RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
PCDHGA11-203ENST00000622044 MAP9Q49MG5 647 aa12.9□□□□□ -0.34
PCDHGA11-203ENST00000622044 FOXP4Q8IVH2 680 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA11-203ENST00000622044 GSPT2Q8IYD1 628 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-203ENST00000622044 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
PCDHGA11-203ENST00000622044 ITGA6P23229 1130 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 NLRP5P59047 1200 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 CASP8Q14790 479 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 FCHSD1Q86WN1 690 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 VSNL1P62760 191 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 WWC3Q9ULE0 1092 aa12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA11-203ENST00000622044 SRGAP2O75044 1071 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 ZRANB2O95218 330 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 RAD9BQ6WBX8 426 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 PRKAB2O43741 272 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 PHKA1P46020 1223 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 PLCD1P51178 756 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 TANGO6Q9C0B7 1094 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 GNL3LQ9NVN8 582 aaKnown RBP12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 PXDNQ92626 1479 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 MNAT1P51948 309 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 IRX3P78415 501 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 FOXO4P98177 505 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 SETQ01105 290 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 PNKPQ96T60 521 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 TFR2Q9UP52 801 aa12.88□□□□□ -0.35
PCDHGA11-203ENST00000622044 NEDD4P46934 1319 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 FAM205CA6NFA0 338 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 ZEB2O60315 1214 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 PDE6AP16499 860 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 HDAC6Q9UBN7 1215 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 MYO6Q9UM54 1294 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 ADGRG1Q9Y653 693 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 UBN2Q6ZU65 1347 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 ATP8B1O43520 1251 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 MCAMP43121 646 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 E2F4Q16254 413 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 ENOX1Q8TC92 643 aaKnown RBP12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 UTYO14607 1347 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 RNF40O75150 1001 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 MTIF2P46199 727 aaKnown RBP12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 STIM1Q13586 685 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 TRIM10Q9UDY6 481 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 TECPR2O15040 1411 aa12.87□□□□□ -0.35
PCDHGA11-203ENST00000622044 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 SHTN1A0MZ66 631 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 LIG3P49916 1009 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 SPA17Q15506 151 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 PIK3AP1Q6ZUJ8 805 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 KRT23Q9C075 422 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 INTS13Q9NVM9 706 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 ZNF335Q9H4Z2 1342 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 SALL1Q9NSC2 1324 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 C3P01024 1663 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 KIAA0754O94854 1291 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 DEXIO95424 95 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 IDEP14735 1019 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 SPATA1Q5VX52 437 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 FOXR1Q6PIV2 292 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 SDR42E1Q8WUS8 393 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 GREM2Q9H772 168 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 PIH1D3Q9NQM4 214 aaKnown RBP12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 CYP27B1O15528 508 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 MARCH6O60337 910 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 STAT6P42226 847 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 KCNJ6P48051 423 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 CCDC47Q96A33 483 aaKnown RBP12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
PCDHGA11-203ENST00000622044 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 PATL2C9JE40 543 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 CYP7A1P22680 504 aa12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 KRT2P35908 639 aa12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 FXR1P51114 621 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 RNF187Q5TA31 235 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA11-203ENST00000622044 NBPF14Q5TI25 921 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms