RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 KIF28PB7ZC32 967 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 VEGFAP15692 232 aaPredicted RBP21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 HMGN5P82970 282 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 SLC16A10Q8TF71 515 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 TEKT1Q969V4 418 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 ALG1Q9BT22 464 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 CPVLQ9H3G5 476 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 COL4A5P29400 1685 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 FGRP09769 529 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 IARSP41252 1262 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 CDK8P49336 464 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 RTN1Q16799 776 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 RCSD1Q6JBY9 416 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 FAM163AQ96GL9 167 aaPredicted RBP21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 TDRD3Q9H7E2 651 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 KCNJ14Q9UNX9 436 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 BCS1LQ9Y276 419 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 TIAM2Q8IVF5 1701 aa21.22■□□□□ 0.99
SNAPC3-207ENST00000610884 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 SHTN1A0MZ66 631 aa21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 DHX16O60231 1041 aaKnown RBP21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 TSPY3P0CV98 308 aa21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 TSPY8P0CW00 308 aa21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 STRIP1Q5VSL9 837 aa21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 NBPF11Q86T75 865 aa21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 NLGN2Q8NFZ4 835 aa21.21■□□□□ 0.99
SNAPC3-207ENST00000610884 RASA1P20936 1047 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 CCDC173Q0VFZ6 552 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 CCDC93Q567U6 631 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 PIM2Q9P1W9 311 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 MAST2Q6P0Q8 1798 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 PSMD14O00487 310 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 SLC3A2P08195 630 aaKnown RBP21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 GOLGA8HP0CJ92 632 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 POLD1P28340 1107 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 PRMT6Q96LA8 375 aaPredicted RBP21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 SNED1Q8TER0 1413 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 KIAA1551Q9HCM1 1747 aa21.2■□□□□ 0.98
SNAPC3-207ENST00000610884 CDK5RAP2Q96SN8 1893 aa21.19■□□□□ 0.98
SNAPC3-207ENST00000610884 ORC4O43929 436 aa21.19■□□□□ 0.98
SNAPC3-207ENST00000610884 TROAPQ12815 778 aa21.19■□□□□ 0.98
SNAPC3-207ENST00000610884 SLF2Q8IX21 1173 aa21.19■□□□□ 0.98
SNAPC3-207ENST00000610884 FBXO18Q8NFZ0 1043 aa21.19■□□□□ 0.98
SNAPC3-207ENST00000610884 CLRN2A0PK11 232 aa21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 STAG2Q8N3U4 1231 aa21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 ATP6V1DQ9Y5K8 247 aa21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 CCDC125Q86Z20 511 aa21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 ZSCAN29Q8IWY8 852 aaPredicted RBP21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 AMOTL1Q8IY63 956 aa21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 SHISA4Q96DD7 197 aa21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 USP28Q96RU2 1077 aa21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 V9GY48 417 aaPredicted RBP21.18■□□□□ 0.98
SNAPC3-207ENST00000610884 SYCE3A1L190 88 aa21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 DDTLA6NHG4 134 aaPredicted RBP21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 SSRP1Q08945 709 aaKnown RBP21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 ZSCAN23Q3MJ62 389 aa21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 KRT40Q6A162 431 aa21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 CATIPQ7Z7H3 387 aa21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 ANP32BQ92688 251 aaKnown RBP21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 KRT85P78386 507 aa21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 SPATA32Q96LK8 384 aa21.17■□□□□ 0.98
SNAPC3-207ENST00000610884 PLCG2P16885 1265 aa21.16■□□□□ 0.98
SNAPC3-207ENST00000610884 CRACR2BQ8N4Y2 399 aaPredicted RBP21.16■□□□□ 0.98
SNAPC3-207ENST00000610884 DALRD3Q5D0E6 543 aaKnown RBP21.16■□□□□ 0.98
SNAPC3-207ENST00000610884 SRBD1Q8N5C6 995 aaKnown RBP21.16■□□□□ 0.98
SNAPC3-207ENST00000610884 PPP1R9BQ96SB3 815 aa21.16■□□□□ 0.98
SNAPC3-207ENST00000610884 RASSF7Q02833 373 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 CFAP100Q494V2 611 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 RTKN2Q8IZC4 609 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 LEO1Q8WVC0 666 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 QSER1Q2KHR3 1735 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 ADAMTS3O15072 1205 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 ZBTB22O15209 634 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 AKR1B1P15121 316 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 CDAN1Q8IWY9 1227 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 TMTC2Q8N394 836 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 CEP95Q96GE4 821 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 VPS54Q9P1Q0 977 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 FAM198AQ9UFP1 575 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 CLIC4Q9Y696 253 aa21.15■□□□□ 0.98
SNAPC3-207ENST00000610884 TCP10L2B9ZVM9 353 aa21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 RBM26Q5T8P6 1007 aaKnown RBP21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 HHIPL2Q6UWX4 724 aa21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 C16orf86Q6ZW13 317 aa21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 SH3BP5LQ7L8J4 393 aa21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 PNMA1Q8ND90 353 aa21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 OXER1Q8TDS5 423 aa21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 PGBD1Q96JS3 809 aa21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 OSBPL5Q9H0X9 879 aaPredicted RBP21.14■□□□□ 0.98
SNAPC3-207ENST00000610884 MYH1P12882 1939 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 NAV1Q8NEY1 1877 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 BTBD18B2RXH4 712 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 IFNAR1P17181 557 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 PTGER2P43116 358 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 CPLX2Q6PUV4 134 aaKnown RBP21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 ZDHHC15Q96MV8 337 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 TMEM47Q9BQJ4 181 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms