RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 RNF113AO15541 343 aaKnown RBP8.66□□□□□ -1.02
CBWD1-219ENST00000611457 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
CBWD1-219ENST00000611457 SNHG28P0DPA3 235 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 MORN1Q5T089 497 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 MAGEB6Q8N7X4 407 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 PANK1Q8TE04 598 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 DSCC1Q9BVC3 393 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 TDRD3Q9H7E2 651 aaKnown RBP8.66□□□□□ -1.02
CBWD1-219ENST00000611457 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
CBWD1-219ENST00000611457 WDR81Q562E7 1941 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 USP17L5A8MUK1 530 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 GPR25O00155 361 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 ZAP70P43403 619 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 OPTNQ96CV9 577 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 GMCL1Q96IK5 515 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 PTPN22Q9Y2R2 807 aa8.66□□□□□ -1.02
CBWD1-219ENST00000611457 A0A1W2PPC1 479 aa8.65□□□□□ -1.02
CBWD1-219ENST00000611457 IGF2BP3O00425 579 aaKnown RBP eCLIP8.65□□□□□ -1.02
CBWD1-219ENST00000611457 TMEM179Q6ZVK1 233 aa8.65□□□□□ -1.02
CBWD1-219ENST00000611457 VPS37DQ86XT2 251 aa8.65□□□□□ -1.02
CBWD1-219ENST00000611457 CRNKL1Q9BZJ0 848 aaKnown RBP8.65□□□□□ -1.02
CBWD1-219ENST00000611457 RWDD1Q9H446 243 aaPredicted RBP8.65□□□□□ -1.02
CBWD1-219ENST00000611457 ZFYVE28Q9HCC9 887 aa8.65□□□□□ -1.02
CBWD1-219ENST00000611457 TMX2Q9Y320 296 aa8.65□□□□□ -1.02
CBWD1-219ENST00000611457 CNMDO75829 334 aa8.65□□□□□ -1.02
CBWD1-219ENST00000611457 ZNF157P51786 506 aaPredicted RBP8.65□□□□□ -1.02
CBWD1-219ENST00000611457 DZIP1Q86YF9 867 aaKnown RBP8.65□□□□□ -1.02
CBWD1-219ENST00000611457 SH2D4AQ9H788 454 aa8.65□□□□□ -1.02
CBWD1-219ENST00000611457 DCP1AQ9NPI6 582 aaPredicted RBP8.65□□□□□ -1.02
CBWD1-219ENST00000611457 TLR7Q9NYK1 1049 aaKnown RBP8.65□□□□□ -1.02
CBWD1-219ENST00000611457 TIMM10P62072 90 aa8.65□□□□□ -1.03
CBWD1-219ENST00000611457 MAP3K20Q9NYL2 800 aaKnown RBP8.65□□□□□ -1.03
CBWD1-219ENST00000611457 CSADQ9Y600 493 aa8.65□□□□□ -1.03
CBWD1-219ENST00000611457 MYH15Q9Y2K3 1946 aa8.65□□□□□ -1.03
CBWD1-219ENST00000611457 DDTLA6NHG4 134 aaPredicted RBP8.64□□□□□ -1.03
CBWD1-219ENST00000611457 MFAP1P55081 439 aaKnown RBP8.64□□□□□ -1.03
CBWD1-219ENST00000611457 CYP4F22Q6NT55 531 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 SH3RF3Q8TEJ3 882 aaPredicted RBP8.64□□□□□ -1.03
CBWD1-219ENST00000611457 PATL2C9JE40 543 aaKnown RBP8.64□□□□□ -1.03
CBWD1-219ENST00000611457 STAG1Q8WVM7 1258 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 SOCS4Q8WXH5 440 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 ZBTB21Q9ULJ3 1066 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 BACE1P56817 501 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 CCDC96Q2M329 555 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 PIAS4Q8N2W9 510 aaPredicted RBP8.64□□□□□ -1.03
CBWD1-219ENST00000611457 ZNF280CQ8ND82 737 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 ZNF333Q96JL9 665 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 TTC14Q96N46 770 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 TMEM39BQ9GZU3 492 aa8.64□□□□□ -1.03
CBWD1-219ENST00000611457 SIP14410 1827 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 MAGEB6P1A0A0J9YX57 407 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 WDR46O15213 610 aaKnown RBP8.63□□□□□ -1.03
CBWD1-219ENST00000611457 HLA-DOAP06340 250 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 NFIAQ12857 509 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 CATSPERGQ6ZRH7 1159 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 AACSQ86V21 672 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 SLAIN1Q8ND83 568 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 MTMR8Q96EF0 704 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 ALDH8A1Q9H2A2 487 aaPredicted RBP8.63□□□□□ -1.03
CBWD1-219ENST00000611457 PRO3102Q9H379 93 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 CLEC11AQ9Y240 323 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 PDE1AP54750 535 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 C20orf194Q5TEA3 1177 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 ZNF287Q9HBT7 754 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 RABGAP1Q9Y3P9 1069 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 PCDHAC2Q9Y5I4 1007 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 MYH6P13533 1939 aa8.63□□□□□ -1.03
CBWD1-219ENST00000611457 GSG1L2A8MUP6 293 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 BTBD19C9JJ37 291 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 MX1P20591 662 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 SNX17Q15036 470 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 NOL10Q9BSC4 688 aaKnown RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 PAK6Q9NQU5 681 aaPredicted RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 SLC15A5A6NIM6 579 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 SNAP23O00161 211 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 LACTBP83111 547 aaPredicted RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 MAMDC4Q6UXC1 1216 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 SIAH1Q8IUQ4 282 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 TEX11Q8IYF3 940 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 UPF3AQ9H1J1 476 aaKnown RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 GJD2Q9UKL4 321 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 CHMP3Q9Y3E7 222 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 RBM47A0AV96 593 aaKnown RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 GRB14Q14449 540 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 RRP1BQ14684 758 aaKnown RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 PLEKHM2Q8IWE5 1019 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 SERPINB13Q9UIV8 391 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 ABT1Q9ULW3 272 aaKnown RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 ANGEL1Q9UNK9 670 aaKnown RBP8.62□□□□□ -1.03
CBWD1-219ENST00000611457 ZNF532Q9HCE3 1301 aa8.62□□□□□ -1.03
CBWD1-219ENST00000611457 AOC2O75106 756 aa8.61□□□□□ -1.03
CBWD1-219ENST00000611457 IFIT2P09913 472 aaKnown RBP8.61□□□□□ -1.03
CBWD1-219ENST00000611457 MAPK4P31152 587 aa8.61□□□□□ -1.03
CBWD1-219ENST00000611457 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms