RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 IQCA1Q86XH1 822 aa23.8■■□□□ 1.4
CPNE9-205ENST00000613455 ZSCAN29Q8IWY8 852 aaPredicted RBP23.8■■□□□ 1.4
CPNE9-205ENST00000613455 ENAHQ8N8S7 591 aaPredicted RBP23.8■■□□□ 1.4
CPNE9-205ENST00000613455 TRPM4Q8TD43 1214 aa23.8■■□□□ 1.4
CPNE9-205ENST00000613455 GTF3C6Q969F1 213 aa23.8■■□□□ 1.4
CPNE9-205ENST00000613455 PI4KBQ9UBF8 816 aa23.8■■□□□ 1.4
CPNE9-205ENST00000613455 SWAP70Q9UH65 585 aa23.8■■□□□ 1.4
CPNE9-205ENST00000613455 NMT2O60551 498 aa23.79■■□□□ 1.4
CPNE9-205ENST00000613455 SHMT1P34896 483 aa23.79■■□□□ 1.4
CPNE9-205ENST00000613455 WTAPQ15007 396 aa23.79■■□□□ 1.4
CPNE9-205ENST00000613455 FAM83AQ86UY5 434 aa23.79■■□□□ 1.4
CPNE9-205ENST00000613455 ZNF444Q8N0Y2 327 aaPredicted RBP23.79■■□□□ 1.4
CPNE9-205ENST00000613455 ASTN2O75129 1339 aaPredicted RBP23.79■■□□□ 1.4
CPNE9-205ENST00000613455 EPS15P42566 896 aa23.79■■□□□ 1.4
CPNE9-205ENST00000613455 SCRN1Q12765 414 aa23.79■■□□□ 1.4
CPNE9-205ENST00000613455 METTL16Q86W50 562 aaKnown RBP23.79■■□□□ 1.4
CPNE9-205ENST00000613455 HPS5Q9UPZ3 1129 aa23.79■■□□□ 1.4
CPNE9-205ENST00000613455 ZC3H4Q9UPT8 1303 aaKnown RBP23.78■■□□□ 1.4
CPNE9-205ENST00000613455 ERICH2A1L162 156 aa23.78■■□□□ 1.4
CPNE9-205ENST00000613455 GOLGA8BA8MQT2 603 aa23.78■■□□□ 1.4
CPNE9-205ENST00000613455 APOA5Q6Q788 366 aa23.78■■□□□ 1.4
CPNE9-205ENST00000613455 IL17RBQ9NRM6 502 aa23.78■■□□□ 1.4
CPNE9-205ENST00000613455 GREB1LQ9C091 1923 aaPredicted RBP23.78■■□□□ 1.4
CPNE9-205ENST00000613455 TSPY3P0CV98 308 aa23.77■■□□□ 1.4
CPNE9-205ENST00000613455 TSPY8P0CW00 308 aa23.77■■□□□ 1.4
CPNE9-205ENST00000613455 CSRNP1Q96S65 589 aa23.77■■□□□ 1.4
CPNE9-205ENST00000613455 TMEM39BQ9GZU3 492 aa23.77■■□□□ 1.4
CPNE9-205ENST00000613455 NAP1L2Q9ULW6 460 aaPredicted RBP23.77■■□□□ 1.4
CPNE9-205ENST00000613455 PLIN4Q96Q06 1357 aa23.77■■□□□ 1.4
CPNE9-205ENST00000613455 NFXL1Q6ZNB6 911 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 CDAN1Q8IWY9 1227 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 TCP11L1Q9NUJ3 509 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 PGAP2Q9UHJ9 254 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 TAOK2Q9UL54 1235 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 FAM196BA6NMK8 535 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 RAB11FIP4Q86YS3 637 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 FOXP4Q8IVH2 680 aaPredicted RBP23.76■■□□□ 1.39
CPNE9-205ENST00000613455 TMTC2Q8N394 836 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 CRACR2BQ8N4Y2 399 aaPredicted RBP23.76■■□□□ 1.39
CPNE9-205ENST00000613455 NEDD1Q8NHV4 660 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 HACL1Q9UJ83 578 aa23.76■■□□□ 1.39
CPNE9-205ENST00000613455 SCAF8Q9UPN6 1271 aaKnown RBP23.76■■□□□ 1.39
CPNE9-205ENST00000613455 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.76■■□□□ 1.39
CPNE9-205ENST00000613455 CCDC69A6NI79 296 aa23.75■■□□□ 1.39
CPNE9-205ENST00000613455 HIRAP54198 1017 aaPredicted RBP23.75■■□□□ 1.39
CPNE9-205ENST00000613455 CCT2P78371 535 aaKnown RBP23.75■■□□□ 1.39
CPNE9-205ENST00000613455 RCSD1Q6JBY9 416 aa23.75■■□□□ 1.39
CPNE9-205ENST00000613455 NCOA5Q9HCD5 579 aaKnown RBP23.75■■□□□ 1.39
CPNE9-205ENST00000613455 NID2Q14112 1375 aa23.74■■□□□ 1.39
CPNE9-205ENST00000613455 AKR1B1P15121 316 aa23.74■■□□□ 1.39
CPNE9-205ENST00000613455 TNFAIP1Q13829 316 aa23.74■■□□□ 1.39
CPNE9-205ENST00000613455 IFIT1BQ5T764 474 aaKnown RBP23.74■■□□□ 1.39
CPNE9-205ENST00000613455 L3MBTL3Q96JM7 780 aaPredicted RBP23.74■■□□□ 1.39
CPNE9-205ENST00000613455 MYL10Q9BUA6 226 aa23.74■■□□□ 1.39
CPNE9-205ENST00000613455 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.74■■□□□ 1.39
CPNE9-205ENST00000613455 CWC22Q9HCG8 908 aaKnown RBP23.74■■□□□ 1.39
CPNE9-205ENST00000613455 SLC12A7Q9Y666 1083 aa23.74■■□□□ 1.39
CPNE9-205ENST00000613455 DTNBO60941 627 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 RASA3Q14644 834 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 TATDN1Q6P1N9 297 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 MICU3Q86XE3 530 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 ZBTB43O43298 467 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 RXRAP19793 462 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 LMOD1P29536 600 aaPredicted RBP23.73■■□□□ 1.39
CPNE9-205ENST00000613455 TNNI2P48788 182 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 DPY19L2Q6NUT2 758 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 ZNF654Q8IZM8 581 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 ANKS1AQ92625 1134 aa23.73■■□□□ 1.39
CPNE9-205ENST00000613455 DGKHQ86XP1 1220 aa23.72■■□□□ 1.39
CPNE9-205ENST00000613455 TEPSINQ96N21 525 aa23.72■■□□□ 1.39
CPNE9-205ENST00000613455 ADARB2Q9NS39 739 aaKnown RBP23.72■■□□□ 1.39
CPNE9-205ENST00000613455 HERC5Q9UII4 1024 aaKnown RBP23.72■■□□□ 1.39
CPNE9-205ENST00000613455 IGKV6D-41A0A0C4DH26 115 aa23.71■■□□□ 1.39
CPNE9-205ENST00000613455 CTDNEP1O95476 244 aa23.71■■□□□ 1.39
CPNE9-205ENST00000613455 METAP2P50579 478 aaKnown RBP eCLIP23.71■■□□□ 1.39
CPNE9-205ENST00000613455 CCDC178Q5BJE1 867 aa23.71■■□□□ 1.39
CPNE9-205ENST00000613455 ANGEL2Q5VTE6 544 aaKnown RBP23.71■■□□□ 1.39
CPNE9-205ENST00000613455 TRIM34Q9BYJ4 488 aa23.71■■□□□ 1.39
CPNE9-205ENST00000613455 CIZ1Q9ULV3 898 aaPredicted RBP23.71■■□□□ 1.39
CPNE9-205ENST00000613455 SMC3Q9UQE7 1217 aa23.71■■□□□ 1.39
CPNE9-205ENST00000613455 GLTPD2A6NH11 291 aa23.7■■□□□ 1.39
CPNE9-205ENST00000613455 NOVP48745 357 aa23.7■■□□□ 1.39
CPNE9-205ENST00000613455 RCAN1P53805 252 aa23.7■■□□□ 1.39
CPNE9-205ENST00000613455 NSUN7Q8NE18 718 aaKnown RBP23.7■■□□□ 1.39
CPNE9-205ENST00000613455 CEP95Q96GE4 821 aa23.7■■□□□ 1.39
CPNE9-205ENST00000613455 CCDC17Q96LX7 622 aa23.7■■□□□ 1.38
CPNE9-205ENST00000613455 LLPHQ9BRT6 129 aaKnown RBP23.7■■□□□ 1.38
CPNE9-205ENST00000613455 FAM217BQ9NTX9 383 aaPredicted RBP23.7■■□□□ 1.38
CPNE9-205ENST00000613455 GGA3Q9NZ52 723 aa23.7■■□□□ 1.38
CPNE9-205ENST00000613455 CHMP5Q9NZZ3 219 aa23.7■■□□□ 1.38
CPNE9-205ENST00000613455 GOLGA8AA7E2F4 631 aa23.69■■□□□ 1.38
CPNE9-205ENST00000613455 JAK2O60674 1132 aa23.69■■□□□ 1.38
CPNE9-205ENST00000613455 GJB2P29033 226 aa23.69■■□□□ 1.38
CPNE9-205ENST00000613455 CDC27P30260 824 aa23.69■■□□□ 1.38
CPNE9-205ENST00000613455 SHROOM1Q2M3G4 852 aaPredicted RBP23.69■■□□□ 1.38
CPNE9-205ENST00000613455 CERKLQ49MI3 558 aaPredicted RBP23.69■■□□□ 1.38
CPNE9-205ENST00000613455 SYNE3Q6ZMZ3 975 aa23.69■■□□□ 1.38
CPNE9-205ENST00000613455 APOBEC3FQ8IUX4 373 aaKnown RBP23.69■■□□□ 1.38
CPNE9-205ENST00000613455 CCDC144CPQ8IYA2 1237 aa23.69■■□□□ 1.38
CPNE9-205ENST00000613455 DEFB129Q9H1M3 183 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms