RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 SKAP1Q86WV1 359 aa21.87■■□□□ 1.09
LITAF-220ENST00000620789 GINM1Q9NU53 330 aa21.87■■□□□ 1.09
LITAF-220ENST00000620789 RNF186Q9NXI6 227 aa21.87■■□□□ 1.09
LITAF-220ENST00000620789 SAGE1Q9NXZ1 904 aa21.87■■□□□ 1.09
LITAF-220ENST00000620789 SWAP70Q9UH65 585 aa21.87■■□□□ 1.09
LITAF-220ENST00000620789 CCL15-CCL14A0A0B4J2E2 113 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 FOXP2O15409 715 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 CETPP11597 493 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 JAG1P78504 1218 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 CCL15Q16663 113 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 CERKLQ49MI3 558 aaPredicted RBP21.86■■□□□ 1.09
LITAF-220ENST00000620789 CWC27Q6UX04 472 aaKnown RBP21.86■■□□□ 1.09
LITAF-220ENST00000620789 ZNF589Q86UQ0 364 aaPredicted RBP21.86■■□□□ 1.09
LITAF-220ENST00000620789 CCDC84Q86UT8 332 aaPredicted RBP21.86■■□□□ 1.09
LITAF-220ENST00000620789 IFNL1Q8IU54 200 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 DYNLL2Q96FJ2 89 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 ZBTB21Q9ULJ3 1066 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 AFG3L2Q9Y4W6 797 aa21.86■■□□□ 1.09
LITAF-220ENST00000620789 CCDC171Q6TFL3 1326 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 SMIM22K7EJ46 135 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 IGF2BP3O00425 579 aaKnown RBP eCLIP21.85■■□□□ 1.09
LITAF-220ENST00000620789 CXCL11O14625 94 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 SHROOM1Q2M3G4 852 aaPredicted RBP21.85■■□□□ 1.09
LITAF-220ENST00000620789 VPS53Q5VIR6 699 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 C16orf86Q6ZW13 317 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 SLC44A5Q8NCS7 719 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 BRI3BPQ8WY22 251 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 TBC1D2Q9BYX2 928 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 NAPBQ9H115 298 aa21.85■■□□□ 1.09
LITAF-220ENST00000620789 USP17L5A8MUK1 530 aa21.84■■□□□ 1.09
LITAF-220ENST00000620789 MINDY4BA8MYZ0 360 aa21.84■■□□□ 1.09
LITAF-220ENST00000620789 TRPA1O75762 1119 aa21.84■■□□□ 1.09
LITAF-220ENST00000620789 CTCFP49711 727 aaPredicted RBP21.84■■□□□ 1.09
LITAF-220ENST00000620789 MFAP1P55081 439 aaKnown RBP21.84■■□□□ 1.09
LITAF-220ENST00000620789 PTPN18Q99952 460 aa21.84■■□□□ 1.09
LITAF-220ENST00000620789 ROBO3Q96MS0 1386 aa21.84■■□□□ 1.09
LITAF-220ENST00000620789 MYH8P13535 1937 aa21.83■■□□□ 1.09
LITAF-220ENST00000620789 ALDH1A1P00352 501 aa21.83■■□□□ 1.09
LITAF-220ENST00000620789 GH2P01242 217 aa21.83■■□□□ 1.09
LITAF-220ENST00000620789 CDK8P49336 464 aa21.83■■□□□ 1.09
LITAF-220ENST00000620789 ABCB5Q2M3G0 1257 aa21.83■■□□□ 1.09
LITAF-220ENST00000620789 OTUD7BQ6GQQ9 843 aa21.83■■□□□ 1.09
LITAF-220ENST00000620789 AS3MTQ9HBK9 375 aa21.83■■□□□ 1.09
LITAF-220ENST00000620789 TRIM75PA6NK02 468 aa21.82■■□□□ 1.08
LITAF-220ENST00000620789 HSPA8P11142 646 aaKnown RBP21.82■■□□□ 1.08
LITAF-220ENST00000620789 ZNF280CQ8ND82 737 aa21.82■■□□□ 1.08
LITAF-220ENST00000620789 CABP5Q9NP86 173 aa21.82■■□□□ 1.08
LITAF-220ENST00000620789 TSKSQ9UJT2 592 aa21.82■■□□□ 1.08
LITAF-220ENST00000620789 PTPRFP10586 1907 aa21.81■■□□□ 1.08
LITAF-220ENST00000620789 A0A0G2JLL6 359 aaPredicted RBP21.81■■□□□ 1.08
LITAF-220ENST00000620789 HSPD1P10809 573 aaKnown RBP21.81■■□□□ 1.08
LITAF-220ENST00000620789 SPP2Q13103 211 aa21.81■■□□□ 1.08
LITAF-220ENST00000620789 ALX1Q15699 326 aa21.81■■□□□ 1.08
LITAF-220ENST00000620789 PRRT2Q7Z6L0 340 aaPredicted RBP21.81■■□□□ 1.08
LITAF-220ENST00000620789 WDR18Q9BV38 432 aa21.81■■□□□ 1.08
LITAF-220ENST00000620789 CHMLP26374 656 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 MOGSQ13724 837 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 BMP2KLQ5H9B9 411 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 FAM43AQ8N2R8 423 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 CCDC17Q96LX7 622 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 CFHR5Q9BXR6 569 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 RAD50Q92878 1312 aa21.8■■□□□ 1.08
LITAF-220ENST00000620789 BTBD19C9JJ37 291 aa21.79■■□□□ 1.08
LITAF-220ENST00000620789 MPHOSPH10O00566 681 aaKnown RBP21.79■■□□□ 1.08
LITAF-220ENST00000620789 LBX1P52954 281 aa21.79■■□□□ 1.08
LITAF-220ENST00000620789 PPARAQ07869 468 aa21.79■■□□□ 1.08
LITAF-220ENST00000620789 RAB3GAP1Q15042 981 aa21.79■■□□□ 1.08
LITAF-220ENST00000620789 FASTKD5Q7L8L6 764 aaKnown RBP21.79■■□□□ 1.08
LITAF-220ENST00000620789 ZCCHC17Q9NP64 241 aaKnown RBP21.79■■□□□ 1.08
LITAF-220ENST00000620789 FGAP02671 866 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 AKR1B1P15121 316 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 GUCY1A2P33402 732 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 TMEM179Q6ZVK1 233 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 ANKRD23Q86SG2 305 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 STK11IPQ8N1F8 1099 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 RUFY2Q8WXA3 655 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 IL25Q9H293 177 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 ZNF287Q9HBT7 754 aa21.78■■□□□ 1.08
LITAF-220ENST00000620789 TBC1D8O95759 1140 aa21.77■■□□□ 1.08
LITAF-220ENST00000620789 SLC3A2P08195 630 aaKnown RBP21.77■■□□□ 1.08
LITAF-220ENST00000620789 SEPT2Q15019 361 aa21.77■■□□□ 1.08
LITAF-220ENST00000620789 MKNK2Q9HBH9 465 aa21.77■■□□□ 1.08
LITAF-220ENST00000620789 LOC285556D6RIA3 1793 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 USP17L10C9JJH3 530 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 RASA1P20936 1047 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 HMGCS2P54868 508 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 BACE1P56817 501 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 MTMR2Q13614 643 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 SH3D19Q5HYK7 790 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 GPAT2Q6NUI2 795 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 GADL1Q6ZQY3 521 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 PROCA1Q8NCQ7 364 aaPredicted RBP21.76■■□□□ 1.07
LITAF-220ENST00000620789 ANAPC4Q9UJX5 808 aa21.76■■□□□ 1.07
LITAF-220ENST00000620789 PDHXO00330 501 aa21.75■■□□□ 1.07
LITAF-220ENST00000620789 PDE4BQ07343 736 aa21.75■■□□□ 1.07
LITAF-220ENST00000620789 CRHR2Q13324 411 aa21.75■■□□□ 1.07
LITAF-220ENST00000620789 TAF1CQ15572 869 aaPredicted RBP21.75■■□□□ 1.07
LITAF-220ENST00000620789 DSCC1Q9BVC3 393 aa21.75■■□□□ 1.07
LITAF-220ENST00000620789 PRDM10Q9NQV6 1147 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms