RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 SLF2Q8IX21 1173 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 TNMDQ9H2S6 317 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 RTEL1Q9NZ71 1219 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 KCNJ14Q9UNX9 436 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 FAM205AQ6ZU69 1335 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 RCAN1P53805 252 aa23.37■■□□□ 1.33
MMP28-207ENST00000619655 CKAP2LQ8IYA6 745 aa23.37■■□□□ 1.33
MMP28-207ENST00000619655 CDK5RAP2Q96SN8 1893 aa23.37■■□□□ 1.33
MMP28-207ENST00000619655 PLEKHA8P1O95397 391 aa23.37■■□□□ 1.33
MMP28-207ENST00000619655 DBNDD1Q9H9R9 158 aa23.37■■□□□ 1.33
MMP28-207ENST00000619655 DEXIO95424 95 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 TROAPQ12815 778 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 CERS5Q8N5B7 392 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 PDGFDQ9GZP0 370 aaPredicted RBP23.36■■□□□ 1.33
MMP28-207ENST00000619655 DLEC1Q9Y238 1755 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 AKAP17AQ02040 695 aaKnown RBP23.36■■□□□ 1.33
MMP28-207ENST00000619655 MAP3K11Q16584 847 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 LINC00301Q8NCQ3 95 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 DDX19AQ9NUU7 478 aaKnown RBP23.36■■□□□ 1.33
MMP28-207ENST00000619655 DAGLAQ9Y4D2 1042 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 FLT1P17948 1338 aa23.36■■□□□ 1.33
MMP28-207ENST00000619655 GOLPH3LQ9H4A5 285 aa23.35■■□□□ 1.33
MMP28-207ENST00000619655 PCDHA7Q9UN72 937 aa23.35■■□□□ 1.33
MMP28-207ENST00000619655 TTF2Q9UNY4 1162 aaKnown RBP23.35■■□□□ 1.33
MMP28-207ENST00000619655 MYH6P13533 1939 aa23.35■■□□□ 1.33
MMP28-207ENST00000619655 TSPY3P0CV98 308 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 TSPY8P0CW00 308 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 PLCG2P16885 1265 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 SCNN1DP51172 638 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 RHBDL3P58872 404 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 PICALMQ13492 652 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 CERS3Q8IU89 383 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 POLR3EQ9NVU0 708 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 GAKO14976 1311 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.34■■□□□ 1.33
MMP28-207ENST00000619655 USP17L3A6NCW0 530 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 USP17L4A6NCW7 530 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 USP17L1Q7RTZ2 530 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 EYA3Q99504 573 aa23.34■■□□□ 1.33
MMP28-207ENST00000619655 CALM1P0DP23 149 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 CALM2P0DP24 149 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 CALM3P0DP25 149 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 CCDC173Q0VFZ6 552 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 ANO1Q5XXA6 986 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 DEFB132Q7Z7B7 95 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 ZNF444Q8N0Y2 327 aaPredicted RBP23.33■■□□□ 1.33
MMP28-207ENST00000619655 CTCFLQ8NI51 663 aaPredicted RBP23.33■■□□□ 1.33
MMP28-207ENST00000619655 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.33■■□□□ 1.33
MMP28-207ENST00000619655 CLSTN2Q9H4D0 955 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 KCNQ5Q9NR82 932 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 SLX4Q8IY92 1834 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 BTBD18B2RXH4 712 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 SPTLC2O15270 562 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 DDAH1O94760 285 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 MMP1P03956 469 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 PPP2R5BQ15173 497 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 SAFBQ15424 915 aaKnown RBP eCLIP23.33■■□□□ 1.33
MMP28-207ENST00000619655 CCDC73Q6ZRK6 1079 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 FSIP1Q8NA03 581 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 FAM163AQ96GL9 167 aaPredicted RBP23.33■■□□□ 1.33
MMP28-207ENST00000619655 IL17RBQ9NRM6 502 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 RBM28Q9NW13 759 aaKnown RBP23.33■■□□□ 1.33
MMP28-207ENST00000619655 MTMR7Q9Y216 660 aa23.33■■□□□ 1.33
MMP28-207ENST00000619655 DIS3L2Q8IYB7 885 aaKnown RBP23.32■■□□□ 1.32
MMP28-207ENST00000619655 KCNG4Q8TDN1 519 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 PIBF1Q8WXW3 757 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 FUCA2Q9BTY2 467 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 RNF26Q9BY78 433 aaPredicted RBP23.32■■□□□ 1.32
MMP28-207ENST00000619655 KAT14Q9H8E8 782 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 V9GY48 417 aaPredicted RBP23.32■■□□□ 1.32
MMP28-207ENST00000619655 ROBO3Q96MS0 1386 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 U2AF2P26368 475 aaKnown RBP eCLIP23.32■■□□□ 1.32
MMP28-207ENST00000619655 STYK1Q6J9G0 422 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 RCSD1Q6JBY9 416 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 FAM43AQ8N2R8 423 aa23.32■■□□□ 1.32
MMP28-207ENST00000619655 TRIM44Q96DX7 344 aaPredicted RBP23.32■■□□□ 1.32
MMP28-207ENST00000619655 YEATS4O95619 227 aa23.31■■□□□ 1.32
MMP28-207ENST00000619655 CCDC192P0DO97 292 aa23.31■■□□□ 1.32
MMP28-207ENST00000619655 MARCKSP29966 332 aaPredicted RBP23.31■■□□□ 1.32
MMP28-207ENST00000619655 SF3B2Q13435 895 aaKnown RBP23.31■■□□□ 1.32
MMP28-207ENST00000619655 RGS22Q8NE09 1264 aa23.31■■□□□ 1.32
MMP28-207ENST00000619655 VPS54Q9P1Q0 977 aa23.31■■□□□ 1.32
MMP28-207ENST00000619655 STX8Q9UNK0 236 aa23.31■■□□□ 1.32
MMP28-207ENST00000619655 MYH1P12882 1939 aa23.3■■□□□ 1.32
MMP28-207ENST00000619655 A0A1B0GVL5 298 aa23.3■■□□□ 1.32
MMP28-207ENST00000619655 TMTC3Q6ZXV5 915 aa23.3■■□□□ 1.32
MMP28-207ENST00000619655 NOSTRINQ8IVI9 506 aa23.3■■□□□ 1.32
MMP28-207ENST00000619655 BAZ2BQ9UIF8 2168 aaKnown RBP23.3■■□□□ 1.32
MMP28-207ENST00000619655 NR5A1Q13285 461 aa23.3■■□□□ 1.32
MMP28-207ENST00000619655 ADALQ6DHV7 355 aa23.3■■□□□ 1.32
MMP28-207ENST00000619655 RASA1P20936 1047 aa23.29■■□□□ 1.32
MMP28-207ENST00000619655 CDK8P49336 464 aa23.29■■□□□ 1.32
MMP28-207ENST00000619655 FUT2Q10981 343 aa23.29■■□□□ 1.32
MMP28-207ENST00000619655 SRBD1Q8N5C6 995 aaKnown RBP23.29■■□□□ 1.32
MMP28-207ENST00000619655 PNMA1Q8ND90 353 aa23.29■■□□□ 1.32
MMP28-207ENST00000619655 MRPS27Q92552 414 aaKnown RBP23.29■■□□□ 1.32
MMP28-207ENST00000619655 ADAMTSL1Q8N6G6 1762 aa23.29■■□□□ 1.32
MMP28-207ENST00000619655 SNW1Q13573 536 aaKnown RBP23.28■■□□□ 1.32
MMP28-207ENST00000619655 PKN1Q16512 942 aa23.28■■□□□ 1.32
MMP28-207ENST00000619655 KINO60870 393 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms