RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 STRBPQ96SI9 672 aaKnown RBP12.19□□□□□ -0.46
CDH1-214ENST00000621016 ZNF335Q9H4Z2 1342 aaPredicted RBP12.18□□□□□ -0.46
CDH1-214ENST00000621016 TNS3Q68CZ2 1445 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 SLIT3O75094 1523 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
CDH1-214ENST00000621016 NRDCO43847 1150 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 YEATS4O95619 227 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 NLRP12P59046 1061 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 E4F1Q66K89 784 aaPredicted RBP12.18□□□□□ -0.46
CDH1-214ENST00000621016 PPP1R12AO14974 1030 aaPredicted RBP12.18□□□□□ -0.46
CDH1-214ENST00000621016 SLU7O95391 586 aaKnown RBP12.18□□□□□ -0.46
CDH1-214ENST00000621016 CMA1P23946 247 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 GYG1P46976 350 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 MAP9Q49MG5 647 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 FOXP4Q8IVH2 680 aaPredicted RBP12.18□□□□□ -0.46
CDH1-214ENST00000621016 UBAC1Q9BSL1 405 aa12.18□□□□□ -0.46
CDH1-214ENST00000621016 EPB41L4AQ9HCS5 686 aaPredicted RBP12.18□□□□□ -0.46
CDH1-214ENST00000621016 CDKL5O76039 1030 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
CDH1-214ENST00000621016 FBXW10Q5XX13 1052 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 SARM1Q6SZW1 724 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
CDH1-214ENST00000621016 GIMAP7Q8NHV1 300 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 AK7Q96M32 723 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 VPS54Q9P1Q0 977 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 PCDHB6Q9Y5E3 794 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 UBN2Q6ZU65 1347 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 A0A1W2PQ27 194 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 A0A1W2PQ64 194 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 A0A1W2PQD8 194 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 CYP7A1P22680 504 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 AKAP17AQ02040 695 aaKnown RBP12.17□□□□□ -0.46
CDH1-214ENST00000621016 PDE4BQ07343 736 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 WTAPQ15007 396 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 SUSD4Q5VX71 490 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 TRIM22Q8IYM9 498 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 ADAM21Q9UKJ8 722 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 TACC3Q9Y6A5 838 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 ZMYM6O95789 1325 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 KIF1CO43896 1103 aaKnown RBP12.17□□□□□ -0.46
CDH1-214ENST00000621016 CSF1RP07333 972 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 SSR1P43307 286 aaKnown RBP12.17□□□□□ -0.46
CDH1-214ENST00000621016 SMC1AQ14683 1233 aaKnown RBP12.17□□□□□ -0.46
CDH1-214ENST00000621016 RTN1Q16799 776 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 CEP120Q8N960 986 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 DHX58Q96C10 678 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 THOC1Q96FV9 657 aaKnown RBP12.17□□□□□ -0.46
CDH1-214ENST00000621016 PPP1R13BQ96KQ4 1090 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 LY9Q9HBG7 655 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 VPS18Q9P253 973 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 SERTAD1Q9UHV2 236 aa12.17□□□□□ -0.46
CDH1-214ENST00000621016 NIP7Q9Y221 180 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDH1-214ENST00000621016 NUTM2BA6NNL0 878 aaPredicted RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 NUTM2EB1AL46 878 aaPredicted RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 EXOC5O00471 708 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 ATL3Q6DD88 541 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 NUTM2AQ8IVF1 878 aaPredicted RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 IGDCC4Q8TDY8 1250 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDH1-214ENST00000621016 G3BP2Q9UN86 482 aaKnown RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 PES1O00541 588 aaKnown RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 PDE8AO60658 829 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 SLC5A1P13866 664 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 EVX2Q03828 476 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 METTL16Q86W50 562 aaKnown RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 ERO1AQ96HE7 468 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 MAPK8IP1Q9UQF2 711 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 GSDMDP57764 484 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 MYL5Q02045 173 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 NCAPHQ15003 741 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 KARSQ15046 597 aaKnown RBP12.16□□□□□ -0.46
CDH1-214ENST00000621016 MMS22LQ6ZRQ5 1243 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 REXO1L1PQ8IX06 675 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 GOLGA5Q8TBA6 731 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 EEF2KMTQ96G04 330 aa12.16□□□□□ -0.46
CDH1-214ENST00000621016 AFDNP55196 1824 aaKnown RBP12.15□□□□□ -0.46
CDH1-214ENST00000621016 RFX7Q2KHR2 1363 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 CYP19A1P11511 503 aaPredicted RBP12.15□□□□□ -0.46
CDH1-214ENST00000621016 PEX19P40855 299 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 SYCP1Q15431 976 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 LPIN2Q92539 896 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 NACAP1Q9BZK3 213 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 CRYBG1Q9Y4K1 1723 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 SASH3O75995 380 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 CDC25AP30304 524 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 CDC25BP30305 580 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
CDH1-214ENST00000621016 FAM53CQ9NYF3 392 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 NFE2L3Q9Y4A8 694 aa12.15□□□□□ -0.46
CDH1-214ENST00000621016 V9GY48 417 aaPredicted RBP12.15□□□□□ -0.46
CDH1-214ENST00000621016 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.47
CDH1-214ENST00000621016 CAMTA1Q9Y6Y1 1673 aa12.15□□□□□ -0.47
CDH1-214ENST00000621016 GSG1L2A8MUP6 293 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 NEMFO60524 1076 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms