RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 GAL3ST3Q96A11 431 aa8.2□□□□□ -1.1
AC004943.3-201ENST00000624116 SETDB2Q96T68 719 aa8.2□□□□□ -1.1
AC004943.3-201ENST00000624116 EIF4BP23588 611 aaKnown RBP8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 KRTAP19-4Q3LI73 84 aa8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 WIPI1Q5MNZ9 446 aaPredicted RBP8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 LETMD1Q6P1Q0 360 aa8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 KIRREL1Q96J84 757 aa8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 HSPA12BQ96MM6 686 aa8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 CARS2Q9HA77 564 aaKnown RBP8.19□□□□□ -1.1
AC004943.3-201ENST00000624116 ZNF503-AS2A6NEH8 195 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 GLI1P08151 1106 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 GNA15P30679 374 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 GDNFP39905 211 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 KIR3DL1P43629 444 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 MESP2Q0VG99 397 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 MLANAQ16655 118 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 CDKAL1Q5VV42 579 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 FBRSQ9HAH7 460 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 SEMA3GQ9NS98 782 aa8.18□□□□□ -1.1
AC004943.3-201ENST00000624116 P4HBP07237 508 aaKnown RBP8.17□□□□□ -1.1
AC004943.3-201ENST00000624116 CCDC85BQ15834 202 aaPredicted RBP8.17□□□□□ -1.1
AC004943.3-201ENST00000624116 MPZL3Q6UWV2 235 aa8.17□□□□□ -1.1
AC004943.3-201ENST00000624116 ATP13A1Q9HD20 1204 aa8.17□□□□□ -1.1
AC004943.3-201ENST00000624116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.17□□□□□ -1.1
AC004943.3-201ENST00000624116 CAPN6Q9Y6Q1 641 aa8.17□□□□□ -1.1
AC004943.3-201ENST00000624116 CST3P01034 146 aaPredicted RBP8.16□□□□□ -1.1
AC004943.3-201ENST00000624116 PTPN11Q06124 597 aaPredicted RBP8.16□□□□□ -1.1
AC004943.3-201ENST00000624116 NKG7Q16617 165 aa8.16□□□□□ -1.1
AC004943.3-201ENST00000624116 TMEM67Q5HYA8 995 aa8.16□□□□□ -1.1
AC004943.3-201ENST00000624116 PRAMEF13Q5VWM6 474 aa8.16□□□□□ -1.1
AC004943.3-201ENST00000624116 TOX2Q96NM4 488 aa8.16□□□□□ -1.1
AC004943.3-201ENST00000624116 PRR33A8MZF0 331 aa8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 H3BS24 57 aa8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 PRPF40AO75400 957 aaKnown RBP8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 TSPAN15O95858 294 aa8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 GRK4P32298 578 aa8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 RAP1GAPP47736 663 aa8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 ST14Q9Y5Y6 855 aa8.15□□□□□ -1.1
AC004943.3-201ENST00000624116 RLBP1P12271 317 aa8.14□□□□□ -1.11
AC004943.3-201ENST00000624116 RAC2P15153 192 aa8.14□□□□□ -1.11
AC004943.3-201ENST00000624116 ETV3P41162 512 aa8.14□□□□□ -1.11
AC004943.3-201ENST00000624116 PDE4BQ07343 736 aa8.14□□□□□ -1.11
AC004943.3-201ENST00000624116 PIWIL2Q8TC59 973 aaKnown RBP8.14□□□□□ -1.11
AC004943.3-201ENST00000624116 LIN37Q96GY3 246 aaPredicted RBP8.14□□□□□ -1.11
AC004943.3-201ENST00000624116 ALPK1Q96QP1 1244 aa8.14□□□□□ -1.11
AC004943.3-201ENST00000624116 CBX7O95931 251 aa8.13□□□□□ -1.11
AC004943.3-201ENST00000624116 FBLN7Q53RD9 439 aa8.13□□□□□ -1.11
AC004943.3-201ENST00000624116 TMPRSS7Q7RTY8 843 aa8.13□□□□□ -1.11
AC004943.3-201ENST00000624116 MRPL41Q8IXM3 137 aaKnown RBP8.13□□□□□ -1.11
AC004943.3-201ENST00000624116 MIR1-1HGQ9H1L0 117 aa8.13□□□□□ -1.11
AC004943.3-201ENST00000624116 AK5Q9Y6K8 562 aa8.13□□□□□ -1.11
AC004943.3-201ENST00000624116 FYB2Q5VWT5 728 aa8.12□□□□□ -1.11
AC004943.3-201ENST00000624116 AGMOQ6ZNB7 445 aa8.12□□□□□ -1.11
AC004943.3-201ENST00000624116 UBE2FQ969M7 185 aa8.12□□□□□ -1.11
AC004943.3-201ENST00000624116 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 GFRA2O00451 464 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 PGRP06401 933 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 SEPT6Q14141 434 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 SLC6A19Q695T7 634 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 SPOCD1Q6ZMY3 1216 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 ZSCAN18Q8TBC5 510 aaPredicted RBP8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 C19orf73Q9NVV2 129 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 ZSWIM5Q9P217 1185 aa8.11□□□□□ -1.11
AC004943.3-201ENST00000624116 LIG3P49916 1009 aa8.1□□□□□ -1.11
AC004943.3-201ENST00000624116 TSNAXIP1Q2TAA8 658 aa8.1□□□□□ -1.11
AC004943.3-201ENST00000624116 ANKLE2Q86XL3 938 aa8.1□□□□□ -1.11
AC004943.3-201ENST00000624116 FBXO15Q8NCQ5 510 aaPredicted RBP8.1□□□□□ -1.11
AC004943.3-201ENST00000624116 RIN3Q8TB24 985 aa8.1□□□□□ -1.11
AC004943.3-201ENST00000624116 KRTAP4-7Q9BYR0 210 aa8.1□□□□□ -1.11
AC004943.3-201ENST00000624116 TRIT1Q9H3H1 467 aaKnown RBP8.1□□□□□ -1.11
AC004943.3-201ENST00000624116 CNTNAP4Q9C0A0 1308 aa8.09□□□□□ -1.11
AC004943.3-201ENST00000624116 TNK2Q07912 1038 aa8.09□□□□□ -1.11
AC004943.3-201ENST00000624116 SYDE1Q6ZW31 735 aaPredicted RBP8.09□□□□□ -1.11
AC004943.3-201ENST00000624116 TMEM87BQ96K49 555 aa8.09□□□□□ -1.11
AC004943.3-201ENST00000624116 SLAMF8Q9P0V8 285 aa8.09□□□□□ -1.11
AC004943.3-201ENST00000624116 ADAM30Q9UKF2 790 aa8.09□□□□□ -1.11
AC004943.3-201ENST00000624116 NFIBO00712 420 aa8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 CDK8P49336 464 aa8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 RPL6Q02878 288 aaKnown RBP8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 PRR23BQ6ZRT6 265 aa8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 CDH24Q86UP0 819 aa8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 PCDHB5Q9Y5E4 795 aa8.08□□□□□ -1.12
AC004943.3-201ENST00000624116 EAPPQ56P03 285 aaPredicted RBP8.07□□□□□ -1.12
AC004943.3-201ENST00000624116 MCATQ8IVS2 390 aaKnown RBP8.07□□□□□ -1.12
AC004943.3-201ENST00000624116 ABHD4Q8TB40 342 aa8.07□□□□□ -1.12
AC004943.3-201ENST00000624116 NOC4LQ9BVI4 516 aaKnown RBP8.07□□□□□ -1.12
AC004943.3-201ENST00000624116 TTC6Q86TZ1 520 aa8.06□□□□□ -1.12
AC004943.3-201ENST00000624116 CCDC84Q86UT8 332 aaPredicted RBP8.06□□□□□ -1.12
AC004943.3-201ENST00000624116 DUSP9Q99956 384 aaKnown RBP8.06□□□□□ -1.12
AC004943.3-201ENST00000624116 DPH2Q9BQC3 489 aaPredicted RBP8.06□□□□□ -1.12
AC004943.3-201ENST00000624116 NSUN3Q9H649 340 aaKnown RBP8.06□□□□□ -1.12
AC004943.3-201ENST00000624116 GPATCH2Q9NW75 528 aa8.06□□□□□ -1.12
AC004943.3-201ENST00000624116 ST13P50502 369 aaKnown RBP8.05□□□□□ -1.12
AC004943.3-201ENST00000624116 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
AC004943.3-201ENST00000624116 SYTL4Q96C24 671 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms