RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 METAP2P50579 478 aaKnown RBP eCLIP17.09■□□□□ 0.33
SRRT-217ENST00000618411 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 ZNF579Q8NAF0 562 aaKnown RBP17.09■□□□□ 0.33
SRRT-217ENST00000618411 RIN2Q8WYP3 895 aaPredicted RBP17.09■□□□□ 0.33
SRRT-217ENST00000618411 GOLGA6AQ9NYA3 693 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 SHTN1A0MZ66 631 aa17.08■□□□□ 0.33
SRRT-217ENST00000618411 AGPSO00116 658 aa17.08■□□□□ 0.33
SRRT-217ENST00000618411 KIF1CO43896 1103 aaKnown RBP17.08■□□□□ 0.33
SRRT-217ENST00000618411 ERVK-24P63145 666 aa17.08■□□□□ 0.33
SRRT-217ENST00000618411 KCNV1Q6PIU1 500 aa17.08■□□□□ 0.33
SRRT-217ENST00000618411 FBXO2Q9UK22 296 aaPredicted RBP17.08■□□□□ 0.33
SRRT-217ENST00000618411 PSMD14O00487 310 aa17.08■□□□□ 0.32
SRRT-217ENST00000618411 INPP5BP32019 993 aa17.08■□□□□ 0.32
SRRT-217ENST00000618411 TIMM10P62072 90 aa17.08■□□□□ 0.32
SRRT-217ENST00000618411 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
SRRT-217ENST00000618411 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
SRRT-217ENST00000618411 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
SRRT-217ENST00000618411 ANGEL1Q9UNK9 670 aaKnown RBP17.08■□□□□ 0.32
SRRT-217ENST00000618411 BCAS4Q8TDM0 211 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 A1CFQ9NQ94 594 aaKnown RBP17.07■□□□□ 0.32
SRRT-217ENST00000618411 ABHD10Q9NUJ1 306 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 SYNRGQ9UMZ2 1314 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 ACTN4O43707 911 aaKnown RBP17.07■□□□□ 0.32
SRRT-217ENST00000618411 ZFYP08048 801 aaPredicted RBP17.07■□□□□ 0.32
SRRT-217ENST00000618411 ATG9AQ7Z3C6 839 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
SRRT-217ENST00000618411 CAPS2Q9BXY5 557 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 LTN1O94822 1766 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 ATXN2Q99700 1313 aaKnown RBP17.07■□□□□ 0.32
SRRT-217ENST00000618411 ZNF213O14771 459 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 EIF3HO15372 352 aaKnown RBP eCLIP17.07■□□□□ 0.32
SRRT-217ENST00000618411 MYL6BP14649 208 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 CUL4BQ13620 913 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 FBXW10Q5XX13 1052 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 CCNI2Q6ZMN8 369 aaPredicted RBP17.07■□□□□ 0.32
SRRT-217ENST00000618411 NOSTRINQ8IVI9 506 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 SAR1BQ9Y6B6 198 aa17.07■□□□□ 0.32
SRRT-217ENST00000618411 A6NNZ2 444 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
SRRT-217ENST00000618411 CKAP4Q07065 602 aaKnown RBP17.06■□□□□ 0.32
SRRT-217ENST00000618411 TUBB8Q3ZCM7 444 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 GRAMD1CQ8IYS0 662 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 PRPF38AQ8NAV1 312 aaKnown RBP17.06■□□□□ 0.32
SRRT-217ENST00000618411 TACO1Q9BSH4 297 aaKnown RBP17.06■□□□□ 0.32
SRRT-217ENST00000618411 SELENOOQ9BVL4 669 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 MYH8P13535 1937 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 GOLGA6BA6NDN3 693 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 TRIM14Q14142 442 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 PAPD7Q5XG87 772 aaKnown RBP17.06■□□□□ 0.32
SRRT-217ENST00000618411 PHKBQ93100 1093 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 MMS19Q96T76 1030 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 HAUS4Q9H6D7 363 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 AMOTL2Q9Y2J4 779 aa17.06■□□□□ 0.32
SRRT-217ENST00000618411 APPP05067 770 aa17.05■□□□□ 0.32
SRRT-217ENST00000618411 SETQ01105 290 aaPredicted RBP17.05■□□□□ 0.32
SRRT-217ENST00000618411 LMBR1LQ6UX01 489 aa17.05■□□□□ 0.32
SRRT-217ENST00000618411 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
SRRT-217ENST00000618411 TMEM94Q12767 1356 aa17.05■□□□□ 0.32
SRRT-217ENST00000618411 PXDNQ92626 1479 aa17.05■□□□□ 0.32
SRRT-217ENST00000618411 A0A087WZG4 1122 aa17.05■□□□□ 0.32
SRRT-217ENST00000618411 IL15P40933 162 aaPredicted RBP17.05■□□□□ 0.32
SRRT-217ENST00000618411 GRIN1Q05586 938 aa17.05■□□□□ 0.32
SRRT-217ENST00000618411 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
SRRT-217ENST00000618411 LRRC10BA6NIK2 292 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
SRRT-217ENST00000618411 NTRK3Q16288 839 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 SH3GL2Q99962 352 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
SRRT-217ENST00000618411 SEC31BQ9NQW1 1179 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 EPN1Q9Y6I3 576 aaPredicted RBP17.04■□□□□ 0.32
SRRT-217ENST00000618411 TNRQ92752 1358 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 CASP7P55210 303 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 RILPL1Q5EBL4 403 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 KLHL10Q6JEL2 608 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 B4GALNT4Q76KP1 1039 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 GUCA1BQ9UMX6 200 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
SRRT-217ENST00000618411 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
SRRT-217ENST00000618411 SIPA1L3O60292 1781 aaPredicted RBP17.04■□□□□ 0.32
SRRT-217ENST00000618411 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
SRRT-217ENST00000618411 GOLGA8KD6RF30 607 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 CD44P16070 742 aaKnown RBP17.03■□□□□ 0.32
SRRT-217ENST00000618411 STX17P56962 302 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 DDR1Q08345 913 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 STAG1Q8WVM7 1258 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 CABS1Q96KC9 395 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 SH2B2O14492 632 aaPredicted RBP17.03■□□□□ 0.32
SRRT-217ENST00000618411 NDUFA10O95299 355 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 LTKP29376 864 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
SRRT-217ENST00000618411 SPATS2Q86XZ4 545 aaKnown RBP17.03■□□□□ 0.32
SRRT-217ENST00000618411 NUP88Q99567 741 aaPredicted RBP17.03■□□□□ 0.32
SRRT-217ENST00000618411 LIMA1Q9UHB6 759 aaKnown RBP17.03■□□□□ 0.32
SRRT-217ENST00000618411 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
SRRT-217ENST00000618411 UBN2Q6ZU65 1347 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms