RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
SRSF3-204ENST00000613941 ZNF576Q9H609 170 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 LRRC37A2A6NM11 1700 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
SRSF3-204ENST00000613941 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
SRSF3-204ENST00000613941 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
SRSF3-204ENST00000613941 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
SRSF3-204ENST00000613941 SLC4A10Q6U841 1118 aa13.17□□□□□ -0.3
SRSF3-204ENST00000613941 TRPV1Q8NER1 839 aa13.17□□□□□ -0.3
SRSF3-204ENST00000613941 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
SRSF3-204ENST00000613941 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
SRSF3-204ENST00000613941 PRDM12Q9H4Q4 367 aa13.17□□□□□ -0.3
SRSF3-204ENST00000613941 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
SRSF3-204ENST00000613941 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
SRSF3-204ENST00000613941 GAKO14976 1311 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 MYH1P12882 1939 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 SLC5A1P13866 664 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 CYP2C19P33261 490 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 BTDP43251 543 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 IL27Q8NEV9 243 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 C1QTNF1Q9BXJ1 281 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 HCN4Q9Y3Q4 1203 aa13.16□□□□□ -0.3
SRSF3-204ENST00000613941 PIEZO1Q92508 2521 aa13.15□□□□□ -0.3
SRSF3-204ENST00000613941 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
SRSF3-204ENST00000613941 CAP2P40123 477 aa13.15□□□□□ -0.3
SRSF3-204ENST00000613941 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
SRSF3-204ENST00000613941 TIFAQ96CG3 184 aa13.15□□□□□ -0.3
SRSF3-204ENST00000613941 EDC3Q96F86 508 aaKnown RBP13.15□□□□□ -0.3
SRSF3-204ENST00000613941 LRFN3Q9BTN0 628 aa13.15□□□□□ -0.3
SRSF3-204ENST00000613941 UTYO14607 1347 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 SALL1Q9NSC2 1324 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 TBC1D12O60347 775 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 MSCO60682 206 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 ALDH1L1O75891 902 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
SRSF3-204ENST00000613941 PBX2P40425 430 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 SNX17Q15036 470 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 SHROOM1Q2M3G4 852 aaPredicted RBP13.14□□□□□ -0.31
SRSF3-204ENST00000613941 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
SRSF3-204ENST00000613941 DZIP1Q86YF9 867 aaKnown RBP13.14□□□□□ -0.31
SRSF3-204ENST00000613941 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 SRCIN1Q9C0H9 1055 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 TMOD4Q9NZQ9 345 aa13.14□□□□□ -0.31
SRSF3-204ENST00000613941 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
SRSF3-204ENST00000613941 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.13□□□□□ -0.31
SRSF3-204ENST00000613941 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.13□□□□□ -0.31
SRSF3-204ENST00000613941 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 VAMP4O75379 141 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 CYBAP13498 195 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 PHKA1P46020 1223 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 BACE1P56817 501 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 TLE2Q04725 743 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 ADGRE1Q14246 886 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 ALYREFQ86V81 257 aaKnown RBP13.13□□□□□ -0.31
SRSF3-204ENST00000613941 LPIN2Q92539 896 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 TBC1D2Q9BYX2 928 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 EPHX3Q9H6B9 360 aa13.13□□□□□ -0.31
SRSF3-204ENST00000613941 PARP14Q460N5 1801 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 CNMDO75829 334 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 IGFBP4P22692 258 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 RHBDL3P58872 404 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 JAG1P78504 1218 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 ABCF2Q9UG63 623 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
SRSF3-204ENST00000613941 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
SRSF3-204ENST00000613941 A0A0G2JMZ2 1700 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 CLTBP09497 229 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 RAG1P15918 1043 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 TFF2Q03403 129 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 FPGSQ05932 587 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 EXOSC9Q06265 439 aaKnown RBP13.11□□□□□ -0.31
SRSF3-204ENST00000613941 CCDC129Q6ZRS4 1044 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
SRSF3-204ENST00000613941 TRANK1O15050 2925 aa13.1□□□□□ -0.31
SRSF3-204ENST00000613941 PTPREP23469 700 aa13.1□□□□□ -0.31
SRSF3-204ENST00000613941 KCNQ1P51787 676 aa13.1□□□□□ -0.31
SRSF3-204ENST00000613941 ATP2B3Q16720 1220 aa13.1□□□□□ -0.31
SRSF3-204ENST00000613941 MICALL1Q8N3F8 863 aa13.1□□□□□ -0.31
SRSF3-204ENST00000613941 WDR18Q9BV38 432 aa13.1□□□□□ -0.31
SRSF3-204ENST00000613941 GNL3LQ9NVN8 582 aaKnown RBP13.1□□□□□ -0.31
SRSF3-204ENST00000613941 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
SRSF3-204ENST00000613941 FAM86C2PA6NEL3 165 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 SLC15A5A6NIM6 579 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 EYA2O00167 538 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms