RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 CD99L2Q8TCZ2 262 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 SDR42E1Q8WUS8 393 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 APPBP2Q92624 585 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 FEZ1Q99689 392 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 R3HDMLQ9H3Y0 253 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 SWAP70Q9UH65 585 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 AGTPBP1Q9UPW5 1226 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 SLC4A4Q9Y6R1 1079 aa14.82□□□□□ -0.04
CBWD1-221ENST00000613355 C19orf81C9J6K1 198 aa14.81□□□□□ -0.04
CBWD1-221ENST00000613355 RNF113AO15541 343 aaKnown RBP14.81□□□□□ -0.04
CBWD1-221ENST00000613355 GDF11O95390 407 aa14.81□□□□□ -0.04
CBWD1-221ENST00000613355 HOXD10P28358 340 aa14.81□□□□□ -0.04
CBWD1-221ENST00000613355 ZBTB21Q9ULJ3 1066 aa14.81□□□□□ -0.04
CBWD1-221ENST00000613355 USP17L10C9JJH3 530 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 MPHOSPH10O00566 681 aaKnown RBP14.8□□□□□ -0.04
CBWD1-221ENST00000613355 RAB3GAP1Q15042 981 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 ABCB5Q2M3G0 1257 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 TSHZ3Q63HK5 1081 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 EXOC6Q8TAG9 804 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 WDR18Q9BV38 432 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 DCP1AQ9NPI6 582 aaPredicted RBP14.8□□□□□ -0.04
CBWD1-221ENST00000613355 ARPP21Q9UBL0 812 aaPredicted RBP14.8□□□□□ -0.04
CBWD1-221ENST00000613355 MYH8P13535 1937 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
CBWD1-221ENST00000613355 PTPRFP10586 1907 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 GH2P01242 217 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 APPP05067 770 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 SLURP2P0DP57 97 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 USP14P54578 494 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 HMGCS2P54868 508 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 PRMT2P55345 433 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 IRX3P78415 501 aaPredicted RBP14.79□□□□□ -0.04
CBWD1-221ENST00000613355 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 OTOP1Q7RTM1 612 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 ZNF287Q9HBT7 754 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
CBWD1-221ENST00000613355 BACE1P56817 501 aa14.78□□□□□ -0.04
CBWD1-221ENST00000613355 LACTBP83111 547 aaPredicted RBP14.78□□□□□ -0.04
CBWD1-221ENST00000613355 MTMR2Q13614 643 aa14.78□□□□□ -0.04
CBWD1-221ENST00000613355 B4GALNT3Q6L9W6 998 aa14.78□□□□□ -0.04
CBWD1-221ENST00000613355 NBPF11Q86T75 865 aa14.78□□□□□ -0.04
CBWD1-221ENST00000613355 CCDC84Q86UT8 332 aaPredicted RBP14.78□□□□□ -0.04
CBWD1-221ENST00000613355 EVI5LQ96CN4 794 aa14.78□□□□□ -0.04
CBWD1-221ENST00000613355 DNAJC18Q9H819 358 aa14.78□□□□□ -0.04
CBWD1-221ENST00000613355 HPS5Q9UPZ3 1129 aa14.78□□□□□ -0.04
CBWD1-221ENST00000613355 FMNL1O95466 1100 aaPredicted RBP14.77□□□□□ -0.04
CBWD1-221ENST00000613355 GCLCP48506 637 aaPredicted RBP14.77□□□□□ -0.04
CBWD1-221ENST00000613355 TDO2P48775 406 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 PLCD1P51178 756 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 FCGRTP55899 365 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 SH3D19Q5HYK7 790 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 GPAT2Q6NUI2 795 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 GIMAP6Q6P9H5 292 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 PI4K2BQ8TCG2 481 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 CCDC17Q96LX7 622 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 LNPKQ9C0E8 428 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 PUS7LQ9H0K6 701 aaKnown RBP14.77□□□□□ -0.04
CBWD1-221ENST00000613355 SH2D4AQ9H788 454 aa14.77□□□□□ -0.04
CBWD1-221ENST00000613355 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.77□□□□□ -0.04
CBWD1-221ENST00000613355 DDX60LQ5H9U9 1706 aaKnown RBP14.77□□□□□ -0.05
CBWD1-221ENST00000613355 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
CBWD1-221ENST00000613355 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
CBWD1-221ENST00000613355 CYP2C8P10632 490 aa14.76□□□□□ -0.05
CBWD1-221ENST00000613355 PDE1AP54750 535 aa14.76□□□□□ -0.05
CBWD1-221ENST00000613355 C17orf99Q6UX52 265 aa14.76□□□□□ -0.05
CBWD1-221ENST00000613355 SMC5Q8IY18 1101 aa14.76□□□□□ -0.05
CBWD1-221ENST00000613355 GTF3C2Q8WUA4 911 aaPredicted RBP14.76□□□□□ -0.05
CBWD1-221ENST00000613355 PTPN22Q9Y2R2 807 aa14.76□□□□□ -0.05
CBWD1-221ENST00000613355 LOC285556D6RIA3 1793 aa14.76□□□□□ -0.05
CBWD1-221ENST00000613355 BAZ2AQ9UIF9 1905 aaKnown RBP14.76□□□□□ -0.05
CBWD1-221ENST00000613355 USP17L12C9JPN9 530 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 USP17L21D6R901 530 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 GPAA1O43292 621 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 PRKAB2O43741 272 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 PSMC4P43686 418 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 MOGSQ13724 837 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 CHD1LQ86WJ1 897 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 TICAM2Q86XR7 235 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 CCAR1Q8IX12 1150 aaKnown RBP14.75□□□□□ -0.05
CBWD1-221ENST00000613355 STRBPQ96SI9 672 aaKnown RBP14.75□□□□□ -0.05
CBWD1-221ENST00000613355 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 ARHGEF10LQ9HCE6 1279 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 SHMT1P34896 483 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 RRP1BQ14684 758 aaKnown RBP14.75□□□□□ -0.05
CBWD1-221ENST00000613355 SLFNL1Q499Z3 407 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 SLC9C1Q4G0N8 1177 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 C12orf60Q5U649 245 aa14.75□□□□□ -0.05
CBWD1-221ENST00000613355 OTUD7AQ8TE49 926 aaPredicted RBP14.75□□□□□ -0.05
CBWD1-221ENST00000613355 MINDY4BA8MYZ0 360 aa14.74□□□□□ -0.05
CBWD1-221ENST00000613355 MFAP1P55081 439 aaKnown RBP14.74□□□□□ -0.05
CBWD1-221ENST00000613355 GABPAQ06546 454 aa14.74□□□□□ -0.05
CBWD1-221ENST00000613355 ZYXQ15942 572 aaKnown RBP14.74□□□□□ -0.05
CBWD1-221ENST00000613355 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
CBWD1-221ENST00000613355 RAET1EQ8TD07 263 aa14.74□□□□□ -0.05
CBWD1-221ENST00000613355 OSBP2Q969R2 916 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms