RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 SHROOM1Q2M3G4 852 aaPredicted RBP15.29■□□□□ 0.04
CCL4-201ENST00000613947 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 OTUD5Q96G74 571 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.29■□□□□ 0.04
CCL4-201ENST00000613947 GDF11O95390 407 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 ZBTB48P10074 688 aaPredicted RBP15.29■□□□□ 0.04
CCL4-201ENST00000613947 PTPRAP18433 802 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 MAP2K2P36507 400 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 KIF23Q02241 960 aaPredicted RBP15.29■□□□□ 0.04
CCL4-201ENST00000613947 ALX1Q15699 326 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
CCL4-201ENST00000613947 CDK8P49336 464 aa15.28■□□□□ 0.04
CCL4-201ENST00000613947 CERKLQ49MI3 558 aaPredicted RBP15.28■□□□□ 0.04
CCL4-201ENST00000613947 C16orf86Q6ZW13 317 aa15.28■□□□□ 0.04
CCL4-201ENST00000613947 CCDC84Q86UT8 332 aaPredicted RBP15.28■□□□□ 0.04
CCL4-201ENST00000613947 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
CCL4-201ENST00000613947 IRF6O14896 467 aa15.27■□□□□ 0.04
CCL4-201ENST00000613947 SGSM2O43147 1006 aa15.27■□□□□ 0.04
CCL4-201ENST00000613947 PPATQ06203 517 aa15.27■□□□□ 0.04
CCL4-201ENST00000613947 JMYQ8N9B5 988 aa15.27■□□□□ 0.04
CCL4-201ENST00000613947 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.04
CCL4-201ENST00000613947 RAD50Q92878 1312 aa15.27■□□□□ 0.03
CCL4-201ENST00000613947 GH2P01242 217 aa15.26■□□□□ 0.03
CCL4-201ENST00000613947 PPARAQ07869 468 aa15.26■□□□□ 0.03
CCL4-201ENST00000613947 PPIL2Q13356 520 aa15.26■□□□□ 0.03
CCL4-201ENST00000613947 TAOK2Q9UL54 1235 aa15.26■□□□□ 0.03
CCL4-201ENST00000613947 ASNSP08243 561 aa15.26■□□□□ 0.03
CCL4-201ENST00000613947 DSCC1Q9BVC3 393 aa15.26■□□□□ 0.03
CCL4-201ENST00000613947 ZBTB21Q9ULJ3 1066 aa15.26■□□□□ 0.03
CCL4-201ENST00000613947 ROBO3Q96MS0 1386 aa15.25■□□□□ 0.03
CCL4-201ENST00000613947 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
CCL4-201ENST00000613947 MS4A4AQ96JQ5 239 aa15.25■□□□□ 0.03
CCL4-201ENST00000613947 ESYT1Q9BSJ8 1104 aa15.25■□□□□ 0.03
CCL4-201ENST00000613947 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
CCL4-201ENST00000613947 DOCK1Q14185 1865 aa15.25■□□□□ 0.03
CCL4-201ENST00000613947 ZMYM6O95789 1325 aa15.25■□□□□ 0.03
CCL4-201ENST00000613947 USP17L5A8MUK1 530 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 CDC45O75419 566 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 PRDM1O75626 825 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 AKR1B1P15121 316 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 SLC4A3P48751 1232 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 PTH1RQ03431 593 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 CTDSPL2Q05D32 466 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 BECN1Q14457 450 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 INCENPQ9NQS7 918 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 GINM1Q9NU53 330 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 ANAPC4Q9UJX5 808 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 ATAD5Q96QE3 1844 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
CCL4-201ENST00000613947 MPHOSPH10O00566 681 aaKnown RBP15.24■□□□□ 0.03
CCL4-201ENST00000613947 EIF5BO60841 1220 aaKnown RBP15.24■□□□□ 0.03
CCL4-201ENST00000613947 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
CCL4-201ENST00000613947 GTF2A2P52657 109 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 HAND2P61296 217 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 RAB3GAP1Q15042 981 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 CABP5Q9NP86 173 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 TACC3Q9Y6A5 838 aa15.24■□□□□ 0.03
CCL4-201ENST00000613947 THSD7BQ9C0I4 1608 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 RASA1P20936 1047 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 TM4SF4P48230 202 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
CCL4-201ENST00000613947 SPP2Q13103 211 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 SNAPC2Q13487 334 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 ZNF280CQ8ND82 737 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 PTPN18Q99952 460 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 LAMB1P07942 1786 aa15.23■□□□□ 0.03
CCL4-201ENST00000613947 MYH8P13535 1937 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 CCL15-CCL14A0A0B4J2E2 113 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 CXCL11O14625 94 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 INHBEP58166 350 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 PDE4BQ07343 736 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 SREBF2Q12772 1141 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 SEPT2Q15019 361 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 CCL15Q16663 113 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 CASC1Q6TDU7 716 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 REM2Q8IYK8 340 aaPredicted RBP15.22■□□□□ 0.03
CCL4-201ENST00000613947 BRI3BPQ8WY22 251 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 CCDC17Q96LX7 622 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 ZNF287Q9HBT7 754 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 PHIPQ8WWQ0 1821 aa15.22■□□□□ 0.03
CCL4-201ENST00000613947 TESPA1A2RU30 521 aaPredicted RBP15.21■□□□□ 0.03
CCL4-201ENST00000613947 ZNF213O14771 459 aa15.21■□□□□ 0.03
CCL4-201ENST00000613947 ZNF444Q8N0Y2 327 aaPredicted RBP15.21■□□□□ 0.03
CCL4-201ENST00000613947 WDR18Q9BV38 432 aa15.21■□□□□ 0.03
CCL4-201ENST00000613947 CTNNA3Q9UI47 895 aa15.21■□□□□ 0.03
CCL4-201ENST00000613947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCL4-201ENST00000613947 IGF2BP3O00425 579 aaKnown RBP eCLIP15.21■□□□□ 0.02
CCL4-201ENST00000613947 FGRP09769 529 aa15.21■□□□□ 0.02
CCL4-201ENST00000613947 CETPP11597 493 aa15.21■□□□□ 0.02
CCL4-201ENST00000613947 GLIPR1L2Q4G1C9 344 aa15.21■□□□□ 0.02
CCL4-201ENST00000613947 KIAA1211Q6ZU35 1233 aa15.21■□□□□ 0.02
CCL4-201ENST00000613947 TMEM179Q6ZVK1 233 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms