RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ERCC3P19447 782 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 SYT1P21579 422 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 MCAMP43121 646 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 SLC15A2Q16348 729 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 WASF1Q92558 559 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 KCNF1Q9H3M0 494 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 PIH1D3Q9NQM4 214 aaKnown RBP12.34□□□□□ -0.43
FAM3A-221ENST00000612856 SH2B1Q9NRF2 756 aaPredicted RBP12.34□□□□□ -0.43
FAM3A-221ENST00000612856 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 FAM170AA1A519 330 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 ANKRD65E5RJM6 399 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 DDX39AO00148 427 aaKnown RBP12.34□□□□□ -0.43
FAM3A-221ENST00000612856 SNW1Q13573 536 aaKnown RBP12.34□□□□□ -0.43
FAM3A-221ENST00000612856 UBE4AQ14139 1066 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 KMT5BQ4FZB7 885 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 IFNL3Q8IZI9 196 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 FSIP1Q8NA03 581 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.34□□□□□ -0.43
FAM3A-221ENST00000612856 MCM7P33993 719 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 UBA7P41226 1012 aa12.34□□□□□ -0.43
FAM3A-221ENST00000612856 NPR1P16066 1061 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 AKNAD1Q5T1N1 836 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 CHD2O14647 1828 aaKnown RBP12.33□□□□□ -0.44
FAM3A-221ENST00000612856 CYP2D6P10635 497 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 ARID5BQ14865 1188 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 LETM2Q2VYF4 491 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 DNAI1Q9UI46 699 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 MYCLP12524 364 aaPredicted RBP12.33□□□□□ -0.44
FAM3A-221ENST00000612856 COL9A3Q14050 684 aaPredicted RBP12.33□□□□□ -0.44
FAM3A-221ENST00000612856 MAEAQ7L5Y9 396 aa12.33□□□□□ -0.44
FAM3A-221ENST00000612856 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
FAM3A-221ENST00000612856 SALL3Q9BXA9 1300 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 PHACTR2O75167 634 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 CAMTA2O94983 1202 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 SERPINC1P01008 464 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 DPEP1P16444 411 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 GYS2P54840 703 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 SNAP25P60880 206 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 CLEC17AQ6ZS10 378 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 SUPT20HQ8NEM7 779 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 SLC16A2P36021 539 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 GPSM2P81274 684 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 MCM6Q14566 821 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
FAM3A-221ENST00000612856 ANKRD7Q92527 254 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 E7EWF7 191 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 F13A1P00488 732 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 CYP2E1P05181 493 aaPredicted RBP12.32□□□□□ -0.44
FAM3A-221ENST00000612856 GNAT2P19087 354 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 KLRK1P26718 216 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 UBXN2AP68543 259 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
FAM3A-221ENST00000612856 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
FAM3A-221ENST00000612856 OVOS2A0A0G2JMS6 1433 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 A0A087WWV3 80 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 PATL2C9JE40 543 aaKnown RBP12.31□□□□□ -0.44
FAM3A-221ENST00000612856 TRIM66O15016 1216 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 TPM1P09493 284 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 CEP57L1Q8IYX8 460 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 CACTINQ8WUQ7 758 aaKnown RBP12.31□□□□□ -0.44
FAM3A-221ENST00000612856 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 MECOMQ03112 1051 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 PPARAQ07869 468 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
FAM3A-221ENST00000612856 ZNF174Q15697 407 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 HSP90B2PQ58FF3 399 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 STAMQ92783 540 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 CCDC102AQ96A19 550 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 PARP1P09874 1014 aaKnown RBP12.31□□□□□ -0.44
FAM3A-221ENST00000612856 ANAPC15P60006 121 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 E2F4Q16254 413 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 GADL1Q6ZQY3 521 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
FAM3A-221ENST00000612856 SLC4A9Q96Q91 983 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 HAUS7Q99871 368 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
FAM3A-221ENST00000612856 ZSCAN26Q16670 478 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 SRRTQ9BXP5 876 aaKnown RBP12.3□□□□□ -0.44
FAM3A-221ENST00000612856 HELLSQ9NRZ9 838 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 ABT1Q9ULW3 272 aaKnown RBP12.3□□□□□ -0.44
FAM3A-221ENST00000612856 NCOA3Q9Y6Q9 1424 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 M0R2C6 588 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms