RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 CDKL5O76039 1030 aa29.39■■■□□ 2.3
VEGFC-202ENST00000618562 PLCG2P16885 1265 aa29.39■■■□□ 2.3
VEGFC-202ENST00000618562 GUCY1B3Q02153 619 aa29.39■■■□□ 2.3
VEGFC-202ENST00000618562 CKAP2LQ8IYA6 745 aa29.39■■■□□ 2.3
VEGFC-202ENST00000618562 SLC16A10Q8TF71 515 aa29.39■■■□□ 2.3
VEGFC-202ENST00000618562 ROBO3Q96MS0 1386 aa29.39■■■□□ 2.3
VEGFC-202ENST00000618562 SCN9AQ15858 1988 aa29.39■■■□□ 2.29
VEGFC-202ENST00000618562 PDE4BQ07343 736 aa29.38■■■□□ 2.29
VEGFC-202ENST00000618562 PODNQ7Z5L7 613 aa29.38■■■□□ 2.29
VEGFC-202ENST00000618562 IQCA1Q86XH1 822 aa29.38■■■□□ 2.29
VEGFC-202ENST00000618562 TEX11Q8IYF3 940 aa29.38■■■□□ 2.29
VEGFC-202ENST00000618562 ZNF654Q8IZM8 581 aa29.38■■■□□ 2.29
VEGFC-202ENST00000618562 CPLX2Q6PUV4 134 aaKnown RBP29.38■■■□□ 2.29
VEGFC-202ENST00000618562 ZNF646O15015 1829 aaPredicted RBP29.37■■■□□ 2.29
VEGFC-202ENST00000618562 F8W031 263 aaPredicted RBP29.37■■■□□ 2.29
VEGFC-202ENST00000618562 CAVIN2O95810 425 aa29.37■■■□□ 2.29
VEGFC-202ENST00000618562 TPM3P06753 285 aa29.37■■■□□ 2.29
VEGFC-202ENST00000618562 RCAN1P53805 252 aa29.37■■■□□ 2.29
VEGFC-202ENST00000618562 PHKBQ93100 1093 aa29.37■■■□□ 2.29
VEGFC-202ENST00000618562 KCNQ5Q9NR82 932 aa29.37■■■□□ 2.29
VEGFC-202ENST00000618562 AP5Z1O43299 807 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 C8orf76Q96K31 380 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 TTF2Q9UNY4 1162 aaKnown RBP29.36■■■□□ 2.29
VEGFC-202ENST00000618562 ADAMTSL1Q8N6G6 1762 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 ANO6Q4KMQ2 910 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 FAM47AQ5JRC9 791 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 OTUD7BQ6GQQ9 843 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 SASS6Q6UVJ0 657 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 DYNLL2Q96FJ2 89 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 SAP30BPQ9UHR5 308 aaKnown RBP29.36■■■□□ 2.29
VEGFC-202ENST00000618562 MYH1P12882 1939 aa29.36■■■□□ 2.29
VEGFC-202ENST00000618562 RTN1Q16799 776 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 FBXO18Q8NFZ0 1043 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 USP28Q96RU2 1077 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 FLT1P17948 1338 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 CTAGE5O15320 804 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 PLCD1P51178 756 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 PLCB2Q00722 1185 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 AMOTL1Q8IY63 956 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 RGS22Q8NE09 1264 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 PIBF1Q8WXW3 757 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 GJB4Q9NTQ9 266 aa29.35■■■□□ 2.29
VEGFC-202ENST00000618562 GOLGB1Q14789 3259 aaKnown RBP29.34■■■□□ 2.29
VEGFC-202ENST00000618562 NMT2O60551 498 aa29.34■■■□□ 2.29
VEGFC-202ENST00000618562 IFIT1BQ5T764 474 aaKnown RBP29.34■■■□□ 2.29
VEGFC-202ENST00000618562 CC2D2BQ6DHV5 1058 aa29.34■■■□□ 2.29
VEGFC-202ENST00000618562 AIFM3Q96NN9 605 aa29.34■■■□□ 2.29
VEGFC-202ENST00000618562 ECE2O60344 883 aa29.33■■■□□ 2.29
VEGFC-202ENST00000618562 IARSP41252 1262 aaKnown RBP29.33■■■□□ 2.29
VEGFC-202ENST00000618562 ILDR1Q86SU0 546 aaPredicted RBP29.33■■■□□ 2.29
VEGFC-202ENST00000618562 FANCBQ8NB91 859 aa29.33■■■□□ 2.29
VEGFC-202ENST00000618562 CBX8Q9HC52 389 aa29.33■■■□□ 2.29
VEGFC-202ENST00000618562 KIF13BQ9NQT8 1826 aa29.33■■■□□ 2.29
VEGFC-202ENST00000618562 POLR3DP05423 398 aaPredicted RBP29.33■■■□□ 2.29
VEGFC-202ENST00000618562 IFNAR1P17181 557 aa29.33■■■□□ 2.29
VEGFC-202ENST00000618562 CEBPZQ03701 1054 aaKnown RBP29.33■■■□□ 2.29
VEGFC-202ENST00000618562 NUP133Q8WUM0 1156 aa29.33■■■□□ 2.29
VEGFC-202ENST00000618562 GOLGA6L6A8MZA4 724 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 C21orf2O43822 256 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 CCDC125Q86Z20 511 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 R3HCC1Q9Y3T6 440 aaKnown RBP29.32■■■□□ 2.28
VEGFC-202ENST00000618562 STK36Q9NRP7 1315 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 TSPY2A6NKD2 308 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 SCNN1DP51172 638 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 AOC3Q16853 763 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 CCDC73Q6ZRK6 1079 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 LUZP1Q86V48 1076 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 CCAR1Q8IX12 1150 aaKnown RBP29.32■■■□□ 2.28
VEGFC-202ENST00000618562 ALG1Q9BT22 464 aa29.32■■■□□ 2.28
VEGFC-202ENST00000618562 FMNL1O95466 1100 aaPredicted RBP29.3■■■□□ 2.28
VEGFC-202ENST00000618562 KCNA3P22001 575 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 STRIP1Q5VSL9 837 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 TTLL6Q8N841 843 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 SLC44A5Q8NCS7 719 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 FTOQ9C0B1 505 aaKnown RBP eCLIP29.3■■■□□ 2.28
VEGFC-202ENST00000618562 TTC12Q9H892 705 aaPredicted RBP29.3■■■□□ 2.28
VEGFC-202ENST00000618562 CCDC196A0A1B0GTZ2 297 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 UBE2Q2LH0YL09 131 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 SSRP1Q08945 709 aaKnown RBP29.3■■■□□ 2.28
VEGFC-202ENST00000618562 SLC26A6Q9BXS9 759 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 RTEL1Q9NZ71 1219 aa29.3■■■□□ 2.28
VEGFC-202ENST00000618562 DPEP1P16444 411 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 NT5C2P49902 561 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 DACT2Q5SW24 774 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 CATIPQ7Z7H3 387 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 NBPF11Q86T75 865 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 TFAP4Q01664 338 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 FAM160A1Q05DH4 1040 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 TROAPQ12815 778 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 HHIPL2Q6UWX4 724 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 ZNF830Q96NB3 372 aaPredicted RBP29.29■■■□□ 2.28
VEGFC-202ENST00000618562 MKNK2Q9HBH9 465 aa29.29■■■□□ 2.28
VEGFC-202ENST00000618562 ZNF165P49910 485 aa29.28■■■□□ 2.28
VEGFC-202ENST00000618562 FKBP1AP62942 108 aaKnown RBP29.28■■■□□ 2.28
VEGFC-202ENST00000618562 RCSD1Q6JBY9 416 aa29.28■■■□□ 2.28
VEGFC-202ENST00000618562 BRAPQ7Z569 592 aa29.28■■■□□ 2.28
VEGFC-202ENST00000618562 CMTR1Q8N1G2 835 aaKnown RBP29.28■■■□□ 2.28
VEGFC-202ENST00000618562 SUPT20HQ8NEM7 779 aa29.28■■■□□ 2.28
VEGFC-202ENST00000618562 PPP2R5BQ15173 497 aa29.27■■■□□ 2.28
VEGFC-202ENST00000618562 ENGASEQ8NFI3 743 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms