RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 LRRIQ3A6PVS8 624 aaPredicted RBP8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 H7C1W4 665 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 AHCYL1O43865 530 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 ZEB2O60315 1214 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 ADD1P35611 737 aaKnown RBP8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 CCT2P78371 535 aaKnown RBP8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 CEBPZQ03701 1054 aaKnown RBP8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 IFFO1Q0D2I5 559 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 PSMD2Q13200 908 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 PDIA5Q14554 519 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 NAA25Q14CX7 972 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 TBC1D25Q3MII6 688 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 HAUS7Q99871 368 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 GOLPH3LQ9H4A5 285 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 KAT14Q9H8E8 782 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 DDX20Q9UHI6 824 aaKnown RBP8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 RFX7Q2KHR2 1363 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 IMPDH2P12268 514 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 VSNL1P62760 191 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 TJP1Q07157 1748 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 SLMAPQ14BN4 828 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 CCDC40Q4G0X9 1142 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 ANKRD13DQ6ZTN6 518 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 KRT28Q7Z3Y7 464 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 CCAR1Q8IX12 1150 aaKnown RBP8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 RBM12BQ8IXT5 1001 aaKnown RBP8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 NSUN7Q8NE18 718 aaKnown RBP8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 SMARCC2Q8TAQ2 1214 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 CCDC12Q8WUD4 166 aaPredicted RBP8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 DDX17Q92841 729 aaKnown RBP8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 CAPS2Q9BXY5 557 aa8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 ACTR5Q9H9F9 607 aaPredicted RBP8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 U3KPZ7 1027 aaPredicted RBP8.47□□□□□ -1.05
TRIM49B-202ENST00000622138 GOLGA6L7A0A1B0GV03 622 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 CYP27B1O15528 508 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 MYO1BO43795 1136 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 GBP2P32456 591 aaPredicted RBP8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 ACTN3Q08043 901 aaPredicted RBP8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 KRT32Q14532 448 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 MCMDC2Q4G0Z9 681 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 CCDC73Q6ZRK6 1079 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 TTLL7Q6ZT98 887 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 MFN1Q8IWA4 741 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 RAPGEF4Q8WZA2 1011 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 OSBPL9Q96SU4 736 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 NCOA5Q9HCD5 579 aaKnown RBP8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 HPCAL4Q9UM19 191 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 KIF1AQ12756 1690 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 COL18A1P39060 1754 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 SH3TC1Q8TE82 1336 aa8.46□□□□□ -1.05
TRIM49B-202ENST00000622138 A0A087WZG4 1122 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 PTPDC1A2A3K4 754 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 LIN7AO14910 233 aaPredicted RBP8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 PFKFB2O60825 505 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 FESP07332 822 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 WHAMMP3Q1A5X7 153 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 LMBR1LQ6UX01 489 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 ATG9AQ7Z3C6 839 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 ILDR1Q86SU0 546 aaPredicted RBP8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 TMEM139Q8IV31 216 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 SPDL1Q96EA4 605 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 MMTAG2Q9BU76 263 aaKnown RBP8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 SUGCTQ9HAC7 445 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 CFAP45Q9UL16 551 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 C1orf167Q5SNV9 1468 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 ZC3H4Q9UPT8 1303 aaKnown RBP8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 LAMB4A4D0S4 1761 aa8.46□□□□□ -1.06
TRIM49B-202ENST00000622138 GOLGA6CA6NDK9 693 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 H3BQV1 296 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 SNRPA1P09661 255 aaKnown RBP8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 GOLGA6DP0CG33 693 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 SKOR1P84550 965 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 FOXO4P98177 505 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 CCDC96Q2M329 555 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 KBTBD3Q8NAB2 608 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 LMBR1Q8WVP7 490 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 ZBTB10Q96DT7 871 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 USP28Q96RU2 1077 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 PRDM16Q9HAZ2 1276 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 SLC40A1Q9NP59 571 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 GPHNQ9NQX3 736 aaPredicted RBP8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 GOLGA6AQ9NYA3 693 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 PALLDQ8WX93 1383 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 ADAMTSL3P82987 1691 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 NUP188Q5SRE5 1749 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 NBPF26B4DH59 902 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 IKBKBO14920 756 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 STX10O60499 249 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 CDKL5O76039 1030 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 RTN3O95197 1032 aaPredicted RBP8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 PIP4K2BP78356 416 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 GUCY1B3Q02153 619 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms