RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 C8orf74Q6P047 294 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 ILDR1Q86SU0 546 aaPredicted RBP17.57■□□□□ 0.4
SYNRG-223ENST00000616179 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.57■□□□□ 0.4
SYNRG-223ENST00000616179 HELLSQ9NRZ9 838 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 CRB1P82279 1406 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 ZNF185O15231 689 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 TACC1O75410 805 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
SYNRG-223ENST00000616179 ZNF174Q15697 407 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 HNRNPLLQ8WVV9 542 aaKnown RBP17.57■□□□□ 0.4
SYNRG-223ENST00000616179 KCNB2Q92953 911 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 CDK12Q9NYV4 1490 aaPredicted RBP17.57■□□□□ 0.4
SYNRG-223ENST00000616179 GLI2P10070 1586 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 MFAP3LO75121 409 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 ENOX1Q8TC92 643 aaKnown RBP17.57■□□□□ 0.4
SYNRG-223ENST00000616179 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
SYNRG-223ENST00000616179 FGAP02671 866 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 PLCD1P51178 756 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 IFFO1Q0D2I5 559 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 EPHA10Q5JZY3 1008 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 ARHGEF25Q86VW2 580 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 CCDC47Q96A33 483 aaKnown RBP17.56■□□□□ 0.4
SYNRG-223ENST00000616179 HPCAL4Q9UM19 191 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 SHROOM2Q13796 1616 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 A1BGP04217 495 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 PANX2Q96RD6 677 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 BACH1O14867 736 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 PPP1R12BO60237 982 aaPredicted RBP17.56■□□□□ 0.4
SYNRG-223ENST00000616179 FXR1P51114 621 aaKnown RBP eCLIP17.56■□□□□ 0.4
SYNRG-223ENST00000616179 SPATA1Q5VX52 437 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 IQUBQ8NA54 791 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 IL17RAQ96F46 866 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 NAPBQ9H115 298 aa17.56■□□□□ 0.4
SYNRG-223ENST00000616179 MINDY4BA8MYZ0 360 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 TET3O43151 1660 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 ATP1A1P05023 1023 aaKnown RBP17.55■□□□□ 0.4
SYNRG-223ENST00000616179 TACO1Q9BSH4 297 aaKnown RBP17.55■□□□□ 0.4
SYNRG-223ENST00000616179 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
SYNRG-223ENST00000616179 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 SMIM23A6NLE4 172 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 ABL1P00519 1130 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 HOXC9P31274 260 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 ALS2CR12Q96Q35 445 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 DSCC1Q9BVC3 393 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 ZBTB3Q9H5J0 574 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 RIPOR2Q9Y4F9 1068 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 TRIM75PA6NK02 468 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 KIF4AO95239 1232 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 USP14P54578 494 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 PPARAQ07869 468 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 CNPY4Q8N129 248 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 MICAL1Q8TDZ2 1067 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
SYNRG-223ENST00000616179 CHP1Q99653 195 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 ATG3Q9NT62 314 aa17.55■□□□□ 0.4
SYNRG-223ENST00000616179 GUCY1A3Q02108 690 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 NNTQ13423 1086 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 BIRC2Q13490 618 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 RSRC1Q96IZ7 334 aaKnown RBP17.54■□□□□ 0.4
SYNRG-223ENST00000616179 GOPCQ9HD26 462 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 CHUKO15111 745 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 BUB1BO60566 1050 aaPredicted RBP17.54■□□□□ 0.4
SYNRG-223ENST00000616179 PTPROQ16827 1216 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 IQCA1Q86XH1 822 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 HAUS7Q99871 368 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.54■□□□□ 0.4
SYNRG-223ENST00000616179 EIF4E1BA6NMX2 242 aaKnown RBP17.54■□□□□ 0.4
SYNRG-223ENST00000616179 BRD2P25440 801 aaKnown RBP17.54■□□□□ 0.4
SYNRG-223ENST00000616179 OR8K1Q8NGG5 319 aa17.54■□□□□ 0.4
SYNRG-223ENST00000616179 ARID5AQ03989 594 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 SPAG1Q07617 926 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 NR5A1Q13285 461 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 GCKRQ14397 625 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 CCDC40Q4G0X9 1142 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 CACNA2D4Q7Z3S7 1137 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.53■□□□□ 0.4
SYNRG-223ENST00000616179 GOLGA8KD6RF30 607 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 SNCBQ16143 134 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
SYNRG-223ENST00000616179 INTS13Q9NVM9 706 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 CSRNP2Q9H175 543 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 ALDH8A1Q9H2A2 487 aaPredicted RBP17.53■□□□□ 0.4
SYNRG-223ENST00000616179 MMRN2Q9H8L6 949 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 MAST3O60307 1309 aa17.53■□□□□ 0.4
SYNRG-223ENST00000616179 FAM170AA1A519 330 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 NDUFA10O95299 355 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
SYNRG-223ENST00000616179 NBPF14Q5TI25 921 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 MSANTD4Q8NCY6 345 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 DONSONQ9NYP3 566 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 M0R2C6 588 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 RTN1Q16799 776 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 TSGA10IPQ3SY00 556 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 HAUS4Q9H6D7 363 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
SYNRG-223ENST00000616179 PRR36Q9H6K5 1346 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms