RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 FOXP4Q8IVH2 680 aaPredicted RBP18.78■□□□□ 0.6
GTF2I-220ENST00000621640 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
GTF2I-220ENST00000621640 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
GTF2I-220ENST00000621640 EAF2Q96CJ1 260 aaPredicted RBP18.78■□□□□ 0.6
GTF2I-220ENST00000621640 CCDC8Q9H0W5 538 aaPredicted RBP18.78■□□□□ 0.6
GTF2I-220ENST00000621640 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
GTF2I-220ENST00000621640 PLXNB2O15031 1838 aa18.78■□□□□ 0.6
GTF2I-220ENST00000621640 LAMA3Q16787 3333 aa18.78■□□□□ 0.6
GTF2I-220ENST00000621640 PEX10O60683 326 aa18.77■□□□□ 0.6
GTF2I-220ENST00000621640 IGSF3O75054 1194 aa18.77■□□□□ 0.6
GTF2I-220ENST00000621640 GDF11O95390 407 aa18.77■□□□□ 0.6
GTF2I-220ENST00000621640 HOXA7P31268 230 aaPredicted RBP18.77■□□□□ 0.6
GTF2I-220ENST00000621640 CRACR2BQ8N4Y2 399 aaPredicted RBP18.77■□□□□ 0.6
GTF2I-220ENST00000621640 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.77■□□□□ 0.6
GTF2I-220ENST00000621640 ZBTB21Q9ULJ3 1066 aa18.77■□□□□ 0.6
GTF2I-220ENST00000621640 HMGCRP04035 888 aa18.76■□□□□ 0.59
GTF2I-220ENST00000621640 CAPN2P17655 700 aa18.76■□□□□ 0.59
GTF2I-220ENST00000621640 CYP7A1P22680 504 aa18.76■□□□□ 0.59
GTF2I-220ENST00000621640 IRX3P78415 501 aaPredicted RBP18.76■□□□□ 0.59
GTF2I-220ENST00000621640 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
GTF2I-220ENST00000621640 TRIM32Q13049 653 aa18.76■□□□□ 0.59
GTF2I-220ENST00000621640 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
GTF2I-220ENST00000621640 TXNRD2Q9NNW7 524 aa18.76■□□□□ 0.59
GTF2I-220ENST00000621640 TMOD4Q9NZQ9 345 aa18.76■□□□□ 0.59
GTF2I-220ENST00000621640 NR2E3Q9Y5X4 410 aa18.76■□□□□ 0.59
GTF2I-220ENST00000621640 C19orf81C9J6K1 198 aa18.75■□□□□ 0.59
GTF2I-220ENST00000621640 IDH1O75874 414 aaKnown RBP18.75■□□□□ 0.59
GTF2I-220ENST00000621640 HERVK_113P62684 666 aa18.75■□□□□ 0.59
GTF2I-220ENST00000621640 CEP85Q6P2H3 762 aa18.75■□□□□ 0.59
GTF2I-220ENST00000621640 POTEEQ6S8J3 1075 aa18.75■□□□□ 0.59
GTF2I-220ENST00000621640 DIS3LQ8TF46 1054 aaKnown RBP18.75■□□□□ 0.59
GTF2I-220ENST00000621640 TRIM34Q9BYJ4 488 aa18.75■□□□□ 0.59
GTF2I-220ENST00000621640 GINM1Q9NU53 330 aa18.75■□□□□ 0.59
GTF2I-220ENST00000621640 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
GTF2I-220ENST00000621640 USP17L10C9JJH3 530 aa18.74■□□□□ 0.59
GTF2I-220ENST00000621640 HLA-DOAP06340 250 aa18.74■□□□□ 0.59
GTF2I-220ENST00000621640 MIGA1Q8NAN2 632 aa18.74■□□□□ 0.59
GTF2I-220ENST00000621640 TRIB2Q92519 343 aa18.74■□□□□ 0.59
GTF2I-220ENST00000621640 PAWRQ96IZ0 340 aaKnown RBP18.74■□□□□ 0.59
GTF2I-220ENST00000621640 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
GTF2I-220ENST00000621640 EMILIN3Q9NT22 766 aa18.74■□□□□ 0.59
GTF2I-220ENST00000621640 ALPK3Q96L96 1907 aa18.73■□□□□ 0.59
GTF2I-220ENST00000621640 EVI5O60447 810 aa18.73■□□□□ 0.59
GTF2I-220ENST00000621640 MAGEB6Q8N7X4 407 aa18.73■□□□□ 0.59
GTF2I-220ENST00000621640 GPRC5AQ8NFJ5 357 aa18.73■□□□□ 0.59
GTF2I-220ENST00000621640 RBPJLQ9UBG7 517 aa18.73■□□□□ 0.59
GTF2I-220ENST00000621640 RPTORQ8N122 1335 aa18.73■□□□□ 0.59
GTF2I-220ENST00000621640 GH2P01242 217 aa18.72■□□□□ 0.59
GTF2I-220ENST00000621640 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
GTF2I-220ENST00000621640 TATDN1Q6P1N9 297 aa18.72■□□□□ 0.59
GTF2I-220ENST00000621640 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
GTF2I-220ENST00000621640 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
GTF2I-220ENST00000621640 MYH1P12882 1939 aa18.71■□□□□ 0.59
GTF2I-220ENST00000621640 MAP3K21Q5TCX8 1036 aa18.71■□□□□ 0.59
GTF2I-220ENST00000621640 NECAB2Q7Z6G3 386 aa18.71■□□□□ 0.59
GTF2I-220ENST00000621640 CERS3Q8IU89 383 aa18.71■□□□□ 0.59
GTF2I-220ENST00000621640 SOCS4Q8WXH5 440 aa18.71■□□□□ 0.59
GTF2I-220ENST00000621640 EHD4Q9H223 541 aa18.71■□□□□ 0.59
GTF2I-220ENST00000621640 PORCNQ9H237 461 aa18.71■□□□□ 0.59
GTF2I-220ENST00000621640 HMX1Q9NP08 348 aaPredicted RBP18.71■□□□□ 0.59
GTF2I-220ENST00000621640 XRCC5P13010 732 aaKnown RBP18.7■□□□□ 0.58
GTF2I-220ENST00000621640 CYP2B6P20813 491 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 USP5P45974 858 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 ERVK-9P63128 1117 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 ERVK-24P63145 666 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 Q3C1V9 767 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 AACSQ86V21 672 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 ANKLE1Q8NAG6 615 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 PANK1Q8TE04 598 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 USP6NLQ92738 828 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 NUDT12Q9BQG2 462 aa18.7■□□□□ 0.58
GTF2I-220ENST00000621640 MAPK4P31152 587 aa18.69■□□□□ 0.58
GTF2I-220ENST00000621640 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
GTF2I-220ENST00000621640 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
GTF2I-220ENST00000621640 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
GTF2I-220ENST00000621640 MIER1Q8N108 512 aa18.69■□□□□ 0.58
GTF2I-220ENST00000621640 C12orf42Q96LP6 360 aa18.69■□□□□ 0.58
GTF2I-220ENST00000621640 RIOK1Q9BRS2 568 aaKnown RBP18.69■□□□□ 0.58
GTF2I-220ENST00000621640 SERPINB13Q9UIV8 391 aa18.69■□□□□ 0.58
GTF2I-220ENST00000621640 PRKAR2AP13861 404 aaKnown RBP18.68■□□□□ 0.58
GTF2I-220ENST00000621640 ZYXQ15942 572 aaKnown RBP18.68■□□□□ 0.58
GTF2I-220ENST00000621640 TMED8Q6PL24 325 aaPredicted RBP18.68■□□□□ 0.58
GTF2I-220ENST00000621640 GPR142Q7Z601 462 aa18.68■□□□□ 0.58
GTF2I-220ENST00000621640 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
GTF2I-220ENST00000621640 PAGR1Q9BTK6 254 aa18.68■□□□□ 0.58
GTF2I-220ENST00000621640 IL1RAPL2Q9NP60 686 aa18.68■□□□□ 0.58
GTF2I-220ENST00000621640 OGDHLQ9ULD0 1010 aa18.68■□□□□ 0.58
GTF2I-220ENST00000621640 CNMDO75829 334 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 SHMT1P34896 483 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 PLCD1P51178 756 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 CCL14Q16627 93 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 MORN1Q5T089 497 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 ACER1Q8TDN7 264 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 FEZ1Q99689 392 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 KIAA1683Q9H0B3 1180 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 STAP2Q9UGK3 403 aa18.67■□□□□ 0.58
GTF2I-220ENST00000621640 A0A1W2PPC1 479 aa18.66■□□□□ 0.58
GTF2I-220ENST00000621640 ZKSCAN1P17029 563 aaPredicted RBP18.66■□□□□ 0.58
GTF2I-220ENST00000621640 VCAM1P19320 739 aa18.66■□□□□ 0.58
GTF2I-220ENST00000621640 EVX2Q03828 476 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms