RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KBTBD4Q9NVX7 518 aa7.83□□□□□ -1.16
BRCA1-229ENST00000621897 MINDY4BA8MYZ0 360 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 PRR33A8MZF0 331 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 GARTP22102 1010 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 PRKCQQ04759 706 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 AOC3Q16853 763 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 CBLL1Q75N03 491 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 ERMP1Q7Z2K6 904 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 MRPL41Q8IXM3 137 aaKnown RBP7.82□□□□□ -1.16
BRCA1-229ENST00000621897 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 MFSD2AQ8NA29 543 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 GATAD2BQ8WXI9 593 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 ACSF2Q96CM8 615 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-229ENST00000621897 MISP3Q96FF7 219 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 TMEM87BQ96K49 555 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 PRDM5Q9NQX1 630 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-229ENST00000621897 VAV3Q9UKW4 847 aa7.82□□□□□ -1.16
BRCA1-229ENST00000621897 TMEM265A0A087WTH1 108 aa7.81□□□□□ -1.16
BRCA1-229ENST00000621897 LDLRAD1Q5T700 205 aa7.81□□□□□ -1.16
BRCA1-229ENST00000621897 LETMD1Q6P1Q0 360 aa7.81□□□□□ -1.16
BRCA1-229ENST00000621897 AGBL5Q8NDL9 886 aa7.81□□□□□ -1.16
BRCA1-229ENST00000621897 TPX2Q9ULW0 747 aaKnown RBP7.81□□□□□ -1.16
BRCA1-229ENST00000621897 MAPK8IP1Q9UQF2 711 aa7.81□□□□□ -1.16
BRCA1-229ENST00000621897 ITGAEP38570 1179 aa7.8□□□□□ -1.16
BRCA1-229ENST00000621897 PDE4BQ07343 736 aa7.8□□□□□ -1.16
BRCA1-229ENST00000621897 GOLM1Q8NBJ4 401 aa7.8□□□□□ -1.16
BRCA1-229ENST00000621897 FBXO27Q8NI29 283 aa7.8□□□□□ -1.16
BRCA1-229ENST00000621897 HRASLS5Q96KN8 279 aa7.8□□□□□ -1.16
BRCA1-229ENST00000621897 POLR3KQ9Y2Y1 108 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-229ENST00000621897 BPNT1O95861 308 aa7.79□□□□□ -1.16
BRCA1-229ENST00000621897 PWP1Q13610 501 aa7.79□□□□□ -1.16
BRCA1-229ENST00000621897 PLCL1Q15111 1095 aa7.79□□□□□ -1.16
BRCA1-229ENST00000621897 SNAP47Q5SQN1 464 aa7.79□□□□□ -1.16
BRCA1-229ENST00000621897 SLC6A19Q695T7 634 aa7.79□□□□□ -1.16
BRCA1-229ENST00000621897 CDH24Q86UP0 819 aa7.79□□□□□ -1.16
BRCA1-229ENST00000621897 MCATQ8IVS2 390 aaKnown RBP7.79□□□□□ -1.16
BRCA1-229ENST00000621897 ADAM30Q9UKF2 790 aa7.79□□□□□ -1.16
BRCA1-229ENST00000621897 GNAT3A8MTJ3 354 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 UPK3BL1B0FP48 263 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 UPK3BL2E5RIL1 263 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 GRIN3BO60391 1043 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 PLCG1P19174 1290 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 FUT4P22083 530 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 FBXL19Q6PCT2 694 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 ADAMTS6Q9UKP5 1117 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 SNX11Q9Y5W9 270 aa7.78□□□□□ -1.16
BRCA1-229ENST00000621897 ZNF865P0CJ78 1059 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-229ENST00000621897 ZNF792Q3KQV3 632 aa7.77□□□□□ -1.17
BRCA1-229ENST00000621897 C22orf34Q6ZV56 151 aa7.77□□□□□ -1.17
BRCA1-229ENST00000621897 PITPNM2Q9BZ72 1349 aa7.77□□□□□ -1.17
BRCA1-229ENST00000621897 TLR3O15455 904 aaKnown RBP7.76□□□□□ -1.17
BRCA1-229ENST00000621897 CBX7O95931 251 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 TRIM26Q12899 539 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-229ENST00000621897 TMEM201Q5SNT2 666 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 FAM196AQ6ZSG2 479 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 REC114Q7Z4M0 266 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 MFSD4AQ8N468 514 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 DNAJB8Q8NHS0 232 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 KCNQ5Q9NR82 932 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 REV1Q9UBZ9 1251 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 GGT7Q9UJ14 662 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 CAPN6Q9Y6Q1 641 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
BRCA1-229ENST00000621897 DNAJA2O60884 412 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
BRCA1-229ENST00000621897 EIF4A3P38919 411 aaKnown RBP7.75□□□□□ -1.17
BRCA1-229ENST00000621897 CLCN7P51798 805 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 MPP2Q14168 576 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 CDKAL1Q5VV42 579 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 FAM13CQ8NE31 585 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 PPP1R13LQ8WUF5 828 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 HSPA12BQ96MM6 686 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 PRDM7Q9NQW5 492 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 SEMA3GQ9NS98 782 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 MBNL3Q9NUK0 354 aaKnown RBP7.75□□□□□ -1.17
BRCA1-229ENST00000621897 ADAMTS1Q9UHI8 967 aa7.75□□□□□ -1.17
BRCA1-229ENST00000621897 FAM155AB1AL88 458 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-229ENST00000621897 GREM1O60565 184 aa7.74□□□□□ -1.17
BRCA1-229ENST00000621897 HTR3BO95264 441 aa7.74□□□□□ -1.17
BRCA1-229ENST00000621897 CRKP46108 304 aa7.74□□□□□ -1.17
BRCA1-229ENST00000621897 ANGEL2Q5VTE6 544 aaKnown RBP7.74□□□□□ -1.17
BRCA1-229ENST00000621897 HS2ST1Q7LGA3 356 aa7.74□□□□□ -1.17
BRCA1-229ENST00000621897 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
BRCA1-229ENST00000621897 ASB11Q8WXH4 323 aa7.74□□□□□ -1.17
BRCA1-229ENST00000621897 ST14Q9Y5Y6 855 aa7.74□□□□□ -1.17
BRCA1-229ENST00000621897 CHURC1-FNTBB4DL54 471 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 H3BS24 57 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 ITGB5P18084 799 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 IKZF1Q13422 519 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
BRCA1-229ENST00000621897 ZNF746Q6NUN9 644 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-229ENST00000621897 CYB5D2Q8WUJ1 264 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 ZNF296Q8WUU4 475 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-229ENST00000621897 BACH2Q9BYV9 841 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 ATP13A1Q9HD20 1204 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 KLHL3Q9UH77 587 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 CEP131Q9UPN4 1083 aa7.73□□□□□ -1.17
BRCA1-229ENST00000621897 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
BRCA1-229ENST00000621897 RBM47A0AV96 593 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms