RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CTAGE15A4D2H0 777 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 CTAGE8P0CG41 777 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 TYRO3Q06418 890 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 CTAGE4Q8IX94 777 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 MIGA1Q8NAN2 632 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 DHX58Q96C10 678 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 BCAP29Q9UHQ4 241 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 FAM160A1Q05DH4 1040 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 PDE4DQ08499 809 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 CAPZA3Q96KX2 299 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
TCF4-248ENST00000616053 PHBP35232 272 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 UBXN1Q04323 297 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 TRAF5O00463 557 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 SMARCA5O60264 1052 aaPredicted RBP13.99□□□□□ -0.17
TCF4-248ENST00000616053 TNNC2P02585 160 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 ANXA13P27216 316 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 ATP11AP98196 1134 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 ANGPTL8Q6UXH0 198 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 MCUQ8NE86 351 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 COG4Q9H9E3 785 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 SEC24BO95487 1268 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 FBXW10Q5XX13 1052 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 FAM180AQ6UWF9 173 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 FAM186BQ8IYM0 893 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 TMC2Q8TDI7 906 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 TLR3O15455 904 aaKnown RBP13.98□□□□□ -0.17
TCF4-248ENST00000616053 GNAT2P19087 354 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 OSBPP22059 807 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 TNNC1P63316 161 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 SV2BQ7L1I2 683 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
TCF4-248ENST00000616053 ZNF654Q8IZM8 581 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 RSAD2Q8WXG1 361 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 PRDM5Q9NQX1 630 aaPredicted RBP13.98□□□□□ -0.17
TCF4-248ENST00000616053 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
TCF4-248ENST00000616053 ESRRBO95718 433 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 ZNF75DP51815 510 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 MX2P20592 715 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 NCAPH2Q6IBW4 605 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 ABHD8Q96I13 439 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 RIC8AQ9NPQ8 531 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 ORC6Q9Y5N6 252 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
TCF4-248ENST00000616053 ARHGAP4P98171 946 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 TESPA1A2RU30 521 aaPredicted RBP13.98□□□□□ -0.17
TCF4-248ENST00000616053 CCDC93Q567U6 631 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 SLC9C2Q5TAH2 1124 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 ARMC9Q7Z3E5 817 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 MAGEB6Q8N7X4 407 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 SPDL1Q96EA4 605 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 KCNG1Q9UIX4 513 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 CLCA2Q9UQC9 943 aa13.98□□□□□ -0.17
TCF4-248ENST00000616053 ECE1P42892 770 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 HHATQ5VTY9 493 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 HAUS1Q96CS2 278 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 CCDC124Q96CT7 223 aaKnown RBP13.97□□□□□ -0.17
TCF4-248ENST00000616053 PPP1R9AQ9ULJ8 1098 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 NEMFO60524 1076 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 DBN1Q16643 649 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 XPOTO43592 962 aaKnown RBP13.97□□□□□ -0.17
TCF4-248ENST00000616053 TRIML1Q8N9V2 468 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 C16orf45Q96MC5 204 aaPredicted RBP13.97□□□□□ -0.17
TCF4-248ENST00000616053 GNGT2O14610 69 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 HMGB3O15347 200 aaKnown RBP13.97□□□□□ -0.17
TCF4-248ENST00000616053 LETM2Q2VYF4 491 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
TCF4-248ENST00000616053 TRIM75PA6NK02 468 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 CFBP00751 764 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 TADA2BQ86TJ2 420 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.97□□□□□ -0.17
TCF4-248ENST00000616053 SUGCTQ9HAC7 445 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 DDX19AQ9NUU7 478 aaKnown RBP13.97□□□□□ -0.17
TCF4-248ENST00000616053 PARP2Q9UGN5 583 aa13.97□□□□□ -0.17
TCF4-248ENST00000616053 MKRN3Q13064 507 aaKnown RBP13.96□□□□□ -0.17
TCF4-248ENST00000616053 PPP1R12CQ9BZL4 782 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 EFCAB13Q8IY85 973 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 CTAGE9A4FU28 777 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 RAPGEF3O95398 923 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 ARHGAP24Q8N264 748 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 CAPN15O75808 1086 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 ASIC3Q9UHC3 531 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 ZNF263O14978 683 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 MTIF3Q9H2K0 278 aaKnown RBP13.96□□□□□ -0.17
TCF4-248ENST00000616053 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
TCF4-248ENST00000616053 SLC1A4P43007 532 aa13.96□□□□□ -0.18
TCF4-248ENST00000616053 MMEL1Q495T6 779 aa13.96□□□□□ -0.18
TCF4-248ENST00000616053 HERC4Q5GLZ8 1057 aaPredicted RBP13.96□□□□□ -0.18
TCF4-248ENST00000616053 WDR7Q9Y4E6 1490 aa13.96□□□□□ -0.18
TCF4-248ENST00000616053 SUPT3HB4E1H0 165 aa13.96□□□□□ -0.18
TCF4-248ENST00000616053 NNMTP40261 264 aa13.96□□□□□ -0.18
TCF4-248ENST00000616053 ACTN4O43707 911 aaKnown RBP13.95□□□□□ -0.18
TCF4-248ENST00000616053 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 ZNF513Q8N8E2 541 aaPredicted RBP13.95□□□□□ -0.18
TCF4-248ENST00000616053 RGL1Q9NZL6 768 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 APOA4P06727 396 aa13.95□□□□□ -0.18
TCF4-248ENST00000616053 ZBTB41Q5SVQ8 909 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms