RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 CNNM3Q8NE01 707 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 ZNF384Q8TF68 577 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 CCDC34Q96HJ3 373 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
PABPC1-224ENST00000610907 FBXO2Q9UK22 296 aaPredicted RBP12□□□□□ -0.49
PABPC1-224ENST00000610907 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 NHSQ6T4R5 1651 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 DLEC1Q9Y238 1755 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 USP17L12C9JPN9 530 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 USP17L21D6R901 530 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 GNPATO15228 680 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 CBFA2T2O43439 604 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 TM4SF1P30408 202 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 PDE4BQ07343 736 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 TROAPQ12815 778 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 NCAPHQ15003 741 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 CCDC178Q5BJE1 867 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 CT47A1Q5JQC4 288 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-224ENST00000610907 CCDC150Q8NCX0 1101 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 ERCC4Q92889 916 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-224ENST00000610907 PHF20Q9BVI0 1012 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 BRMS1Q9HCU9 246 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-224ENST00000610907 KCNJ14Q9UNX9 436 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 PAXBP1Q9Y5B6 917 aa11.99□□□□□ -0.49
PABPC1-224ENST00000610907 NRDCO43847 1150 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 KRT2P35908 639 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 KCNJ6P48051 423 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 MDM2Q00987 491 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-224ENST00000610907 MYL5Q02045 173 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 PKN1Q16512 942 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 LONRF3Q496Y0 759 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 NT5DC1Q5TFE4 455 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 C15orf52Q6ZUT6 534 aaKnown RBP11.98□□□□□ -0.49
PABPC1-224ENST00000610907 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 TRIML1Q8N9V2 468 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
PABPC1-224ENST00000610907 C8orf37Q96NL8 207 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 CLIC6Q96NY7 704 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 DCP1AQ9NPI6 582 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-224ENST00000610907 DACH1Q9UI36 760 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 MAST2Q6P0Q8 1798 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 BTAF1O14981 1849 aa11.98□□□□□ -0.49
PABPC1-224ENST00000610907 WTIPA6NIX2 430 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-224ENST00000610907 TRIM75PA6NK02 468 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 UBE2Q2LH0YL09 131 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 BIN1O00499 593 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 SKILP12757 684 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 TAF1P21675 1872 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 GSTO1P78417 241 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 TMTC3Q6ZXV5 915 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 METTL16Q86W50 562 aaKnown RBP11.97□□□□□ -0.49
PABPC1-224ENST00000610907 MLKLQ8NB16 471 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 CTCFLQ8NI51 663 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-224ENST00000610907 FERMT2Q96AC1 680 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 AATFQ9NY61 560 aaKnown RBP eCLIP11.97□□□□□ -0.49
PABPC1-224ENST00000610907 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
PABPC1-224ENST00000610907 MYH13Q9UKX3 1938 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 IRS2Q9Y4H2 1338 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 MYH6P13533 1939 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 CCDC88AQ3V6T2 1871 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 KIAA1551Q9HCM1 1747 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 THSD7AQ9UPZ6 1657 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 SPATA31A6Q5VVP1 1343 aa11.97□□□□□ -0.49
PABPC1-224ENST00000610907 A0A087WWV3 80 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-224ENST00000610907 KIF2AO00139 706 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-224ENST00000610907 TUBB4AP04350 444 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 ADRA2BP18089 450 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 PNOCQ13519 176 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-224ENST00000610907 TRAPPC3LQ5T215 181 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 CCDC82Q8N4S0 544 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 ANKS1AQ92625 1134 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 XPO4Q9C0E2 1151 aaKnown RBP11.96□□□□□ -0.49
PABPC1-224ENST00000610907 CABP5Q9NP86 173 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 IFNKQ9P0W0 207 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 PCDHA5Q9Y5H7 936 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-224ENST00000610907 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.49
PABPC1-224ENST00000610907 BAZ2AQ9UIF9 1905 aaKnown RBP11.96□□□□□ -0.5
PABPC1-224ENST00000610907 SMC2O95347 1197 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 LDHCP07864 332 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 TNNT1P13805 278 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 KIF5BP33176 963 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 RFC4P35249 363 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 TRAPPC10P48553 1259 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 SARSP49591 514 aaKnown RBP11.96□□□□□ -0.5
PABPC1-224ENST00000610907 KCNQ4P56696 695 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 PPP4CP60510 307 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 CCZ1BP86790 482 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 CCZ1P86791 482 aaPredicted RBP11.96□□□□□ -0.5
PABPC1-224ENST00000610907 FANCCQ00597 558 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 NR5A1Q13285 461 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 GRAPQ13588 217 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 POSTNQ15063 836 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 DGKHQ86XP1 1220 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms