RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SFMBT2Q5VUG0 894 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 CHAMP1Q96JM3 812 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 HOMER3Q9NSC5 361 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
CLTCL1-209ENST00000617103 GUCY2FP51841 1108 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 NDC80O14777 642 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 HSPA1LP34931 641 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 CCDC14Q49A88 953 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 NBPF14Q5TI25 921 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 ANKRD20A3Q5VUR7 823 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 SDCCAG8Q86SQ7 713 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 CCDC170Q8IYT3 715 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 CACTINQ8WUQ7 758 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 DSCC1Q9BVC3 393 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 FAM204AQ9H8W3 233 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 FAM184BQ9ULE4 1060 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 TPCN1Q9ULQ1 816 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 PABPN1LA6NDY0 278 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 PLCG2P16885 1265 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 ARL1P40616 181 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 MRPL12P52815 198 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 RRAGAQ7L523 313 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 C2CD5Q86YS7 1000 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 CTTNBP2NLQ9P2B4 639 aa11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-209ENST00000617103 CASQ2O14958 399 aaPredicted RBP11.83□□□□□ -0.51
CLTCL1-209ENST00000617103 ZNF853P0CG23 659 aa11.83□□□□□ -0.51
CLTCL1-209ENST00000617103 IL13P35225 146 aa11.83□□□□□ -0.51
CLTCL1-209ENST00000617103 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.51
CLTCL1-209ENST00000617103 EXOC4Q96A65 974 aa11.83□□□□□ -0.51
CLTCL1-209ENST00000617103 PSMD1Q99460 953 aa11.83□□□□□ -0.51
CLTCL1-209ENST00000617103 SSX2IPQ9Y2D8 614 aa11.83□□□□□ -0.51
CLTCL1-209ENST00000617103 E7EWF7 191 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 PARP1P09874 1014 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 SH3BGRP55822 239 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 CCDC105Q8IYK2 499 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 RPUSD2Q8IZ73 545 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 FAM207AQ9NSI2 230 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 KLHL14Q9P2G3 628 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 PPP1R1BQ9UD71 204 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 STK38LQ9Y2H1 464 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 A0A087WUV0 522 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 IRS4O14654 1257 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 SF3A3Q12874 501 aaKnown RBP eCLIP11.83□□□□□ -0.523e-8■■■■■ 54.4
CLTCL1-209ENST00000617103 PPP2R5EQ16537 467 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 KLHDC4Q8TBB5 520 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 STAMQ92783 540 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 GBP5Q96PP8 586 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 CCDC151A5D8V7 595 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 KRT15P19012 456 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 STX2P32856 288 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 DNM2P50570 870 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 NBPF5PQ86XG9 351 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 TBC1D31Q96DN5 1066 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 RAB3IPQ96QF0 476 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 PCDHA7Q9UN72 937 aa11.83□□□□□ -0.52
CLTCL1-209ENST00000617103 KCNJ18B7U540 433 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 CALUO43852 315 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 PFKFB2O60825 505 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 KCNJ12Q14500 433 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 SNCBQ16143 134 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 WDR78Q5VTH9 848 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 PHLDB3Q6NSJ2 640 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 MRRFQ96E11 262 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 VEZTQ9HBM0 779 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 FAM114A2Q9NRY5 505 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 KCNJ14Q9UNX9 436 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 PHLPP2Q6ZVD8 1323 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 FANCAO15360 1455 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 A0A1W2PQD8 194 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 SETSIPP0DME0 302 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 TXKP42681 527 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 AP1ARQ63HQ0 302 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 HAUS3Q68CZ6 603 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 RPAINQ86UA6 219 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 LRWD1Q9UFC0 647 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 USP19O94966 1318 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 ATP5JP18859 108 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 PTH1RQ03431 593 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 PLS1Q14651 629 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 MUM1Q2TAK8 710 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 CEP120Q8N960 986 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 MAK16Q9BXY0 300 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 EPN1Q9Y6I3 576 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-209ENST00000617103 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms