RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF444Q8N0Y2 327 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-208ENST00000618395 RAPGEF1Q13905 1077 aa16.57■□□□□ 0.24
COL5A1-208ENST00000618395 PACSIN2Q9UNF0 486 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-208ENST00000618395 KRT8P05787 483 aa16.57■□□□□ 0.24
COL5A1-208ENST00000618395 FAM186BQ8IYM0 893 aa16.57■□□□□ 0.24
COL5A1-208ENST00000618395 ZKSCAN3Q9BRR0 538 aa16.57■□□□□ 0.24
COL5A1-208ENST00000618395 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-208ENST00000618395 CCDC151A5D8V7 595 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 MYL6BP14649 208 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 TRPC1P48995 793 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 RBM5P52756 815 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL5A1-208ENST00000618395 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-208ENST00000618395 ARIH1Q9Y4X5 557 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-208ENST00000618395 TADA3O75528 432 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 AFG3L2Q9Y4W6 797 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 KRT4P19013 534 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 LONRF2Q1L5Z9 754 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 ZNF229Q9UJW7 825 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 TRIM75PA6NK02 468 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 THAP12O43422 761 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 SNX1Q13596 522 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 ASIC2Q16515 512 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 COQ7Q99807 217 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 RCN2Q14257 317 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 FGFR1OP2Q9NVK5 253 aa16.56■□□□□ 0.24
COL5A1-208ENST00000618395 TTC41PQ6P2S7 1318 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 DDIT3P35638 169 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 HAUS7Q99871 368 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 SDSP20132 328 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 IQUBQ8NA54 791 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 MAIP1Q8WWC4 291 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 STXBP3O00186 592 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 ZBTB43O43298 467 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 MRPL28Q13084 256 aaKnown RBP16.55■□□□□ 0.24
COL5A1-208ENST00000618395 WDR75Q8IWA0 830 aaKnown RBP16.55■□□□□ 0.24
COL5A1-208ENST00000618395 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
COL5A1-208ENST00000618395 PTPRCP08575 1304 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 MTX1Q13505 466 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 DAB1O75553 588 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 IGHDP01880 384 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 KRT14P02533 472 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 JADE1Q6IE81 842 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 TRIM55Q9BYV6 548 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 STOML1Q9UBI4 398 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 RPL13P26373 211 aaKnown RBP16.55■□□□□ 0.24
COL5A1-208ENST00000618395 ETF1P62495 437 aaKnown RBP16.55■□□□□ 0.24
COL5A1-208ENST00000618395 TMTC2Q8N394 836 aa16.55■□□□□ 0.24
COL5A1-208ENST00000618395 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
COL5A1-208ENST00000618395 VPS16Q9H269 839 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
COL5A1-208ENST00000618395 ENO4A6NNW6 628 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 RUNDC3BQ96NL0 473 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 ATP5HO75947 161 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 TRIM27P14373 513 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 HDAC4P56524 1084 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 CASC4Q6P4E1 433 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
COL5A1-208ENST00000618395 SERPINI1Q99574 410 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 OSBPL1AQ9BXW6 950 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 KRT7P08729 469 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 GCFC2P16383 781 aaKnown RBP16.54■□□□□ 0.24
COL5A1-208ENST00000618395 SERPINB10P48595 397 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 GRAMD1BQ3KR37 738 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 MCF2L2Q86YR7 1114 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 CCDC51Q96ER9 411 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 STAMBPL1Q96FJ0 436 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 C10orf88Q9H8K7 445 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 TBC1D23Q9NUY8 699 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 G3BP2Q9UN86 482 aaKnown RBP16.54■□□□□ 0.24
COL5A1-208ENST00000618395 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
COL5A1-208ENST00000618395 DDX42Q86XP3 938 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL5A1-208ENST00000618395 VPS37BQ9H9H4 285 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 ABCC11Q96J66 1382 aa16.54■□□□□ 0.24
COL5A1-208ENST00000618395 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 ESRRBO95718 433 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
COL5A1-208ENST00000618395 METTL24Q5JXM2 366 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 ZGPATQ8N5A5 531 aaKnown RBP16.53■□□□□ 0.24
COL5A1-208ENST00000618395 IFT122Q9HBG6 1241 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 INTUQ9ULD6 942 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 KRT9P35527 623 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 FLOT2Q14254 428 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 TMOD2Q9NZR1 351 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 CLSTN2Q9H4D0 955 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 UBAP1Q9NZ09 502 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 Q6ZUG5 572 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 TLK2Q86UE8 772 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 TTLL11Q8NHH1 800 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 BRF1Q92994 677 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 MPHOSPH6Q99547 160 aaKnown RBP16.53■□□□□ 0.24
COL5A1-208ENST00000618395 SPAG7O75391 227 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 FAM212AQ96EL1 285 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 ESYT1Q9BSJ8 1104 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 ECHDC1Q9NTX5 307 aa16.53■□□□□ 0.24
COL5A1-208ENST00000618395 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms