RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-215ENST00000624145 MYCLP12524 364 aaPredicted RBP4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 ATF7P17544 494 aaPredicted RBP4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 POLR2BP30876 1174 aaKnown RBP4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 IL15P40933 162 aaPredicted RBP4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 STX1BP61266 288 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 KLHL7Q8IXQ5 586 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 ANKRD42Q8N9B4 389 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 MGARPQ8TDB4 240 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 FAM193BQ96PV7 902 aaPredicted RBP4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 CSRNP1Q96S65 589 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 RAB20Q9NX57 234 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 KCNG1Q9UIX4 513 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 SLC13A4Q9UKG4 626 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 BZW2Q9Y6E2 419 aaKnown RBP4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 GJA3Q9Y6H8 435 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 TTC21BQ7Z4L5 1316 aa4.46□□□□□ -1.69
ANKRD28-215ENST00000624145 NVLO15381 856 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 HIP1RO75146 1068 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 STAM2O75886 525 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 LUC7L3O95232 432 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 GCKP35557 465 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 IQCB1Q15051 598 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 TRIM68Q6AZZ1 485 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ANKRD13DQ6ZTN6 518 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 FCHSD1Q86WN1 690 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 CCDC13Q8IYE1 715 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 FNBP4Q8N3X1 1017 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 IGSF22Q8N9C0 903 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PRPF38AQ8NAV1 312 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 CFAP61Q8NHU2 1237 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RNF217Q8TC41 542 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 TACO1Q9BSH4 297 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RABEP2Q9H5N1 569 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 SLC5A4Q9NY91 659 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 SUCLA2Q9P2R7 463 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 TPX2Q9ULW0 747 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PHF8Q9UPP1 1060 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 UNC13AQ9UPW8 1703 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ZNF644Q9H582 1327 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 GSTA4O15217 222 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ZBED4O75132 1171 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 VPS41P49754 854 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RARSP54136 660 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ASPHQ12797 758 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PRPSAP1Q14558 356 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 HP1BP3Q5SSJ5 553 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 NCAPH2Q6IBW4 605 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 MICAL1Q8TDZ2 1067 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ERO1AQ96HE7 468 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 TRIM4Q9C037 500 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PAG1Q9NWQ8 432 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 CCPG1Q9ULG6 757 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 NIP7Q9Y221 180 aaKnown RBP eCLIP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RIMBP2O15034 1052 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RGS16O15492 202 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PFDN1O60925 122 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 KRT10P13645 584 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 GNL1P36915 607 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ECE1P42892 770 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 TCIRG1Q13488 830 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PPP2R5AQ15172 486 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 HADHQ16836 314 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 KRT71Q3SY84 523 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 CFAP221Q4G0U5 840 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ACBD5Q5T8D3 534 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 FAM186BQ8IYM0 893 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 BBS5Q8N3I7 341 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 AFAP1Q8N556 730 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 MAGEB6Q8N7X4 407 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RHPN1Q8TCX5 695 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 STAG1Q8WVM7 1258 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 CCDC138Q96M89 665 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 FGD4Q96M96 766 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 KRT82Q9NSB4 513 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 EPS15L1Q9UBC2 864 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 MYO1AQ9UBC5 1043 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ZRANB1Q9UGI0 708 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 TPCN1Q9ULQ1 816 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 ZKSCAN5Q9Y2L8 839 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 SYNRGQ9UMZ2 1314 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 KIF21BO75037 1637 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PPP1R12AO14974 1030 aaPredicted RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 SART1O43290 800 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 CCNT1O60563 726 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 EXOC3O60645 756 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 GPC4O75487 556 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 HEXIM1O94992 359 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 FBXW4P57775 412 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 NUCB1Q02818 461 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RPS6KA1Q15418 735 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PEX26Q7Z412 305 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RBM17Q96I25 401 aaKnown RBP4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 MIS12Q9H081 205 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 GPCPD1Q9NPB8 672 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 SFMBT1Q9UHJ3 866 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 RAD50Q92878 1312 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 CCDC141Q6ZP82 1450 aa4.46□□□□□ -1.7
ANKRD28-215ENST00000624145 PI4KAP2A4QPH2 592 aa4.45□□□□□ -1.7
ANKRD28-215ENST00000624145 NPR1P16066 1061 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms