	Q5T089	497 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	USP17L2	Q6R6M4	530 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	POTEE	Q6S8J3	1075 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193		Q7L0L9	218 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	PLEKHH3	Q7Z736	793 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	DEFB123	Q8N688	67 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	APBA2	Q99767	749 aa		18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	UBE2O	Q9C0C9	1292 aa	Known RBP	18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	PIH1D3	Q9NQM4	214 aa	Known RBP	18.75	■□□□□ 0.59
ATRX-215	ENST00000624193	LAMA3	Q16787	3333 aa		18.74	■□□□□ 0.59
ATRX-215	ENST00000624193	GH2	P01242	217 aa		18.74	■□□□□ 0.59
ATRX-215	ENST00000624193	COL6A1	P12109	1028 aa		18.74	■□□□□ 0.59
ATRX-215	ENST00000624193	ZYX	Q15942	572 aa	Known RBP	18.74	■□□□□ 0.59
ATRX-215	ENST00000624193	TMEM57	Q8N5G2	664 aa		18.74	■□□□□ 0.59
ATRX-215	ENST00000624193	FEZ1	Q99689	392 aa		18.74	■□□□□ 0.59
ATRX-215	ENST00000624193	CWC22	Q9HCG8	908 aa	Known RBP	18.74	■□□□□ 0.59
ATRX-215	ENST00000624193	CYP7A1	P22680	504 aa		18.73	■□□□□ 0.59
ATRX-215	ENST00000624193	LHX8	Q68G74	356 aa		18.73	■□□□□ 0.59
ATRX-215	ENST00000624193	SSH3	Q8TE77	659 aa		18.73	■□□□□ 0.59
ATRX-215	ENST00000624193	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.73	■□□□□ 0.59
ATRX-215	ENST00000624193	IGSF3	O75054	1194 aa		18.72	■□□□□ 0.59
ATRX-215	ENST00000624193	SURF6	O75683	361 aa	Known RBP	18.72	■□□□□ 0.59
ATRX-215	ENST00000624193	LRRC26	Q2I0M4	334 aa		18.72	■□□□□ 0.59
ATRX-215	ENST00000624193	MIGA1	Q8NAN2	632 aa		18.72	■□□□□ 0.59
ATRX-215	ENST00000624193	C12orf42	Q96LP6	360 aa		18.72	■□□□□ 0.59
ATRX-215	ENST00000624193	TLR7	Q9NYK1	1049 aa	Known RBP	18.72	■□□□□ 0.59
ATRX-215	ENST00000624193	DBNL	Q9UJU6	430 aa	Known RBP	18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms