RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	PPFIA1	Q13136	1202 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	DHX58	Q96C10	678 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	ABT1	Q9ULW3	272 aa	Known RBP	13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	DUOX2	Q9NRD8	1548 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	ODR4	Q5SWX8	454 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	TRAF5	O00463	557 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	SLC1A4	P43007	532 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	SAP30BP	Q9UHR5	308 aa	Known RBP	13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	CPSF3	Q9UKF6	684 aa	Known RBP	13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293		F6X3S4	739 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	GSTA1	P08263	222 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	GSTA2	P09210	222 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	ZNF233	A6NK53	670 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	ARHGEF12	Q9NZN5	1544 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	KDM5A	P29375	1690 aa	Known RBP	13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	ASIC2	Q16515	512 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	SYCE1	Q8N0S2	351 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	CHURC1	Q8WUH1	139 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	SMIM23	A6NLE4	172 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	APBA3	O96018	575 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	GANC	Q8TET4	914 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	PPIP5K2	O43314	1243 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	IRX5	P78411	483 aa	Predicted RBP	13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	TRIM14	Q14142	442 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	POTED	Q86YR6	584 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	DEPTOR	Q8TB45	409 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	RSAD2	Q8WXG1	361 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	LUC7L2	Q9Y383	392 aa	Known RBP	13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	WDR17	Q8IZU2	1322 aa		13.49	□□□□□ -0.25
ABCA2-223	ENST00000614293	SRGAP2B	P0DMP2	458 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	HSPA8	P11142	646 aa	Known RBP	13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	BRAP	Q7Z569	592 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	DPP9	Q86TI2	863 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	XAGE3	Q8WTP9	111 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	NDUFAF2	Q8N183	169 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	PLCB1	Q9NQ66	1216 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	RTL1	A6NKG5	1358 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	NME9	Q86XW9	330 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	RYBP	Q8N488	228 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	MAPKBP1	O60336	1514 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	PLCH2	O75038	1416 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	FAM160B1	Q5W0V3	765 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	MRPS27	Q92552	414 aa	Known RBP	13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	PHB	P35232	272 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	PSMD6	Q15008	389 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	EFCAB13	Q8IY85	973 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.48	□□□□□ -0.25	2e-15	■■□□□ 14.4
ABCA2-223	ENST00000614293	N4BP2L2	Q92802	583 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	ARMC9	Q7Z3E5	817 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	MBIP	Q9NS73	344 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	HIBADH	P31937	336 aa	Known RBP	13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	ARHGAP4	P98171	946 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	TAF11	Q15544	211 aa		13.48	□□□□□ -0.25
ABCA2-223	ENST00000614293	MAN1A1	P33908	653 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	PDE4D	Q08499	809 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	MRPL44	Q9H9J2	332 aa	Known RBP	13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	TFIP11	Q9UBB9	837 aa	Known RBP	13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	RABGAP1	Q9Y3P9	1069 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	PAGR1	Q9BTK6	254 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	SLC13A4	Q9UKG4	626 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	TSTA3	Q13630	321 aa	Predicted RBP	13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	TLR3	O15455	904 aa	Known RBP	13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	SLC7A5P2	Q9GIP4	190 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	ZKSCAN5	Q9Y2L8	839 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	TNNI1	P19237	187 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	NAA25	Q14CX7	972 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	CHPF2	Q9P2E5	772 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	GCNT3	O95395	438 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	ERCC3	P19447	782 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	PRKG1	Q13976	671 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	PUM3	Q15397	648 aa	Known RBP	13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293		Q6ZUG5	572 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	P3H4	Q92791	437 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	NUP58	Q9BVL2	599 aa		13.47	□□□□□ -0.25
ABCA2-223	ENST00000614293	GIGYF1	O75420	1035 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	ALDH1L1	O75891	902 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	ZSCAN20	P17040	1043 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	ZBED2	Q9BTP6	218 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	DNMT1	P26358	1616 aa	Known RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	KDM3A	Q9Y4C1	1321 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	PPARG	P37231	505 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	LETM2	Q2VYF4	491 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	RINT1	Q6NUQ1	792 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	MYCT1	Q8N699	235 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	MYCBP	Q99417	103 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	ORC6	Q9Y5N6	252 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	PPFIA4	O75335	1185 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	CD19	P15391	556 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	ABCD1	P33897	745 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	FASTKD5	Q7L8L6	764 aa	Known RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	CPXCR1	Q8N123	301 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	CCDC124	Q96CT7	223 aa	Known RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	PARP2	Q9UGN5	583 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	BCS1L	Q9Y276	419 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	KIF1B	O60333	1816 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	CAPN2	P17655	700 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	ELF1	P32519	619 aa		13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	ZYX	Q15942	572 aa	Known RBP	13.46	□□□□□ -0.25
ABCA2-223	ENST00000614293	COPS6	Q7L5N1	327 aa		13.46	□□□□□ -0.26
ABCA2-223	ENST00000614293	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.46	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms