RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 TXNRD2Q9NNW7 524 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 HMG20BQ9P0W2 317 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 LTBP2Q14767 1821 aa21.22■□□□□ 0.99
CSNK1E-215ENST00000612795 MYO5AQ9Y4I1 1855 aaKnown RBP21.22■□□□□ 0.99
CSNK1E-215ENST00000612795 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
CSNK1E-215ENST00000612795 TBC1D9Q6ZT07 1266 aa21.22■□□□□ 0.99
CSNK1E-215ENST00000612795 APBA2Q99767 749 aa21.22■□□□□ 0.99
CSNK1E-215ENST00000612795 PAGR1Q9BTK6 254 aa21.22■□□□□ 0.99
CSNK1E-215ENST00000612795 PI4KBQ9UBF8 816 aa21.22■□□□□ 0.99
CSNK1E-215ENST00000612795 ERVK-9P63128 1117 aa21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 ERVK-24P63145 666 aa21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 CCL14Q16627 93 aa21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 GPR142Q7Z601 462 aa21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 SH3RF3Q8TEJ3 882 aaPredicted RBP21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 LBHD1Q9BQE6 289 aaPredicted RBP21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 DHX36Q9H2U1 1008 aaKnown RBP21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 MYH1P12882 1939 aa21.21■□□□□ 0.99
CSNK1E-215ENST00000612795 C19orf81C9J6K1 198 aa21.2■□□□□ 0.98
CSNK1E-215ENST00000612795 USP17L10C9JJH3 530 aa21.2■□□□□ 0.98
CSNK1E-215ENST00000612795 CRACR2BQ8N4Y2 399 aaPredicted RBP21.2■□□□□ 0.98
CSNK1E-215ENST00000612795 GTF3C2Q8WUA4 911 aaPredicted RBP21.2■□□□□ 0.98
CSNK1E-215ENST00000612795 MEIS3Q99687 375 aa21.2■□□□□ 0.98
CSNK1E-215ENST00000612795 PORCNQ9H237 461 aa21.2■□□□□ 0.98
CSNK1E-215ENST00000612795 LRP2BPQ9P2M1 347 aa21.2■□□□□ 0.98
CSNK1E-215ENST00000612795 SRGAP3O43295 1099 aa21.19■□□□□ 0.98
CSNK1E-215ENST00000612795 LHX8Q68G74 356 aa21.19■□□□□ 0.98
CSNK1E-215ENST00000612795 PLEKHH3Q7Z736 793 aa21.19■□□□□ 0.98
CSNK1E-215ENST00000612795 FAM161BQ96MY7 647 aa21.19■□□□□ 0.98
CSNK1E-215ENST00000612795 API5Q9BZZ5 524 aaKnown RBP21.19■□□□□ 0.98
CSNK1E-215ENST00000612795 RBPJLQ9UBG7 517 aa21.19■□□□□ 0.98
CSNK1E-215ENST00000612795 GDF11O95390 407 aa21.18■□□□□ 0.98
CSNK1E-215ENST00000612795 MORN1Q5T089 497 aa21.18■□□□□ 0.98
CSNK1E-215ENST00000612795 FAM109BQ6ICB4 259 aaPredicted RBP21.18■□□□□ 0.98
CSNK1E-215ENST00000612795 USP6NLQ92738 828 aa21.18■□□□□ 0.98
CSNK1E-215ENST00000612795 GUCD1Q96NT3 240 aa21.18■□□□□ 0.98
CSNK1E-215ENST00000612795 AATFQ9NY61 560 aaKnown RBP eCLIP21.18■□□□□ 0.98
CSNK1E-215ENST00000612795 BAG3O95817 575 aa21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 PLCG2P16885 1265 aa21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 ARID4AP29374 1257 aaPredicted RBP21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 SLFN5Q08AF3 891 aa21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 ZNF697Q5TEC3 545 aa21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 MAPKAPK5Q8IW41 473 aa21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 SENP6Q9GZR1 1112 aaPredicted RBP21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 PRKAG2Q9UGJ0 569 aa21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 ZBTB21Q9ULJ3 1066 aa21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 NOB1Q9ULX3 412 aaKnown RBP21.17■□□□□ 0.98
CSNK1E-215ENST00000612795 RLFQ13129 1914 aa21.16■□□□□ 0.98
CSNK1E-215ENST00000612795 JAG1P78504 1218 aa21.16■□□□□ 0.98
CSNK1E-215ENST00000612795 Q3C1V9 767 aa21.16■□□□□ 0.98
CSNK1E-215ENST00000612795 WDR78Q5VTH9 848 aa21.16■□□□□ 0.98
CSNK1E-215ENST00000612795 NAA16Q6N069 864 aaPredicted RBP21.16■□□□□ 0.98
CSNK1E-215ENST00000612795 DNAJC18Q9H819 358 aa21.16■□□□□ 0.98
CSNK1E-215ENST00000612795 GINM1Q9NU53 330 aa21.16■□□□□ 0.98
CSNK1E-215ENST00000612795 FLT1P17948 1338 aa21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 POTEB2H3BUK9 544 aa21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 GLRX3O76003 335 aaKnown RBP21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 MCAMP43121 646 aa21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 MAP2K5Q13163 448 aa21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 SHROOM1Q2M3G4 852 aaPredicted RBP21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 MFSD14CQ5VZR4 134 aa21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 TGFBRAP1Q8WUH2 860 aa21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 FEZ1Q99689 392 aa21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.15■□□□□ 0.98
CSNK1E-215ENST00000612795 UQCRFS1P1P0C7P4 283 aa21.14■□□□□ 0.97
CSNK1E-215ENST00000612795 ATN1P54259 1190 aaPredicted RBP21.14■□□□□ 0.97
CSNK1E-215ENST00000612795 CCNA1P78396 465 aa21.14■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L2Q6R6M4 530 aa21.14■□□□□ 0.97
CSNK1E-215ENST00000612795 FOXP4Q8IVH2 680 aaPredicted RBP21.14■□□□□ 0.97
CSNK1E-215ENST00000612795 MSCO60682 206 aa21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 HLA-DOAP06340 250 aa21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 GNAI3P08754 354 aa21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 CNGA1P29973 690 aa21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 EDC3Q96F86 508 aaKnown RBP21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 EMILIN3Q9NT22 766 aa21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 DDX20Q9UHI6 824 aaKnown RBP21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 PALD1Q9ULE6 856 aa21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 NDUFB9Q9Y6M9 179 aa21.13■□□□□ 0.97
CSNK1E-215ENST00000612795 DNAH12Q6ZR08 3092 aa21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 MTX1Q13505 466 aa21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 ZYXQ15942 572 aaKnown RBP21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 ATF7IPQ6VMQ6 1270 aa21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 METTL16Q86W50 562 aaKnown RBP21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 SAP30BPQ9UHR5 308 aaKnown RBP21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 RABGAP1Q9Y3P9 1069 aa21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 IVNS1ABPQ9Y6Y0 642 aa21.12■□□□□ 0.97
CSNK1E-215ENST00000612795 LPAR1Q92633 364 aa21.11■□□□□ 0.97
CSNK1E-215ENST00000612795 CDCA7LQ96GN5 454 aa21.11■□□□□ 0.97
CSNK1E-215ENST00000612795 SNRKQ9NRH2 765 aa21.11■□□□□ 0.97
CSNK1E-215ENST00000612795 FLRT1Q9NZU1 646 aa21.11■□□□□ 0.97
CSNK1E-215ENST00000612795 LAMA2P24043 3122 aaKnown RBP21.11■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L15C9J2P7 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L13C9JLJ4 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L11C9JVI0 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L18D6R9N7 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L22D6RA61 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L17D6RBQ6 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L19D6RCP7 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L20D6RJB6 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 DNM1LO00429 736 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms