RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 NAPGQ99747 312 aaPredicted RBP12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 C10orf67Q8IYJ2 551 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 IWS1Q96ST2 819 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 GNA14O95837 355 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 ADCY7P51828 1080 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 KDM3AQ9Y4C1 1321 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 KRT19P08727 400 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 PPP2R3AQ06190 1150 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 CSGALNACT2Q8N6G5 542 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 PDE8AO60658 829 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 PAK1Q13153 545 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 USH1GQ495M9 461 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 MCUR1Q96AQ8 359 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 PFDN6O15212 129 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 HPDP32754 393 aaPredicted RBP12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 TNFAIP1Q13829 316 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 UTP14CQ5TAP6 766 aaKnown RBP12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 MIPOL1Q8TD10 442 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 HAUS1Q96CS2 278 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 KIF22Q14807 665 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 MAIP1Q8WWC4 291 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 CSADQ9Y600 493 aa12.39□□□□□ -0.43
CCDC144B-208ENST00000618081 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 NUCKS1Q9H1E3 243 aaKnown RBP12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 ASIC3Q9UHC3 531 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 BCAP29Q9UHQ4 241 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 AATFQ9NY61 560 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 PIK3AP1Q6ZUJ8 805 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 PARP2Q9UGN5 583 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 OATP04181 439 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 RPS6KB1P23443 525 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 MROH5Q6ZUA9 1318 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 H7C1D1 291 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 DENND2CQ68D51 928 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 CEP85Q6P2H3 762 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 SH3TC1Q8TE82 1336 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 RUFY4Q6ZNE9 571 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 PPP4R1Q8TF05 950 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 AS3MTQ9HBK9 375 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 CCDC87Q9NVE4 849 aa12.38□□□□□ -0.43
CCDC144B-208ENST00000618081 HS1BP3Q53T59 392 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 KRT25Q7Z3Z0 450 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 IQCDQ96DY2 449 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 CCDC170Q8IYT3 715 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 B4E1Z4 1266 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 ZNF131P52739 623 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 RPS6KA2Q15349 733 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 MAEAQ7L5Y9 396 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 ARHGEF2Q92974 986 aaKnown RBP12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 GBP7Q8N8V2 638 aaPredicted RBP12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 HVCN1Q96D96 273 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 RBSNQ9H1K0 784 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 ASXL2Q76L83 1435 aa12.37□□□□□ -0.43
CCDC144B-208ENST00000618081 TBC1D8O95759 1140 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 GNPTABQ3T906 1256 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 RSAD2Q8WXG1 361 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 CUTAO60888 179 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 KRT81Q14533 505 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 TXKP42681 527 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 MCTP2Q6DN12 878 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 C11orf95C9JLR9 678 aaPredicted RBP12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 ATF7P17544 494 aaPredicted RBP12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 TNNI1P19237 187 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 SYT10Q6XYQ8 523 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 PHBP35232 272 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 RASSF2P50749 326 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 HHATQ5VTY9 493 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 VPS16Q9H269 839 aa12.36□□□□□ -0.43
CCDC144B-208ENST00000618081 TTC38Q5R3I4 469 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms